RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.11□□□□□ -0.63
TRPS1-201ENST00000220888 DCTN3O75935 186 aa11.11□□□□□ -0.63
TRPS1-201ENST00000220888 KITP10721 976 aa11.11□□□□□ -0.63
TRPS1-201ENST00000220888 SSTR3P32745 418 aaPredicted RBP11.11□□□□□ -0.63
TRPS1-201ENST00000220888 PNPLA4P41247 253 aa11.11□□□□□ -0.63
TRPS1-201ENST00000220888 GUCA1AP43080 201 aaPredicted RBP11.11□□□□□ -0.63
TRPS1-201ENST00000220888 ACOT2P49753 483 aa11.11□□□□□ -0.63
TRPS1-201ENST00000220888 PDIA2Q13087 525 aaKnown RBP11.11□□□□□ -0.63
TRPS1-201ENST00000220888 ZNF177Q13360 481 aaPredicted RBP11.11□□□□□ -0.63
TRPS1-201ENST00000220888 MAPRE2Q15555 327 aa11.11□□□□□ -0.63
TRPS1-201ENST00000220888 B4GALNT2Q8NHY0 566 aa11.11□□□□□ -0.63
TRPS1-201ENST00000220888 AGAP3Q96P47 875 aa11.11□□□□□ -0.63
TRPS1-201ENST00000220888 PANX2Q96RD6 677 aa11.11□□□□□ -0.63
TRPS1-201ENST00000220888 PLEKHF1Q96S99 279 aa11.11□□□□□ -0.63
TRPS1-201ENST00000220888 NYAP2Q9P242 653 aa11.11□□□□□ -0.63
TRPS1-201ENST00000220888 NDUFB5O43674 189 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 ORC4O43929 436 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 H2AFYO75367 372 aaKnown RBP11.1□□□□□ -0.63
TRPS1-201ENST00000220888 RPLP2P05387 115 aaKnown RBP11.1□□□□□ -0.63
TRPS1-201ENST00000220888 TCF3P15923 654 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 CDC27P30260 824 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 SESN2P58004 480 aaPredicted RBP11.1□□□□□ -0.63
TRPS1-201ENST00000220888 ABCE1P61221 599 aaKnown RBP11.1□□□□□ -0.63
TRPS1-201ENST00000220888 NNTQ13423 1086 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 NUGGCQ68CJ6 796 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 C11orf96Q7Z7L8 435 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 ATP6V0D2Q8N8Y2 350 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 BHMTQ93088 406 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 NT5C1AQ9BXI3 368 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 ARHGEF38Q9NXL2 777 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 CRLS1Q9UJA2 301 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 RAB23Q9ULC3 237 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 SPAG7O75391 227 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 NPTXRO95502 500 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 KRT14P02533 472 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 MCF2P10911 925 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 EIF3EP60228 445 aaKnown RBP11.1□□□□□ -0.63
TRPS1-201ENST00000220888 C11orf57Q6ZUT1 292 aaPredicted RBP11.1□□□□□ -0.63
TRPS1-201ENST00000220888 ATP11CQ8NB49 1132 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 CCDC90BQ9GZT6 254 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 DTNAQ9Y4J8 743 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 AVPR1AP37288 418 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 PRKCEQ02156 737 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 TRADDQ15628 312 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 EZH2Q15910 746 aaKnown RBP11.1□□□□□ -0.63
TRPS1-201ENST00000220888 UGP2Q16851 508 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 ATXN7L3BQ96GX2 97 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 PLEKHA8Q96JA3 519 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 KDM5AP29375 1690 aaKnown RBP11.1□□□□□ -0.63
TRPS1-201ENST00000220888 A0A087WUV0 522 aaPredicted RBP11.1□□□□□ -0.63
TRPS1-201ENST00000220888 HEATR9A2RTY3 570 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 GUCA1CO95843 209 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 TAF6P49848 677 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 NCOA4Q13772 614 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 VSTM4Q8IW00 320 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 KRT78Q8N1N4 520 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 USP13Q92995 863 aaPredicted RBP11.1□□□□□ -0.63
TRPS1-201ENST00000220888 YY1AP1Q9H869 796 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 CAPN10Q9HC96 672 aa11.1□□□□□ -0.63
TRPS1-201ENST00000220888 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.1□□□□□ -0.63
TRPS1-201ENST00000220888 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.1□□□□□ -0.63
TRPS1-201ENST00000220888 DNMT1P26358 1616 aaKnown RBP11.09□□□□□ -0.63
TRPS1-201ENST00000220888 CDC42BPGQ6DT37 1551 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 CHUKO15111 745 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 MAFGO15525 162 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 MEFVO15553 781 aaPredicted RBP11.09□□□□□ -0.63
TRPS1-201ENST00000220888 MZF1P28698 734 aaPredicted RBP11.09□□□□□ -0.63
TRPS1-201ENST00000220888 PCSK7Q16549 785 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 P3H1Q32P28 736 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 CDC42EP5Q6NZY7 148 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 ZNF438Q7Z4V0 828 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 RNF168Q8IYW5 571 aaPredicted RBP11.09□□□□□ -0.63
TRPS1-201ENST00000220888 CINPQ9BW66 212 aaPredicted RBP11.09□□□□□ -0.63
TRPS1-201ENST00000220888 WNT8AQ9H1J5 351 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 PKD2L2Q9NZM6 624 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 NRBP1Q9UHY1 535 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 SLC2A3P11169 496 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 KPNA1P52294 538 aaPredicted RBP11.09□□□□□ -0.63
TRPS1-201ENST00000220888 C12orf60Q5U649 245 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 NUDCD3Q8IVD9 361 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 ZBED8Q8IZ13 594 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 SCUBE2Q9NQ36 999 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 THG1LQ9NWX6 298 aaKnown RBP11.09□□□□□ -0.63
TRPS1-201ENST00000220888 CD274Q9NZQ7 290 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 CFAP43Q8NDM7 1665 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 EIF3DO15371 548 aaKnown RBP eCLIP11.09□□□□□ -0.63
TRPS1-201ENST00000220888 BRAFP15056 766 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 NCKAP1LP55160 1127 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 NLRP11P59045 1033 aaKnown RBP11.09□□□□□ -0.63
TRPS1-201ENST00000220888 RESP18Q5W5W9 173 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 CYB5R4Q7L1T6 521 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 EPM2AIP1Q7L775 607 aaPredicted RBP11.09□□□□□ -0.63
TRPS1-201ENST00000220888 DEFB128Q7Z7B8 93 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 LRRC71Q8N4P6 559 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 ZNF579Q8NAF0 562 aaKnown RBP11.09□□□□□ -0.63
TRPS1-201ENST00000220888 KRT35Q92764 455 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 CYTH2Q99418 400 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 SLC13A1Q9BZW2 595 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 MTMR4Q9NYA4 1195 aa11.09□□□□□ -0.63
TRPS1-201ENST00000220888 ABCA5Q8WWZ7 1642 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms