RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 MCCD1P59942 119 aaPredicted RBP21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 RAB30Q15771 203 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 SCARA3Q6AZY7 606 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 TRIM59Q8IWR1 403 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 BEST2Q8NFU1 509 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 SLC35C1Q96A29 364 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 ANKRD36BP1Q96IX9 119 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 MMRN2Q9H8L6 949 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 MSRAQ9UJ68 235 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 PLXNA4Q9HCM2 1894 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 SMTNL1A8MU46 457 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 BECN2A8MW95 431 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 KCNJ18B7U540 433 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 F8W810 466 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 XPOTO43592 962 aaKnown RBP21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 DNAJB2P25686 324 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 OR1G1P47890 313 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 SLC11A1P49279 550 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 CLCNKBP51801 687 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 BCAR1P56945 870 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 SMAD3P84022 425 aaKnown RBP21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 PPP3CAQ08209 521 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 KCNJ12Q14500 433 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 LRIT3Q3SXY7 679 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 FAM114A1Q8IWE2 563 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 C1orf127Q8N9H9 656 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 CLP1Q92989 425 aaKnown RBP21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 DPP3Q9NY33 737 aa21.04■□□□□ 0.96
SNAPC2-201ENST00000221573 NT5C1B-RDH14C9J2C7 533 aa21.03■□□□□ 0.96
SNAPC2-201ENST00000221573 PPEF2O14830 753 aa21.03■□□□□ 0.96
SNAPC2-201ENST00000221573 GALTP07902 379 aa21.03■□□□□ 0.96
SNAPC2-201ENST00000221573 ZNF18P17022 549 aa21.03■□□□□ 0.96
SNAPC2-201ENST00000221573 CYP3A5P20815 502 aa21.03■□□□□ 0.96
SNAPC2-201ENST00000221573 IGFBP6P24592 240 aaPredicted RBP21.03■□□□□ 0.96
SNAPC2-201ENST00000221573 GCLMP48507 274 aa21.03■□□□□ 0.96
SNAPC2-201ENST00000221573 ENPEPQ07075 957 aa21.03■□□□□ 0.96
SNAPC2-201ENST00000221573 DUOXA2Q1HG44 320 aa21.03■□□□□ 0.96
SNAPC2-201ENST00000221573 USP37Q86T82 979 aa21.03■□□□□ 0.96
SNAPC2-201ENST00000221573 COLGALT1Q8NBJ5 622 aa21.03■□□□□ 0.96
SNAPC2-201ENST00000221573 CACTINQ8WUQ7 758 aaKnown RBP21.03■□□□□ 0.96
SNAPC2-201ENST00000221573 MAGEC2Q9UBF1 373 aaPredicted RBP21.03■□□□□ 0.96
SNAPC2-201ENST00000221573 PRG3Q9Y2Y8 225 aaPredicted RBP21.03■□□□□ 0.96
SNAPC2-201ENST00000221573 NRP1O14786 923 aa21.02■□□□□ 0.96
SNAPC2-201ENST00000221573 TNNC2P02585 160 aa21.02■□□□□ 0.96
SNAPC2-201ENST00000221573 ITGB3P05106 788 aa21.02■□□□□ 0.96
SNAPC2-201ENST00000221573 LAG3P18627 525 aa21.02■□□□□ 0.96
SNAPC2-201ENST00000221573 LRPAP1P30533 357 aa21.02■□□□□ 0.96
SNAPC2-201ENST00000221573 MTIF2P46199 727 aaKnown RBP21.02■□□□□ 0.96
SNAPC2-201ENST00000221573 TAP1Q03518 808 aa21.02■□□□□ 0.96
SNAPC2-201ENST00000221573 TCP11X2Q5H9J9 407 aa21.02■□□□□ 0.96
SNAPC2-201ENST00000221573 TDRD10Q5VZ19 366 aaKnown RBP21.02■□□□□ 0.96
SNAPC2-201ENST00000221573 KCNT2Q6UVM3 1135 aa21.02■□□□□ 0.96
SNAPC2-201ENST00000221573 TRAPPC11Q7Z392 1133 aa21.02■□□□□ 0.96
SNAPC2-201ENST00000221573 TMEM173Q86WV6 379 aaPredicted RBP21.02■□□□□ 0.96
SNAPC2-201ENST00000221573 RNF214Q8ND24 703 aa21.02■□□□□ 0.96
SNAPC2-201ENST00000221573 C3orf58Q8NDZ4 430 aa21.02■□□□□ 0.96
SNAPC2-201ENST00000221573 CXorf38Q8TB03 319 aa21.02■□□□□ 0.96
SNAPC2-201ENST00000221573 TMEM175Q9BSA9 504 aa21.02■□□□□ 0.96
SNAPC2-201ENST00000221573 C17orf80Q9BSJ5 609 aa21.02■□□□□ 0.96
SNAPC2-201ENST00000221573 SIX4Q9UIU6 781 aa21.02■□□□□ 0.96
SNAPC2-201ENST00000221573 CHD9Q3L8U1 2897 aa21.01■□□□□ 0.95
SNAPC2-201ENST00000221573 PODXLO00592 558 aa21.01■□□□□ 0.95
SNAPC2-201ENST00000221573 C4BPAP04003 597 aaKnown RBP21.01■□□□□ 0.95
SNAPC2-201ENST00000221573 ATP1A3P13637 1013 aa21.01■□□□□ 0.95
SNAPC2-201ENST00000221573 UPP1Q16831 310 aa21.01■□□□□ 0.95
SNAPC2-201ENST00000221573 SV2AQ7L0J3 742 aa21.01■□□□□ 0.95
SNAPC2-201ENST00000221573 HASPINQ8TF76 798 aa21.01■□□□□ 0.95
SNAPC2-201ENST00000221573 BCL7CQ8WUZ0 217 aaPredicted RBP21.01■□□□□ 0.95
SNAPC2-201ENST00000221573 UROC1Q96N76 676 aa21.01■□□□□ 0.95
SNAPC2-201ENST00000221573 ZNF558Q96NG5 402 aa21.01■□□□□ 0.95
SNAPC2-201ENST00000221573 MTUS1Q9ULD2 1270 aa21.01■□□□□ 0.95
SNAPC2-201ENST00000221573 FAN1Q9Y2M0 1017 aa21.01■□□□□ 0.95
SNAPC2-201ENST00000221573 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.01■□□□□ 0.95
SNAPC2-201ENST00000221573 KIF4AO95239 1232 aa21■□□□□ 0.95
SNAPC2-201ENST00000221573 ITGB1P05556 798 aa21■□□□□ 0.95
SNAPC2-201ENST00000221573 EEF1GP26641 437 aaKnown RBP21■□□□□ 0.95
SNAPC2-201ENST00000221573 POLR2BP30876 1174 aaKnown RBP21■□□□□ 0.95
SNAPC2-201ENST00000221573 ALDH7A1P49419 539 aaKnown RBP21■□□□□ 0.95
SNAPC2-201ENST00000221573 BIRC3Q13489 604 aa21■□□□□ 0.95
SNAPC2-201ENST00000221573 ZACNQ401N2 412 aa21■□□□□ 0.95
SNAPC2-201ENST00000221573 CBWD6Q4V339 395 aa21■□□□□ 0.95
SNAPC2-201ENST00000221573 CBWD3Q5JTY5 395 aa21■□□□□ 0.95
SNAPC2-201ENST00000221573 CBWD5Q5RIA9 395 aa21■□□□□ 0.95
SNAPC2-201ENST00000221573 C9orf57Q5W0N0 161 aa21■□□□□ 0.95
SNAPC2-201ENST00000221573 PPP2R2DQ66LE6 453 aa21■□□□□ 0.95
SNAPC2-201ENST00000221573 C15orf39Q6ZRI6 1047 aa21■□□□□ 0.95
SNAPC2-201ENST00000221573 GAS2L3Q86XJ1 694 aa21■□□□□ 0.95
SNAPC2-201ENST00000221573 MARCH5Q9NX47 278 aa21■□□□□ 0.95
SNAPC2-201ENST00000221573 ITGA11Q9UKX5 1188 aa21■□□□□ 0.95
SNAPC2-201ENST00000221573 COL4A4P53420 1690 aaPredicted RBP21■□□□□ 0.95
SNAPC2-201ENST00000221573 ANO9A1A5B4 782 aa20.99■□□□□ 0.95
SNAPC2-201ENST00000221573 VNN1O95497 513 aa20.99■□□□□ 0.95
SNAPC2-201ENST00000221573 ALDH2P05091 517 aa20.99■□□□□ 0.95
SNAPC2-201ENST00000221573 KRT19P08727 400 aa20.99■□□□□ 0.95
SNAPC2-201ENST00000221573 CTNNB1P35222 781 aa20.99■□□□□ 0.95
SNAPC2-201ENST00000221573 AP3M2P53677 418 aa20.99■□□□□ 0.95
SNAPC2-201ENST00000221573 KCNH2Q12809 1159 aa20.99■□□□□ 0.95
SNAPC2-201ENST00000221573 TIFAQ96CG3 184 aa20.99■□□□□ 0.95
SNAPC2-201ENST00000221573 TUBGCP2Q9BSJ2 902 aa20.99■□□□□ 0.95
SNAPC2-201ENST00000221573 SLC28A3Q9HAS3 691 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms