RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 TAF4BQ92750 862 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 NOX5Q96PH1 765 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 EIF3CQ99613 913 aaKnown RBP9.33□□□□□ -0.92
VPS4B-201ENST00000238497 ADAM2Q99965 735 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 HSD17B14Q9BPX1 270 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 CBWD1Q9BRT8 395 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 TCHPQ9BT92 498 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 TSPYL2Q9H2G4 693 aaPredicted RBP9.33□□□□□ -0.92
VPS4B-201ENST00000238497 PDE11AQ9HCR9 933 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 LUC7LQ9NQ29 371 aaKnown RBP9.33□□□□□ -0.92
VPS4B-201ENST00000238497 MYO1AQ9UBC5 1043 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 ST3GAL5Q9UNP4 418 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 IGKV6D-21A0A0A0MT36 114 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 EPOPA6NHQ4 379 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 ENPP3O14638 875 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 KCNK3O14649 394 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 GNA14O95837 355 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 CALCAP01258 141 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 PSMC2P35998 433 aaKnown RBP9.33□□□□□ -0.92
VPS4B-201ENST00000238497 QARSP47897 775 aaKnown RBP9.33□□□□□ -0.92
VPS4B-201ENST00000238497 POLGP54098 1239 aaPredicted RBP9.33□□□□□ -0.92
VPS4B-201ENST00000238497 PSMC5P62195 406 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 MKRN4PQ13434 485 aaPredicted RBP9.33□□□□□ -0.92
VPS4B-201ENST00000238497 STXBP4Q6ZWJ1 553 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 GLYCTKQ8IVS8 523 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 TRIM59Q8IWR1 403 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 CCDC170Q8IYT3 715 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 EHBP1Q8NDI1 1231 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 TRIM31Q9BZY9 425 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 KCND1Q9NSA2 647 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 TYW1Q9NV66 732 aaKnown RBP9.33□□□□□ -0.92
VPS4B-201ENST00000238497 VPS18Q9P253 973 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 PDE2AO00408 941 aaPredicted RBP9.33□□□□□ -0.92
VPS4B-201ENST00000238497 TBX3O15119 743 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 CEP104O60308 925 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 C22orf31O95567 290 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 RPLP2P05387 115 aaKnown RBP9.33□□□□□ -0.92
VPS4B-201ENST00000238497 OAS2P29728 719 aaKnown RBP9.33□□□□□ -0.92
VPS4B-201ENST00000238497 YWHABP31946 246 aaKnown RBP9.33□□□□□ -0.92
VPS4B-201ENST00000238497 HOXD13P35453 343 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 SMC1AQ14683 1233 aaKnown RBP9.33□□□□□ -0.92
VPS4B-201ENST00000238497 EPHA7Q15375 998 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 SEZ6Q53EL9 994 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 ZFYVE27Q5T4F4 411 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 NME8Q8N427 588 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 SLC7A3Q8WY07 619 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 TOP1MTQ969P6 601 aa9.33□□□□□ -0.92
VPS4B-201ENST00000238497 UBE2TQ9NPD8 197 aaPredicted RBP9.33□□□□□ -0.92
VPS4B-201ENST00000238497 EVPLQ92817 2033 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 SASH3O75995 380 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 SRGAP2CP0DJJ0 459 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 DLG4P78352 724 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 HLTFQ14527 1009 aaKnown RBP eCLIP9.32□□□□□ -0.92
VPS4B-201ENST00000238497 ALKBH5Q6P6C2 394 aaKnown RBP9.32□□□□□ -0.92
VPS4B-201ENST00000238497 TRIM58Q8NG06 486 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 CEP63Q96MT8 703 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 TTYH3Q9C0H2 523 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 CEP72Q9P209 647 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 SUCLA2Q9P2R7 463 aaPredicted RBP9.32□□□□□ -0.92
VPS4B-201ENST00000238497 DNAJC12Q9UKB3 198 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 PCDHB7Q9Y5E2 793 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 GPR182O15218 404 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 DKC1O60832 514 aaKnown RBP eCLIP9.32□□□□□ -0.92
VPS4B-201ENST00000238497 N4BP1O75113 896 aaKnown RBP9.32□□□□□ -0.92
VPS4B-201ENST00000238497 NOL4O94818 638 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 SERPING1P05155 500 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 P4HBP07237 508 aaKnown RBP9.32□□□□□ -0.92
VPS4B-201ENST00000238497 PON1P27169 355 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 CA8P35219 290 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 STAT1P42224 750 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 GATMP50440 423 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 DRP2Q13474 957 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 FAM26DQ5JW98 314 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 MOXD1Q6UVY6 613 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 C1orf186Q6ZWK4 172 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 VPS36Q86VN1 386 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 ABI1Q8IZP0 508 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 HDAC7Q8WUI4 952 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 TMEM40Q8WWA1 233 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 RIN2Q8WYP3 895 aaPredicted RBP9.32□□□□□ -0.92
VPS4B-201ENST00000238497 BAP1Q92560 729 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 TMEM143Q96AN5 459 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 MYH10P35580 1976 aa9.32□□□□□ -0.92
VPS4B-201ENST00000238497 MYH9P35579 1960 aaKnown RBP9.32□□□□□ -0.92
VPS4B-201ENST00000238497 TGFB1I1O43294 461 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 STAG3L1P0CL83 205 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 H2AFXP16104 143 aaPredicted RBP9.31□□□□□ -0.92
VPS4B-201ENST00000238497 TNFAIP3P21580 790 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 MGAT3Q09327 533 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 GPM6BQ13491 265 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 DRAP1Q14919 205 aaPredicted RBP9.31□□□□□ -0.92
VPS4B-201ENST00000238497 WHAMMP3Q1A5X7 153 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 EPC2Q52LR7 807 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 ZNF720Q7Z2F6 126 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 HAUS6Q7Z4H7 955 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 MICAL1Q8TDZ2 1067 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 POMGNT1Q8WZA1 660 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 POLR3CQ9BUI4 534 aaPredicted RBP9.31□□□□□ -0.92
VPS4B-201ENST00000238497 AP1M1Q9BXS5 423 aa9.31□□□□□ -0.92
VPS4B-201ENST00000238497 FTHL17Q9BXU8 183 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms