RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 CDCA2Q69YH5 1023 aaPredicted RBP18.88■□□□□ 0.61
HOXC6-201ENST00000243108 PDE12Q6L8Q7 609 aaKnown RBP18.88■□□□□ 0.61
HOXC6-201ENST00000243108 NOTUMQ6P988 496 aa18.88■□□□□ 0.61
HOXC6-201ENST00000243108 GJD3Q8N144 294 aa18.88■□□□□ 0.61
HOXC6-201ENST00000243108 ERGIC2Q96RQ1 377 aa18.88■□□□□ 0.61
HOXC6-201ENST00000243108 MIOSQ9NXC5 875 aa18.88■□□□□ 0.61
HOXC6-201ENST00000243108 USP20Q9Y2K6 914 aa18.88■□□□□ 0.61
HOXC6-201ENST00000243108 TBCAO75347 108 aaKnown RBP18.87■□□□□ 0.61
HOXC6-201ENST00000243108 POMCP01189 267 aa18.87■□□□□ 0.61
HOXC6-201ENST00000243108 EDN1P05305 212 aa18.87■□□□□ 0.61
HOXC6-201ENST00000243108 AXLP30530 894 aa18.87■□□□□ 0.61
HOXC6-201ENST00000243108 SMAD4Q13485 552 aaKnown RBP18.87■□□□□ 0.61
HOXC6-201ENST00000243108 MAN2A1Q16706 1144 aa18.87■□□□□ 0.61
HOXC6-201ENST00000243108 EDRF1Q3B7T1 1238 aa18.87■□□□□ 0.61
HOXC6-201ENST00000243108 SMRP1Q8NCR6 262 aa18.87■□□□□ 0.61
HOXC6-201ENST00000243108 IGSF21Q96ID5 467 aa18.87■□□□□ 0.61
HOXC6-201ENST00000243108 NXF3Q9H4D5 531 aaKnown RBP18.87■□□□□ 0.61
HOXC6-201ENST00000243108 ZHX3Q9H4I2 956 aa18.87■□□□□ 0.61
HOXC6-201ENST00000243108 ARHGEF35A5YM69 484 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 C2orf71A6NGG8 1288 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 KIF2AO00139 706 aaPredicted RBP18.86■□□□□ 0.61
HOXC6-201ENST00000243108 CASP5P51878 434 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 ZNF131P52739 623 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 RNASELQ05823 741 aaKnown RBP18.86■□□□□ 0.61
HOXC6-201ENST00000243108 PTPN14Q15678 1187 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 TMC7Q7Z402 723 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 MRPL43Q8N983 215 aaKnown RBP18.86■□□□□ 0.61
HOXC6-201ENST00000243108 CPLX3Q8WVH0 158 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 AUTS2Q8WXX7 1259 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 RSPH1Q8WYR4 309 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 ZFP42Q96MM3 310 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 FZD8Q9H461 694 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 NGRNQ9NPE2 291 aaKnown RBP18.86■□□□□ 0.61
HOXC6-201ENST00000243108 ODF2LQ9ULJ1 636 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 CNTNAP2Q9UHC6 1331 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 A0A1B0GUA9 196 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 ARL5CA6NH57 179 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 C19orf67A6NJJ6 358 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 RNF225M0QZC1 329 aaPredicted RBP18.86■□□□□ 0.61
HOXC6-201ENST00000243108 ITGA4P13612 1032 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 GUCY2CP25092 1073 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 MARSP56192 900 aaKnown RBP18.86■□□□□ 0.61
HOXC6-201ENST00000243108 VWA3BQ502W6 1294 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 NELFCDQ8IXH7 590 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 GSTCDQ8NEC7 633 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 TMEM169Q96HH4 297 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 GAD1Q99259 594 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 KIFC3Q9BVG8 833 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 TTYH3Q9C0H2 523 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 ZBP1Q9H171 429 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 ABHD10Q9NUJ1 306 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 SEL1LQ9UBV2 794 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 TRAF3IP3Q9Y228 551 aa18.86■□□□□ 0.61
HOXC6-201ENST00000243108 PES1O00541 588 aaKnown RBP18.85■□□□□ 0.61
HOXC6-201ENST00000243108 INPPL1O15357 1258 aa18.85■□□□□ 0.61
HOXC6-201ENST00000243108 GNA14O95837 355 aa18.85■□□□□ 0.61
HOXC6-201ENST00000243108 HOXD13P35453 343 aa18.85■□□□□ 0.61
HOXC6-201ENST00000243108 MLH1P40692 756 aa18.85■□□□□ 0.61
HOXC6-201ENST00000243108 KNOP1Q1ED39 458 aaKnown RBP18.85■□□□□ 0.61
HOXC6-201ENST00000243108 FIGNQ5HY92 759 aa18.85■□□□□ 0.61
HOXC6-201ENST00000243108 ADHFE1Q8IWW8 467 aa18.85■□□□□ 0.61
HOXC6-201ENST00000243108 REXO1L1PQ8IX06 675 aa18.85■□□□□ 0.61
HOXC6-201ENST00000243108 VPS52Q8N1B4 723 aa18.85■□□□□ 0.61
HOXC6-201ENST00000243108 CDCA3Q99618 268 aaPredicted RBP18.85■□□□□ 0.61
HOXC6-201ENST00000243108 NUP58Q9BVL2 599 aa18.85■□□□□ 0.61
HOXC6-201ENST00000243108 APOL6Q9BWW8 343 aa18.85■□□□□ 0.61
HOXC6-201ENST00000243108 CCDC113Q9H0I3 377 aa18.85■□□□□ 0.61
HOXC6-201ENST00000243108 CAPN11Q9UMQ6 739 aa18.85■□□□□ 0.61
HOXC6-201ENST00000243108 EIF3DO15371 548 aaKnown RBP eCLIP18.84■□□□□ 0.61
HOXC6-201ENST00000243108 ZSCAN12O43309 604 aa18.84■□□□□ 0.61
HOXC6-201ENST00000243108 FAM13AO94988 1023 aa18.84■□□□□ 0.61
HOXC6-201ENST00000243108 NPTXRO95502 500 aa18.84■□□□□ 0.61
HOXC6-201ENST00000243108 AKAP5P24588 427 aa18.84■□□□□ 0.61
HOXC6-201ENST00000243108 SSTR3P32745 418 aaPredicted RBP18.84■□□□□ 0.61
HOXC6-201ENST00000243108 SYCP1Q15431 976 aa18.84■□□□□ 0.61
HOXC6-201ENST00000243108 FAM187BQ17R55 369 aa18.84■□□□□ 0.61
HOXC6-201ENST00000243108 FKBP15Q5T1M5 1219 aa18.84■□□□□ 0.61
HOXC6-201ENST00000243108 LLGL2Q6P1M3 1020 aa18.84■□□□□ 0.61
HOXC6-201ENST00000243108 TMEM184AQ6ZMB5 413 aa18.84■□□□□ 0.61
HOXC6-201ENST00000243108 DDX53Q86TM3 631 aaKnown RBP18.84■□□□□ 0.61
HOXC6-201ENST00000243108 URGCPQ8TCY9 931 aa18.84■□□□□ 0.61
HOXC6-201ENST00000243108 IQCDQ96DY2 449 aa18.84■□□□□ 0.61
HOXC6-201ENST00000243108 NDST4Q9H3R1 872 aa18.84■□□□□ 0.61
HOXC6-201ENST00000243108 PARVGQ9HBI0 331 aa18.84■□□□□ 0.61
HOXC6-201ENST00000243108 C11orf16Q9NQ32 467 aa18.84■□□□□ 0.61
HOXC6-201ENST00000243108 PRKAG3Q9UGI9 489 aa18.84■□□□□ 0.61
HOXC6-201ENST00000243108 PPP2R2CQ9Y2T4 447 aa18.84■□□□□ 0.61
HOXC6-201ENST00000243108 TTC26A0AVF1 554 aa18.83■□□□□ 0.61
HOXC6-201ENST00000243108 F8W810 466 aa18.83■□□□□ 0.61
HOXC6-201ENST00000243108 PDXKO00764 312 aa18.83■□□□□ 0.61
HOXC6-201ENST00000243108 TUBB4AP04350 444 aa18.83■□□□□ 0.61
HOXC6-201ENST00000243108 MYBP10242 640 aa18.83■□□□□ 0.61
HOXC6-201ENST00000243108 KRT9P35527 623 aa18.83■□□□□ 0.61
HOXC6-201ENST00000243108 SCNN1GP51170 649 aa18.83■□□□□ 0.61
HOXC6-201ENST00000243108 SMC1AQ14683 1233 aaKnown RBP18.83■□□□□ 0.61
HOXC6-201ENST00000243108 SLC27A1Q6PCB7 646 aa18.83■□□□□ 0.61
HOXC6-201ENST00000243108 SYCE2Q6PIF2 218 aa18.83■□□□□ 0.61
HOXC6-201ENST00000243108 COLGALT2Q8IYK4 626 aa18.83■□□□□ 0.61
HOXC6-201ENST00000243108 DAW1Q8N136 415 aa18.83■□□□□ 0.61
HOXC6-201ENST00000243108 DNAJC7Q99615 494 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms