RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 NUP85Q9BW27 656 aa18.88■□□□□ 0.61
GCDH-201ENST00000222214 ZCCHC17Q9NP64 241 aaKnown RBP18.88■□□□□ 0.61
GCDH-201ENST00000222214 PCDHB4Q9Y5E5 795 aa18.88■□□□□ 0.61
GCDH-201ENST00000222214 H3BRB1 525 aa18.88■□□□□ 0.61
GCDH-201ENST00000222214 KRIT1O00522 736 aa18.88■□□□□ 0.61
GCDH-201ENST00000222214 ZEB2O60315 1214 aa18.88■□□□□ 0.61
GCDH-201ENST00000222214 HEXIM1O94992 359 aaKnown RBP18.88■□□□□ 0.61
GCDH-201ENST00000222214 CYP1A1P04798 512 aaPredicted RBP18.88■□□□□ 0.61
GCDH-201ENST00000222214 HSPA6P17066 643 aa18.88■□□□□ 0.61
GCDH-201ENST00000222214 FAXDC2Q96IV6 333 aa18.88■□□□□ 0.61
GCDH-201ENST00000222214 TUT1Q9H6E5 874 aaKnown RBP18.88■□□□□ 0.61
GCDH-201ENST00000222214 NUB1Q9Y5A7 615 aa18.88■□□□□ 0.61
GCDH-201ENST00000222214 TNNC2P02585 160 aa18.87■□□□□ 0.61
GCDH-201ENST00000222214 RNASE9P60153 205 aaKnown RBP18.87■□□□□ 0.61
GCDH-201ENST00000222214 IGBP1P78318 339 aa18.87■□□□□ 0.61
GCDH-201ENST00000222214 SLC7A5Q01650 507 aa18.87■□□□□ 0.61
GCDH-201ENST00000222214 CENPCQ03188 943 aa18.87■□□□□ 0.61
GCDH-201ENST00000222214 PAK2Q13177 524 aa18.87■□□□□ 0.61
GCDH-201ENST00000222214 NNTQ13423 1086 aa18.87■□□□□ 0.61
GCDH-201ENST00000222214 TRPC3Q13507 836 aa18.87■□□□□ 0.61
GCDH-201ENST00000222214 ACVR2BQ13705 512 aa18.87■□□□□ 0.61
GCDH-201ENST00000222214 SEZ6Q53EL9 994 aa18.87■□□□□ 0.61
GCDH-201ENST00000222214 GJC2Q5T442 439 aaPredicted RBP18.87■□□□□ 0.61
GCDH-201ENST00000222214 SPOPLQ6IQ16 392 aa18.87■□□□□ 0.61
GCDH-201ENST00000222214 ANKRD36BP1Q96IX9 119 aa18.87■□□□□ 0.61
GCDH-201ENST00000222214 VCPIP1Q96JH7 1222 aa18.87■□□□□ 0.61
GCDH-201ENST00000222214 PTPN18Q99952 460 aa18.87■□□□□ 0.61
GCDH-201ENST00000222214 IFT122Q9HBG6 1241 aa18.87■□□□□ 0.61
GCDH-201ENST00000222214 MED4Q9NPJ6 270 aa18.87■□□□□ 0.61
GCDH-201ENST00000222214 CNOT8Q9UFF9 292 aaKnown RBP18.87■□□□□ 0.61
GCDH-201ENST00000222214 EVPLQ92817 2033 aa18.87■□□□□ 0.61
GCDH-201ENST00000222214 GOLGA6L10A0A0M3HER8 536 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 CCDC66A2RUB6 948 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 TMEM191BP0C7N4 346 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 MCF2P10911 925 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 GNA15P30679 374 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 NSFP46459 744 aaKnown RBP18.86■□□□□ 0.61
GCDH-201ENST00000222214 DGKDQ16760 1214 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 TMEM270Q6UE05 265 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 MAATS1Q7Z4T9 603 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 RBBP8NLQ8NC74 664 aaPredicted RBP18.86■□□□□ 0.61
GCDH-201ENST00000222214 CCDC26Q8TAB7 109 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 RNPC3Q96LT9 517 aaKnown RBP18.86■□□□□ 0.61
GCDH-201ENST00000222214 ZSWIM1Q9BR11 485 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 MTMR12Q9C0I1 747 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 RPF1Q9H9Y2 349 aaKnown RBP18.86■□□□□ 0.61
GCDH-201ENST00000222214 RRAGCQ9HB90 399 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 MMP3P08254 477 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 HOXC6P09630 235 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 MYBL2P10244 700 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 OAS2P29728 719 aaKnown RBP18.86■□□□□ 0.61
GCDH-201ENST00000222214 YWHAEP62258 255 aaKnown RBP18.86■□□□□ 0.61
GCDH-201ENST00000222214 MESDQ14696 234 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 PTPROQ16827 1216 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 HSP90B2PQ58FF3 399 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 MTHFD1LQ6UB35 978 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 MCOLN2Q8IZK6 566 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 OR6J1Q8NGC5 347 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 CAVIN3Q969G5 261 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 FAM84AQ96KN4 292 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 NIF3L1Q9GZT8 377 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 CDT1Q9H211 546 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 AKT3Q9Y243 479 aa18.86■□□□□ 0.61
GCDH-201ENST00000222214 GJB1P08034 283 aa18.85■□□□□ 0.61
GCDH-201ENST00000222214 SMPD1P17405 629 aa18.85■□□□□ 0.61
GCDH-201ENST00000222214 CTNNA2P26232 953 aa18.85■□□□□ 0.61
GCDH-201ENST00000222214 AARSP49588 968 aaKnown RBP eCLIP18.85■□□□□ 0.61
GCDH-201ENST00000222214 KLHL7Q8IXQ5 586 aa18.85■□□□□ 0.61
GCDH-201ENST00000222214 THNSL1Q8IYQ7 743 aa18.85■□□□□ 0.61
GCDH-201ENST00000222214 UBR7Q8N806 425 aa18.85■□□□□ 0.61
GCDH-201ENST00000222214 ELMO3Q96BJ8 720 aa18.85■□□□□ 0.61
GCDH-201ENST00000222214 FAM212AQ96EL1 285 aa18.85■□□□□ 0.61
GCDH-201ENST00000222214 EPB41L5Q9HCM4 733 aa18.85■□□□□ 0.61
GCDH-201ENST00000222214 RRN3P2A6NIE6 340 aa18.84■□□□□ 0.61
GCDH-201ENST00000222214 SART1O43290 800 aaKnown RBP18.84■□□□□ 0.61
GCDH-201ENST00000222214 RAD51CO43502 376 aa18.84■□□□□ 0.61
GCDH-201ENST00000222214 FGGP02679 453 aa18.84■□□□□ 0.61
GCDH-201ENST00000222214 GLI1P08151 1106 aa18.84■□□□□ 0.61
GCDH-201ENST00000222214 ZNF286BP0CG31 522 aa18.84■□□□□ 0.61
GCDH-201ENST00000222214 COMTP21964 271 aa18.84■□□□□ 0.61
GCDH-201ENST00000222214 ZNF132P52740 706 aa18.84■□□□□ 0.61
GCDH-201ENST00000222214 CDC42EP1Q00587 391 aa18.84■□□□□ 0.61
GCDH-201ENST00000222214 GUCY2DQ02846 1103 aa18.84■□□□□ 0.61
GCDH-201ENST00000222214 PPFIA1Q13136 1202 aa18.84■□□□□ 0.61
GCDH-201ENST00000222214 LIN9Q5TKA1 542 aa18.84■□□□□ 0.61
GCDH-201ENST00000222214 ZNF410Q86VK4 478 aa18.84■□□□□ 0.61
GCDH-201ENST00000222214 PLVAPQ9BX97 442 aa18.84■□□□□ 0.61
GCDH-201ENST00000222214 MINDY3Q9H8M7 445 aa18.84■□□□□ 0.61
GCDH-201ENST00000222214 ZHX1Q9UKY1 873 aaPredicted RBP18.84■□□□□ 0.61
GCDH-201ENST00000222214 A0A087WZ62 844 aa18.84■□□□□ 0.61
GCDH-201ENST00000222214 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.84■□□□□ 0.61
GCDH-201ENST00000222214 B4GALT5O43286 388 aa18.84■□□□□ 0.61
GCDH-201ENST00000222214 CST3P01034 146 aaPredicted RBP18.84■□□□□ 0.61
GCDH-201ENST00000222214 CTNNA1P35221 906 aaKnown RBP18.84■□□□□ 0.61
GCDH-201ENST00000222214 SLC1A1P43005 524 aa18.84■□□□□ 0.61
GCDH-201ENST00000222214 TFAMQ00059 246 aaKnown RBP18.84■□□□□ 0.61
GCDH-201ENST00000222214 CUL1Q13616 776 aa18.84■□□□□ 0.61
GCDH-201ENST00000222214 DCAF12L1Q5VU92 463 aa18.84■□□□□ 0.61
GCDH-201ENST00000222214 CD101Q93033 1021 aa18.84■□□□□ 0.61
GCDH-201ENST00000222214 FDXACB1Q9BRP7 624 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms