RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 TROAPQ12815 778 aa20.92■□□□□ 0.94
SOX4-201ENST00000244745 GIPC2Q8TF65 315 aa20.92■□□□□ 0.94
SOX4-201ENST00000244745 PRPF31Q8WWY3 499 aaKnown RBP20.92■□□□□ 0.94
SOX4-201ENST00000244745 HUS1O60921 280 aa20.92■□□□□ 0.94
SOX4-201ENST00000244745 NDUFB10O96000 172 aa20.92■□□□□ 0.94
SOX4-201ENST00000244745 ROPN1BQ9BZX4 212 aaPredicted RBP20.92■□□□□ 0.94
SOX4-201ENST00000244745 ROPN1Q9HAT0 212 aaPredicted RBP20.92■□□□□ 0.94
SOX4-201ENST00000244745 SUN2Q9UH99 717 aa20.92■□□□□ 0.94
SOX4-201ENST00000244745 MROH2AA6NES4 1674 aa20.92■□□□□ 0.94
SOX4-201ENST00000244745 MAGEA4P43358 317 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 SCTRP47872 440 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 TEX2Q8IWB9 1127 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 SCG3Q8WXD2 468 aaKnown RBP20.91■□□□□ 0.94
SOX4-201ENST00000244745 NCLNQ969V3 563 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 PPME1Q9Y570 386 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 MYL3P08590 195 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 SERPINB4P48594 390 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 CTCFP49711 727 aaPredicted RBP20.91■□□□□ 0.94
SOX4-201ENST00000244745 AP3M2P53677 418 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 CYTH1Q15438 398 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 ING2Q9H160 280 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 RPAP3Q9H6T3 665 aaPredicted RBP20.91■□□□□ 0.94
SOX4-201ENST00000244745 BRD2P25440 801 aaKnown RBP20.91■□□□□ 0.94
SOX4-201ENST00000244745 IREB2P48200 963 aaKnown RBP20.91■□□□□ 0.94
SOX4-201ENST00000244745 SPP2Q13103 211 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 MORF4L2Q15014 288 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 FBXO33Q7Z6M2 555 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 TMEM143Q96AN5 459 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 SEMA6BQ9H3T3 888 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 PLAGL2Q9UPG8 496 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 MED21Q13503 144 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 RNF135Q8IUD6 432 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 TTC8Q8TAM2 541 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 TIPINQ9BVW5 301 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 SCHIP1Q9P0W5 487 aaPredicted RBP20.91■□□□□ 0.94
SOX4-201ENST00000244745 DAB2IPQ5VWQ8 1189 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 ZBTB10Q96DT7 871 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 KIFC3Q9BVG8 833 aa20.91■□□□□ 0.94
SOX4-201ENST00000244745 MARCOQ9UEW3 520 aaPredicted RBP20.91■□□□□ 0.94
SOX4-201ENST00000244745 DALRD3Q5D0E6 543 aaKnown RBP20.9■□□□□ 0.94
SOX4-201ENST00000244745 TEDDM1Q5T9Z0 273 aa20.9■□□□□ 0.94
SOX4-201ENST00000244745 PLA2G4FQ68DD2 849 aa20.9■□□□□ 0.94
SOX4-201ENST00000244745 LRRC34Q8IZ02 419 aa20.9■□□□□ 0.94
SOX4-201ENST00000244745 RBBP8NLQ8NC74 664 aaPredicted RBP20.9■□□□□ 0.94
SOX4-201ENST00000244745 JPH1Q9HDC5 661 aaPredicted RBP20.9■□□□□ 0.94
SOX4-201ENST00000244745 A0A087X0T9 212 aa20.9■□□□□ 0.94
SOX4-201ENST00000244745 FAM228BP0C875 321 aa20.9■□□□□ 0.94
SOX4-201ENST00000244745 PON1P27169 355 aa20.9■□□□□ 0.94
SOX4-201ENST00000244745 CDKAL1Q5VV42 579 aa20.9■□□□□ 0.94
SOX4-201ENST00000244745 CDC42EP5Q6NZY7 148 aa20.9■□□□□ 0.94
SOX4-201ENST00000244745 PACS2Q86VP3 889 aa20.9■□□□□ 0.94
SOX4-201ENST00000244745 RMDN2Q96LZ7 410 aa20.9■□□□□ 0.94
SOX4-201ENST00000244745 ACAP3Q96P50 834 aa20.9■□□□□ 0.94
SOX4-201ENST00000244745 MRPL40Q9NQ50 206 aaKnown RBP20.9■□□□□ 0.94
SOX4-201ENST00000244745 EPC2Q52LR7 807 aa20.9■□□□□ 0.94
SOX4-201ENST00000244745 CLMNQ96JQ2 1002 aa20.9■□□□□ 0.94
SOX4-201ENST00000244745 POLR3CQ9BUI4 534 aaPredicted RBP20.9■□□□□ 0.94
SOX4-201ENST00000244745 C1orf167Q5SNV9 1468 aa20.9■□□□□ 0.94
SOX4-201ENST00000244745 FRA10AC1Q70Z53 315 aa20.9■□□□□ 0.94
SOX4-201ENST00000244745 TMBIM4Q9HC24 238 aa20.9■□□□□ 0.94
SOX4-201ENST00000244745 TTI2Q6NXR4 508 aa20.89■□□□□ 0.94
SOX4-201ENST00000244745 LVRNQ6Q4G3 990 aa20.89■□□□□ 0.94
SOX4-201ENST00000244745 EPS8L3Q8TE67 593 aaKnown RBP20.89■□□□□ 0.94
SOX4-201ENST00000244745 ALKBH8Q96BT7 664 aaKnown RBP20.89■□□□□ 0.94
SOX4-201ENST00000244745 SUGT1Q9Y2Z0 365 aa20.89■□□□□ 0.94
SOX4-201ENST00000244745 ADGRB1O14514 1584 aa20.89■□□□□ 0.94
SOX4-201ENST00000244745 KLRK1P26718 216 aa20.89■□□□□ 0.94
SOX4-201ENST00000244745 C18orf8Q96DM3 657 aa20.89■□□□□ 0.94
SOX4-201ENST00000244745 KLF6Q99612 283 aaPredicted RBP20.89■□□□□ 0.94
SOX4-201ENST00000244745 RANBP17Q9H2T7 1088 aaKnown RBP20.89■□□□□ 0.94
SOX4-201ENST00000244745 TOPORSQ9NS56 1045 aaPredicted RBP20.89■□□□□ 0.94
SOX4-201ENST00000244745 EFHC2Q5JST6 749 aa20.89■□□□□ 0.93
SOX4-201ENST00000244745 IFT43Q96FT9 208 aa20.89■□□□□ 0.93
SOX4-201ENST00000244745 PI4K2AQ9BTU6 479 aa20.89■□□□□ 0.93
SOX4-201ENST00000244745 KCND2Q9NZV8 630 aa20.89■□□□□ 0.93
SOX4-201ENST00000244745 CHMP2BQ9UQN3 213 aa20.89■□□□□ 0.93
SOX4-201ENST00000244745 MAN1A2O60476 641 aa20.89■□□□□ 0.93
SOX4-201ENST00000244745 SNX2O60749 519 aa20.89■□□□□ 0.93
SOX4-201ENST00000244745 NQO1P15559 274 aaKnown RBP20.89■□□□□ 0.93
SOX4-201ENST00000244745 CNGA3Q16281 694 aa20.89■□□□□ 0.93
SOX4-201ENST00000244745 ACAD9Q9H845 621 aa20.89■□□□□ 0.93
SOX4-201ENST00000244745 HACD3Q9P035 362 aa20.89■□□□□ 0.93
SOX4-201ENST00000244745 HERC5Q9UII4 1024 aaKnown RBP20.89■□□□□ 0.93
SOX4-201ENST00000244745 ATP9BO43861 1147 aa20.89■□□□□ 0.93
SOX4-201ENST00000244745 SESN2P58004 480 aaPredicted RBP20.89■□□□□ 0.93
SOX4-201ENST00000244745 PTK7Q13308 1070 aa20.89■□□□□ 0.93
SOX4-201ENST00000244745 GFM2Q969S9 779 aaKnown RBP20.89■□□□□ 0.93
SOX4-201ENST00000244745 SPATA33Q96N06 139 aa20.89■□□□□ 0.93
SOX4-201ENST00000244745 FBXO40Q9UH90 709 aa20.89■□□□□ 0.93
SOX4-201ENST00000244745 A8MXQ7 604 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 RPA1P27694 616 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 ILDR1Q86SU0 546 aaPredicted RBP20.88■□□□□ 0.93
SOX4-201ENST00000244745 ZBTB18Q99592 522 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 OSBPL8Q9BZF1 889 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 H3BRJ5 948 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 KDM1AO60341 852 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 ANP32DO95626 131 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 ZFXP17010 805 aaPredicted RBP20.88■□□□□ 0.93
SOX4-201ENST00000244745 MTM1Q13496 603 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 FASTKD1Q53R41 847 aaKnown RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms