RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 SMIM10L2BP0DMW5 78 aa8.48□□□□□ -1.05
NANOG-201ENST00000229307 PREPLQ4J6C6 727 aaPredicted RBP8.48□□□□□ -1.05
NANOG-201ENST00000229307 ZC2HC1CQ53FD0 456 aaPredicted RBP8.48□□□□□ -1.05
NANOG-201ENST00000229307 RAB44Q7Z6P3 723 aaPredicted RBP8.48□□□□□ -1.05
NANOG-201ENST00000229307 RBBP8NLQ8NC74 664 aaPredicted RBP8.48□□□□□ -1.05
NANOG-201ENST00000229307 MRRFQ96E11 262 aaKnown RBP8.48□□□□□ -1.05
NANOG-201ENST00000229307 KLK14Q9P0G3 267 aa8.48□□□□□ -1.05
NANOG-201ENST00000229307 STK39Q9UEW8 545 aa8.48□□□□□ -1.05
NANOG-201ENST00000229307 ADAMTS1Q9UHI8 967 aa8.48□□□□□ -1.05
NANOG-201ENST00000229307 SNCAIPQ9Y6H5 919 aa8.48□□□□□ -1.05
NANOG-201ENST00000229307 PDGFRBP09619 1106 aa8.48□□□□□ -1.05
NANOG-201ENST00000229307 PKN1Q16512 942 aa8.48□□□□□ -1.05
NANOG-201ENST00000229307 GJC2Q5T442 439 aaPredicted RBP8.48□□□□□ -1.05
NANOG-201ENST00000229307 ZPBP2Q6X784 338 aa8.48□□□□□ -1.05
NANOG-201ENST00000229307 WDR49Q8IV35 697 aa8.48□□□□□ -1.05
NANOG-201ENST00000229307 PPTC7Q8NI37 304 aa8.48□□□□□ -1.05
NANOG-201ENST00000229307 APBB2Q92870 758 aa8.48□□□□□ -1.05
NANOG-201ENST00000229307 CGRRF1Q99675 332 aa8.48□□□□□ -1.05
NANOG-201ENST00000229307 KLC2Q9H0B6 622 aa8.48□□□□□ -1.05
NANOG-201ENST00000229307 IL25Q9H293 177 aa8.48□□□□□ -1.05
NANOG-201ENST00000229307 RSAD1Q9HA92 442 aa8.48□□□□□ -1.05
NANOG-201ENST00000229307 DDX20Q9UHI6 824 aaKnown RBP8.48□□□□□ -1.05
NANOG-201ENST00000229307 DUSP11O75319 330 aaKnown RBP8.47□□□□□ -1.05
NANOG-201ENST00000229307 PGK1P00558 417 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 FGRP09769 529 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 YWHAGP61981 247 aaKnown RBP eCLIP8.47□□□□□ -1.05
NANOG-201ENST00000229307 NAA35Q5VZE5 725 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 DDX53Q86TM3 631 aaKnown RBP8.47□□□□□ -1.05
NANOG-201ENST00000229307 PPP1R2P1Q96PQ5 205 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 SPON2Q9BUD6 331 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 KLHL8Q9P2G9 620 aaPredicted RBP8.47□□□□□ -1.05
NANOG-201ENST00000229307 LRRC53A6NM62 1247 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 SPATA31C2B4DYI2 1134 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 CYB561D2O14569 222 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 ADCY6O43306 1168 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 CREB3O43889 395 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 ZRANB2O95218 330 aaKnown RBP eCLIP8.47□□□□□ -1.05
NANOG-201ENST00000229307 PPM1AP35813 382 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 MAP7Q14244 749 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 NTRK3Q16288 839 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 SARM1Q6SZW1 724 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 OTOP1Q7RTM1 612 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 PHLDB2Q86SQ0 1253 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 GLYCTKQ8IVS8 523 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 CDKL3Q8IVW4 592 aaPredicted RBP8.47□□□□□ -1.05
NANOG-201ENST00000229307 VPS52Q8N1B4 723 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 TMC2Q8TDI7 906 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 CHAMP1Q96JM3 812 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 AGPAT1Q99943 283 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 AGPAT3Q9NRZ7 376 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 THG1LQ9NWX6 298 aaKnown RBP8.47□□□□□ -1.05
NANOG-201ENST00000229307 TRPM5Q9NZQ8 1165 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 UMODL1Q5DID0 1318 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 ACKR2O00590 384 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 SLC1A1P43005 524 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 ASPHQ12797 758 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 ZNF235Q14590 738 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.47□□□□□ -1.05
NANOG-201ENST00000229307 CTU1Q7Z7A3 348 aaKnown RBP8.47□□□□□ -1.05
NANOG-201ENST00000229307 METTL16Q86W50 562 aaKnown RBP8.47□□□□□ -1.05
NANOG-201ENST00000229307 PGBD3Q8N328 593 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 FIBCD1Q8N539 461 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 ZNF564Q8TBZ8 553 aaPredicted RBP8.47□□□□□ -1.05
NANOG-201ENST00000229307 ZNF558Q96NG5 402 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 TSPAN18Q96SJ8 248 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 FSD1LQ9BXM9 530 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 CYP3A43Q9HB55 503 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 ABI2Q9NYB9 513 aaPredicted RBP8.47□□□□□ -1.05
NANOG-201ENST00000229307 AFDNP55196 1824 aaKnown RBP8.47□□□□□ -1.05
NANOG-201ENST00000229307 A6NNZ2 444 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 RTN2O75298 545 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 KLRC2P26717 231 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 KPNA1P52294 538 aaPredicted RBP8.47□□□□□ -1.05
NANOG-201ENST00000229307 SETDB1Q15047 1291 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 TUBB8Q3ZCM7 444 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 PPP4R1Q8TF05 950 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 CARD6Q9BX69 1037 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 ASB7Q9H672 318 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 RWDD3Q9Y3V2 267 aa8.47□□□□□ -1.05
NANOG-201ENST00000229307 PPP1R12AO14974 1030 aaPredicted RBP8.46□□□□□ -1.05
NANOG-201ENST00000229307 SEPT4O43236 478 aa8.46□□□□□ -1.05
NANOG-201ENST00000229307 PMLP29590 882 aa8.46□□□□□ -1.05
NANOG-201ENST00000229307 VPS41P49754 854 aa8.46□□□□□ -1.05
NANOG-201ENST00000229307 IRX5P78411 483 aaPredicted RBP8.46□□□□□ -1.05
NANOG-201ENST00000229307 SEPT6Q14141 434 aa8.46□□□□□ -1.05
NANOG-201ENST00000229307 PRAMEF19Q5SWL8 479 aa8.46□□□□□ -1.05
NANOG-201ENST00000229307 ADGRF2Q8IZF7 708 aa8.46□□□□□ -1.05
NANOG-201ENST00000229307 ATP6V0D2Q8N8Y2 350 aa8.46□□□□□ -1.05
NANOG-201ENST00000229307 CPB2Q96IY4 423 aa8.46□□□□□ -1.05
NANOG-201ENST00000229307 NUP85Q9BW27 656 aa8.46□□□□□ -1.05
NANOG-201ENST00000229307 PCDHB2Q9Y5E7 798 aa8.46□□□□□ -1.05
NANOG-201ENST00000229307 POLR3GO15318 223 aaPredicted RBP8.46□□□□□ -1.06
NANOG-201ENST00000229307 KRT3P12035 628 aa8.46□□□□□ -1.06
NANOG-201ENST00000229307 SLC11A2P49281 568 aa8.46□□□□□ -1.06
NANOG-201ENST00000229307 CBX1P83916 185 aa8.46□□□□□ -1.06
NANOG-201ENST00000229307 QSER1Q2KHR3 1735 aa8.46□□□□□ -1.06
NANOG-201ENST00000229307 ANO4Q32M45 955 aa8.46□□□□□ -1.06
NANOG-201ENST00000229307 RNF187Q5TA31 235 aaPredicted RBP8.46□□□□□ -1.06
NANOG-201ENST00000229307 ASIC4Q96FT7 647 aa8.46□□□□□ -1.06
NANOG-201ENST00000229307 UXTQ9UBK9 157 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms