RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 POLR2BP30876 1174 aaKnown RBP15.91■□□□□ 0.14
UBE2D4-201ENST00000222402 NCOA4Q13772 614 aa15.91■□□□□ 0.14
UBE2D4-201ENST00000222402 ANO5Q75V66 913 aa15.91■□□□□ 0.14
UBE2D4-201ENST00000222402 RDM1Q8NG50 284 aa15.91■□□□□ 0.14
UBE2D4-201ENST00000222402 ZWILCHQ9H900 591 aa15.91■□□□□ 0.14
UBE2D4-201ENST00000222402 GGT7Q9UJ14 662 aa15.91■□□□□ 0.14
UBE2D4-201ENST00000222402 STK38LQ9Y2H1 464 aa15.91■□□□□ 0.14
UBE2D4-201ENST00000222402 STXBP5LQ9Y2K9 1186 aa15.91■□□□□ 0.14
UBE2D4-201ENST00000222402 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.91■□□□□ 0.14
UBE2D4-201ENST00000222402 SLC1A1P43005 524 aa15.91■□□□□ 0.14
UBE2D4-201ENST00000222402 IFI35P80217 286 aaPredicted RBP15.91■□□□□ 0.14
UBE2D4-201ENST00000222402 TMEM35BQ8NCS4 154 aa15.91■□□□□ 0.14
UBE2D4-201ENST00000222402 TMEM51Q9NW97 253 aa15.91■□□□□ 0.14
UBE2D4-201ENST00000222402 PLA2G6O60733 806 aa15.9■□□□□ 0.14
UBE2D4-201ENST00000222402 TBXAS1P24557 533 aaPredicted RBP15.9■□□□□ 0.14
UBE2D4-201ENST00000222402 HADHQ16836 314 aaKnown RBP15.9■□□□□ 0.14
UBE2D4-201ENST00000222402 CLEC16AQ2KHT3 1053 aa15.9■□□□□ 0.14
UBE2D4-201ENST00000222402 THOC1Q96FV9 657 aaKnown RBP15.9■□□□□ 0.14
UBE2D4-201ENST00000222402 IQCGQ9H095 443 aaKnown RBP15.9■□□□□ 0.14
UBE2D4-201ENST00000222402 MAP3K20Q9NYL2 800 aaKnown RBP15.9■□□□□ 0.14
UBE2D4-201ENST00000222402 FBXO40Q9UH90 709 aa15.9■□□□□ 0.14
UBE2D4-201ENST00000222402 PCDHA3Q9Y5H8 950 aa15.9■□□□□ 0.14
UBE2D4-201ENST00000222402 DCDC2CA8MYV0 355 aa15.9■□□□□ 0.14
UBE2D4-201ENST00000222402 RARGP13631 454 aa15.9■□□□□ 0.14
UBE2D4-201ENST00000222402 ITIH2P19823 946 aa15.9■□□□□ 0.14
UBE2D4-201ENST00000222402 ANGEL2Q5VTE6 544 aaKnown RBP15.9■□□□□ 0.14
UBE2D4-201ENST00000222402 CLEC4DQ8WXI8 215 aa15.9■□□□□ 0.14
UBE2D4-201ENST00000222402 ADAM33Q9BZ11 813 aa15.9■□□□□ 0.14
UBE2D4-201ENST00000222402 GRIN2DO15399 1336 aa15.9■□□□□ 0.14
UBE2D4-201ENST00000222402 GOLGA8MH3BSY2 632 aa15.9■□□□□ 0.14
UBE2D4-201ENST00000222402 ATP2A2P16615 1042 aaKnown RBP15.9■□□□□ 0.14
UBE2D4-201ENST00000222402 GARTP22102 1010 aa15.9■□□□□ 0.14
UBE2D4-201ENST00000222402 XRRA1Q6P2D8 792 aa15.9■□□□□ 0.14
UBE2D4-201ENST00000222402 TRIM72Q6ZMU5 477 aa15.9■□□□□ 0.14
UBE2D4-201ENST00000222402 TRMT10CQ7L0Y3 403 aaKnown RBP15.9■□□□□ 0.14
UBE2D4-201ENST00000222402 TCRBV7S2A1N4TA0A589 114 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 RASA4BC9J798 803 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 RASA4O43374 803 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 E2F5Q15329 346 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 MAPK6Q16659 721 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 ARHGEF18Q6ZSZ5 1173 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 FAM47EQ6ZV65 393 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 CPNE8Q86YQ8 564 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 ZBTB45Q96K62 511 aaPredicted RBP15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 CDC42EP4Q9H3Q1 356 aaKnown RBP15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 MYH4Q9Y623 1939 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 PPFIA2O75334 1257 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 TJP3O95049 919 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 YWHAEP62258 255 aaKnown RBP15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 DCAF12L1Q5VU92 463 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 DAB2IPQ5VWQ8 1189 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 CCDC60Q8IWA6 550 aaPredicted RBP15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 PIK3R5Q8WYR1 880 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 RBM41Q96IZ5 413 aaKnown RBP15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 JPH2Q9BR39 696 aaPredicted RBP15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 TRAIPQ9BWF2 469 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 STAT5BP51692 787 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 GPS1Q13098 491 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 SNCBQ16143 134 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 TBC1D1Q86TI0 1168 aaPredicted RBP15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 VSIG10LQ86VR7 867 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 PALM2Q8IXS6 379 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 SCYL3Q8IZE3 742 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 MCOLN2Q8IZK6 566 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 ANKRD36BP1Q96IX9 119 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 CFAP57Q96MR6 1250 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 FIZ1Q96SL8 496 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 CALN1Q9BXU9 219 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 PARVAQ9NVD7 372 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 DDX20Q9UHI6 824 aaKnown RBP15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 RIPK3Q9Y572 518 aa15.89■□□□□ 0.13
UBE2D4-201ENST00000222402 RNF8O76064 485 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 ALDH3A1P30838 453 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 GPC3P51654 580 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 NLRP11P59045 1033 aaKnown RBP15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 ZBTB16Q05516 673 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 CUL2Q13617 745 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 SUPT20HL1Q3ZLR7 823 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 LLGL2Q6P1M3 1020 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 DEFB132Q7Z7B7 95 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 C12orf56Q8IXR9 622 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 RNF149Q8NC42 400 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 SPIRE2Q8WWL2 714 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 ACSF2Q96CM8 615 aaPredicted RBP15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 TBC1D31Q96DN5 1066 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 CHST7Q9NS84 486 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 PSMA2P25787 234 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 GTF2H1P32780 548 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 IL9RQ01113 521 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 CAV1Q03135 178 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 ZNF699Q32M78 642 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 SCYL2Q6P3W7 929 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 LRRC34Q8IZ02 419 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 DDX23Q9BUQ8 820 aaKnown RBP15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 TRIM7Q9C029 511 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 IP6K2Q9UHH9 426 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 TMEM120BA0PK00 339 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 TCP11X1B4DZS4 312 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 TRAPPC3O43617 180 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms