RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 MCM8Q9UJA3 840 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 ACTL7BQ9Y614 415 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 ADGRA3Q8IWK6 1321 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 HNRNPDLO14979 420 aaKnown RBP14.17□□□□□ -0.14
SRP54-201ENST00000216774 ATP6V1G2O95670 118 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 CYP1A1P04798 512 aaPredicted RBP14.17□□□□□ -0.14
SRP54-201ENST00000216774 EZRP15311 586 aaKnown RBP14.17□□□□□ -0.14
SRP54-201ENST00000216774 KYNUQ16719 465 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 CRELD2Q6UXH1 353 aaPredicted RBP14.17□□□□□ -0.14
SRP54-201ENST00000216774 CPXCR1Q8N123 301 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 BSNDQ8WZ55 320 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 PDCD2LQ9BRP1 358 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 FOXP3Q9BZS1 431 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 TRIM7Q9C029 511 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 KIAA1586Q9HCI6 787 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 ABCF3Q9NUQ8 709 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 FGFR1OP2Q9NVK5 253 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 NINJ2Q9NZG7 142 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 PCDHA10Q9Y5I2 948 aa14.17□□□□□ -0.14
SRP54-201ENST00000216774 CDH16O75309 829 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 POTEJP0CG39 1038 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 LRRC14Q15048 493 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 LLGL1Q15334 1064 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 GALNTL6Q49A17 601 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 LIN9Q5TKA1 542 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 TRIM72Q6ZMU5 477 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 MON1BQ7L1V2 547 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 RHOT1Q8IXI2 618 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 MTMR14Q8NCE2 650 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 MCPH1Q8NEM0 835 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 CPA5Q8WXQ8 436 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 RMDN3Q96TC7 470 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 HERPUD2Q9BSE4 406 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 RAVER2Q9HCJ3 691 aaKnown RBP14.16□□□□□ -0.14
SRP54-201ENST00000216774 PXMP2Q9NR77 195 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 HOMER2Q9NSB8 354 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 PGAP2Q9UHJ9 254 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 H0YCG3 227 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 DKC1O60832 514 aaKnown RBP eCLIP14.16□□□□□ -0.14
SRP54-201ENST00000216774 GJB6O95452 261 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 MYCLP12524 364 aaPredicted RBP14.16□□□□□ -0.14
SRP54-201ENST00000216774 BRAFP15056 766 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 STAT4Q14765 748 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 FAM133BQ5BKY9 247 aaKnown RBP14.16□□□□□ -0.14
SRP54-201ENST00000216774 WDR44Q5JSH3 913 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 PPP1R2P3Q6NXS1 205 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 ARHGEF18Q6ZSZ5 1173 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 ZNF365Q70YC5 407 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 TRMT1LQ7Z2T5 733 aaKnown RBP14.16□□□□□ -0.14
SRP54-201ENST00000216774 CEP57Q86XR8 500 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 KATNAL2Q8IYT4 538 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.16□□□□□ -0.14
SRP54-201ENST00000216774 MGARPQ8TDB4 240 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 VCPIP1Q96JH7 1222 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 CEP170P1Q96L14 293 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 CCDC77Q9BR77 488 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 FAM213AQ9BRX8 229 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 PI4K2AQ9BTU6 479 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 KIAA1683Q9H0B3 1180 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 MRPL47Q9HD33 250 aaKnown RBP14.16□□□□□ -0.14
SRP54-201ENST00000216774 R3HDM2Q9Y2K5 976 aaKnown RBP14.16□□□□□ -0.14
SRP54-201ENST00000216774 ARL2BPQ9Y2Y0 163 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 CD2APQ9Y5K6 639 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 UMODL1Q5DID0 1318 aa14.16□□□□□ -0.14
SRP54-201ENST00000216774 RALAP11233 206 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 CREB1P16220 341 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 MKRN4PQ13434 485 aaPredicted RBP14.15□□□□□ -0.14
SRP54-201ENST00000216774 TRIP13Q15645 432 aaPredicted RBP14.15□□□□□ -0.14
SRP54-201ENST00000216774 NUGGCQ68CJ6 796 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 SPATA21Q7Z572 469 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 ATP6V0A1Q93050 837 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 NOD2Q9HC29 1040 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 KCNK9Q9NPC2 374 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 TESPA1A2RU30 521 aaPredicted RBP14.15□□□□□ -0.14
SRP54-201ENST00000216774 MAFGO15525 162 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 C21orf2O43822 256 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 EXTL3O43909 919 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 DGAT1O75907 488 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 RAD17O75943 681 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 UBOX5O94941 541 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 ABHD2P08910 425 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 ZNF268Q14587 947 aaPredicted RBP14.15□□□□□ -0.14
SRP54-201ENST00000216774 PSMD6Q15008 389 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 ARHGEF16Q5VV41 709 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 PPP1R21Q6ZMI0 780 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 NLRX1Q86UT6 975 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 RIBC1Q8N443 379 aaPredicted RBP14.15□□□□□ -0.14
SRP54-201ENST00000216774 EXD1Q8NHP7 514 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 GPRASP2Q96D09 838 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 FAM212AQ96EL1 285 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 PDLIM7Q9NR12 457 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 ARHGAP28Q9P2N2 729 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 CTNNAL1Q9UBT7 734 aa14.15□□□□□ -0.14
SRP54-201ENST00000216774 NF2P35240 595 aa14.14□□□□□ -0.15
SRP54-201ENST00000216774 LMNB2Q03252 620 aa14.14□□□□□ -0.15
SRP54-201ENST00000216774 BNIP1Q12981 228 aa14.14□□□□□ -0.15
SRP54-201ENST00000216774 ZACNQ401N2 412 aa14.14□□□□□ -0.15
SRP54-201ENST00000216774 LARGE2Q8N3Y3 721 aa14.14□□□□□ -0.15
SRP54-201ENST00000216774 ANKRD42Q8N9B4 389 aa14.14□□□□□ -0.15
SRP54-201ENST00000216774 GIMAP7Q8NHV1 300 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms