RNA–Protein interactions for RNA: ENST00000248151.4

TUBBP1-201, Transcript of tubulin beta pseudogene 1, humanhuman

BASIC

Gene TUBBP1, Length 1,335 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP1-201ENST00000248151 CCDC127Q96BQ5 260 aa12.05□□□□□ -0.48
TUBBP1-201ENST00000248151 NUP62CLQ9H1M0 184 aa12.05□□□□□ -0.48
TUBBP1-201ENST00000248151 ENTPD7Q9NQZ7 604 aa12.05□□□□□ -0.48
TUBBP1-201ENST00000248151 SLC38A7Q9NVC3 462 aa12.05□□□□□ -0.48
TUBBP1-201ENST00000248151 ADAM28Q9UKQ2 775 aa12.05□□□□□ -0.48
TUBBP1-201ENST00000248151 TRAF3IP3Q9Y228 551 aa12.05□□□□□ -0.48
TUBBP1-201ENST00000248151 MTCL1Q9Y4B5 1905 aaKnown RBP12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 FSCN2O14926 492 aa12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 KIF20AO95235 890 aa12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 NRIP1P48552 1158 aa12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 SNRPFP62306 86 aaKnown RBP12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 RBM10P98175 930 aaKnown RBP12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 UBE3AQ05086 875 aa12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 CYP24A1Q07973 514 aa12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 ADAM9Q13443 819 aa12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 SKIV2LQ15477 1246 aaKnown RBP12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 SNRNP35Q16560 246 aaKnown RBP12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 FAM171A1Q5VUB5 890 aa12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 SPATA1Q5VX52 437 aa12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 GLYCTKQ8IVS8 523 aa12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 C12orf56Q8IXR9 622 aa12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 OR5B17Q8NGF7 314 aa12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 ZNF516Q92618 1163 aa12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 FBXL18Q96ME1 805 aa12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 LMAN2LQ9H0V9 348 aa12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 ASB7Q9H672 318 aa12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 DPP3Q9NY33 737 aa12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 LMCD1Q9NZU5 365 aa12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 UBQLN1Q9UMX0 589 aaKnown RBP12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 LZTS1Q9Y250 596 aa12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 PTPRJQ12913 1337 aa12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 EYSQ5T1H1 3165 aa12.04□□□□□ -0.48
TUBBP1-201ENST00000248151 PLXNA3P51805 1871 aa12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 TCF20Q9UGU0 1960 aaKnown RBP12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 C2orf71A6NGG8 1288 aa12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 KIAA0391O15091 583 aaKnown RBP12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 LINC01565O15544 149 aa12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 IL18RAPO95256 599 aa12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 EFEMP2O95967 443 aa12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 DLATP10515 647 aaKnown RBP12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 RPL17P18621 184 aaKnown RBP12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 NR2F2P24468 414 aa12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 RPL9P32969 192 aaKnown RBP12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 DLG4P78352 724 aa12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 HYAL1Q12794 435 aa12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 ZCWPW2Q504Y3 356 aa12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 TIGD5Q53EQ6 642 aa12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 C9orf57Q5W0N0 161 aa12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 CENPPQ6IPU0 288 aa12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 PRSS55Q6UWB4 352 aaPredicted RBP12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 CSGALNACT2Q8N6G5 542 aa12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 MRPL43Q8N983 215 aaKnown RBP12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 BEST2Q8NFU1 509 aa12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 NELFBQ8WX92 580 aa12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 ELMO3Q96BJ8 720 aa12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 DDX27Q96GQ7 796 aaKnown RBP12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 MFSD14AQ96MC6 490 aa12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 ZBP1Q9H171 429 aa12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 NSUN3Q9H649 340 aaKnown RBP12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 TLE6Q9H808 572 aa12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 KIAA1586Q9HCI6 787 aa12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 CGNQ9P2M7 1197 aaKnown RBP12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 CTNND2Q9UQB3 1225 aa12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 TIMM13Q9Y5L4 95 aaPredicted RBP12.03□□□□□ -0.48
TUBBP1-201ENST00000248151 DOCK6Q96HP0 2047 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 SPTLC1O15269 473 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 AKAP3O75969 853 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 CST3P01034 146 aaPredicted RBP12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 SOD2P04179 222 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 ITGB3P05106 788 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 KRT19P08727 400 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 CTSAP10619 480 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 TNNI1P19237 187 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 TKTP29401 623 aaKnown RBP12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 LRPAP1P30533 357 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 RTP2Q5QGT7 225 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 KIAA0319Q5VV43 1072 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 KIAA1841Q6NSI8 718 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 LLGL2Q6P1M3 1020 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 SLC9A9Q8IVB4 645 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 RNF168Q8IYW5 571 aaPredicted RBP12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 GOLGA5Q8TBA6 731 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 RIN2Q8WYP3 895 aaPredicted RBP12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 UROC1Q96N76 676 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 FNBP1Q96RU3 617 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 DUSP9Q99956 384 aaKnown RBP12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 HERC2P3Q9BVR0 1158 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 MTMR12Q9C0I1 747 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 GZF1Q9H116 711 aaPredicted RBP12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 INTS13Q9NVM9 706 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 AGAP1Q9UPQ3 857 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 DERAQ9Y315 318 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 NUB1Q9Y5A7 615 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 COL6A3P12111 3177 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 BRWD1Q9NSI6 2320 aa12.02□□□□□ -0.49
TUBBP1-201ENST00000248151 PRUNE2Q8WUY3 3088 aa12.01□□□□□ -0.49
TUBBP1-201ENST00000248151 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.01□□□□□ -0.49
TUBBP1-201ENST00000248151 ANO9A1A5B4 782 aa12.01□□□□□ -0.49
TUBBP1-201ENST00000248151 PIRO00625 290 aa12.01□□□□□ -0.49
TUBBP1-201ENST00000248151 XPOTO43592 962 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms