RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 MAP7D3Q8IWC1 876 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 NME8Q8N427 588 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 C4orf32Q8N8J7 132 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 GLIS3Q8NEA6 775 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 ZBED3Q96IU2 234 aaPredicted RBP10□□□□□ -0.81
CCDC113-201ENST00000219299 CALN1Q9BXU9 219 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 SLC38A7Q9NVC3 462 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 PCDHB7Q9Y5E2 793 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 FHOD1Q9Y613 1164 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 UBR2Q8IWV8 1755 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 MOCS3O95396 460 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 GJB1P08034 283 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 GARTP22102 1010 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 RFX1P22670 979 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 FXR1P51114 621 aaKnown RBP eCLIP10□□□□□ -0.81
CCDC113-201ENST00000219299 PMS1P54277 932 aaKnown RBP10□□□□□ -0.81
CCDC113-201ENST00000219299 TNIP3Q96KP6 325 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 SGIP1Q9BQI5 828 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 MTMR12Q9C0I1 747 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 Q9H521 79 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 HDAC6Q9UBN7 1215 aa10□□□□□ -0.81
CCDC113-201ENST00000219299 KRIT1O00522 736 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 SCP2P22307 547 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 CXCR5P32302 372 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 SOX5P35711 763 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 ZKSCAN8Q15776 578 aaPredicted RBP9.99□□□□□ -0.81
CCDC113-201ENST00000219299 CCL14Q16627 93 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 TADA2BQ86TJ2 420 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 APPL2Q8NEU8 664 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 SEPT8Q92599 483 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 HPDLQ96IR7 371 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 VAV3Q9UKW4 847 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 C4AP0C0L4 1744 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 TJP1Q07157 1748 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 EVI5O60447 810 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 OPHN1O60890 802 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 FTLP02792 175 aaPredicted RBP9.99□□□□□ -0.81
CCDC113-201ENST00000219299 EIF4BP23588 611 aaKnown RBP9.99□□□□□ -0.81
CCDC113-201ENST00000219299 NR1I3Q14994 352 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 E2F5Q15329 346 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 SGO2Q562F6 1265 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 HSP90AA5PQ58FG0 334 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 RASAL3Q86YV0 1011 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 SPIRE2Q8WWL2 714 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 N4BP2L2Q92802 583 aaPredicted RBP9.99□□□□□ -0.81
CCDC113-201ENST00000219299 ANAPC7Q9UJX3 599 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 ZNF536O15090 1300 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 ACKR2O00590 384 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 SMIM10L2AP0DMW4 78 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 SMIM10L2BP0DMW5 78 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 CXCL8P10145 99 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 KCNA2P16389 499 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 CLK2P49760 499 aaKnown RBP9.99□□□□□ -0.81
CCDC113-201ENST00000219299 KLK7P49862 253 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 ECM1Q16610 540 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 DCAF4L1Q3SXM0 396 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 BSPRYQ5W0U4 402 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 PLPPR4Q7Z2D5 763 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 ABRAQ8N0Z2 381 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 TTC39CQ8N584 583 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 MRRFQ96E11 262 aaKnown RBP9.99□□□□□ -0.81
CCDC113-201ENST00000219299 GPR20Q99678 358 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 MYH3P11055 1940 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 IGLV3-22A0A075B6J6 115 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 TISP43B9A030 160 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 GPR25O00155 361 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 ZBTB24O43167 697 aaPredicted RBP9.99□□□□□ -0.81
CCDC113-201ENST00000219299 ABHD15Q6UXT9 468 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 TAB3Q8N5C8 712 aaPredicted RBP9.99□□□□□ -0.81
CCDC113-201ENST00000219299 DDX27Q96GQ7 796 aaKnown RBP9.99□□□□□ -0.81
CCDC113-201ENST00000219299 CHP1Q99653 195 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 CAPN11Q9UMQ6 739 aa9.99□□□□□ -0.81
CCDC113-201ENST00000219299 UBQLN1Q9UMX0 589 aaKnown RBP9.99□□□□□ -0.81
CCDC113-201ENST00000219299 AKAP5P24588 427 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 CCDC89Q8N998 374 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 PDLIM2Q96JY6 352 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 SYNGAP1Q96PV0 1343 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 EDEM3Q9BZQ6 932 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 FAM49BQ9NUQ9 324 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 MYH13Q9UKX3 1938 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 THSD7AQ9UPZ6 1657 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 PFDN1O60925 122 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 RPLP2P05387 115 aaKnown RBP9.98□□□□□ -0.81
CCDC113-201ENST00000219299 GLRA2P23416 452 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 CASP5P51878 434 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 CASP8Q14790 479 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 KCTD16Q68DU8 428 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 TTC19Q6DKK2 380 aaPredicted RBP9.98□□□□□ -0.81
CCDC113-201ENST00000219299 GJB7Q6PEY0 223 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 ASAP3Q8TDY4 903 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 HINFPQ9BQA5 517 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 STK33Q9BYT3 514 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 SNTG2Q9NY99 539 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 PIK3R2O00459 728 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 CABYRO75952 493 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 ARL1P40616 181 aaPredicted RBP9.98□□□□□ -0.81
CCDC113-201ENST00000219299 ALDH7A1P49419 539 aaKnown RBP9.98□□□□□ -0.81
CCDC113-201ENST00000219299 PSMC1P62191 440 aaKnown RBP9.98□□□□□ -0.81
CCDC113-201ENST00000219299 ITIH3Q06033 890 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 PPP2R5DQ14738 602 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms