RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 NENFQ9UMX5 172 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 BRCA2P51587 3418 aa16.05■□□□□ 0.16
EFNB1-201ENST00000204961 F8VP50 259 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 NR3C2P08235 984 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 BRD2P25440 801 aaKnown RBP16.04■□□□□ 0.16
EFNB1-201ENST00000204961 GCLCP48506 637 aaPredicted RBP16.04■□□□□ 0.16
EFNB1-201ENST00000204961 CLNS1AP54105 237 aaKnown RBP16.04■□□□□ 0.16
EFNB1-201ENST00000204961 CDR2Q01850 454 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 DRP2Q13474 957 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 DHX34Q14147 1143 aaKnown RBP16.04■□□□□ 0.16
EFNB1-201ENST00000204961 C6orf118Q5T5N4 469 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 EMC1Q8N766 993 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 TGS1Q96RS0 853 aaKnown RBP16.04■□□□□ 0.16
EFNB1-201ENST00000204961 TMEM121Q9BTD3 319 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 KLRG2A4D1S0 409 aaPredicted RBP16.04■□□□□ 0.16
EFNB1-201ENST00000204961 PIK3CDO00329 1044 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 FSBPO95073 299 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 PSMC5P62195 406 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 TFAMQ00059 246 aaKnown RBP16.04■□□□□ 0.16
EFNB1-201ENST00000204961 GPS1Q13098 491 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 TRIM50Q86XT4 487 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 LRRC71Q8N4P6 559 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 CLEC4DQ8WXI8 215 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 KLHL29Q96CT2 875 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 PDCD2LQ9BRP1 358 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 FBXO40Q9UH90 709 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 HERC5Q9UII4 1024 aaKnown RBP16.04■□□□□ 0.16
EFNB1-201ENST00000204961 INTUQ9ULD6 942 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 FAM187AA6NFU0 413 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 MIF4GDA9UHW6 222 aaKnown RBP16.04■□□□□ 0.16
EFNB1-201ENST00000204961 SGK1O00141 431 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 ASNSP08243 561 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 TNFSF9P41273 254 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 GSCP56915 257 aaPredicted RBP16.04■□□□□ 0.16
EFNB1-201ENST00000204961 SESN3P58005 492 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 CNTN2Q02246 1040 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 ARHGAP27Q6ZUM4 889 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 NETO2Q8NC67 525 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 FAM167BQ9BTA0 163 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 ECT2Q9H8V3 914 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 AAASQ9NRG9 546 aa16.04■□□□□ 0.16
EFNB1-201ENST00000204961 WDR64B1ANS9 1081 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 IGF2BP3O00425 579 aaKnown RBP eCLIP16.03■□□□□ 0.16
EFNB1-201ENST00000204961 GRAP2O75791 330 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 ICAM1P05362 532 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 GNA15P30679 374 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 ELF1P32519 619 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 CXCL9Q07325 125 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 NEDD9Q14511 834 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 TRIM68Q6AZZ1 485 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 C6orf89Q6UWU4 347 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 TRPM8Q7Z2W7 1104 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 FAM228AQ86W67 206 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 ZBED8Q8IZ13 594 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 MCEEQ96PE7 176 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 RBM15Q96T37 977 aaKnown RBP eCLIP16.03■□□□□ 0.16
EFNB1-201ENST00000204961 WNT8AQ9H1J5 351 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 FEM1BQ9UK73 627 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 DNPEPQ9ULA0 475 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 DPEP1P16444 411 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 IGBP1P78318 339 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 PRKCEQ02156 737 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 CNGA2Q16280 664 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 ACAD10Q6JQN1 1059 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 ATXN2LQ8WWM7 1075 aaKnown RBP16.03■□□□□ 0.16
EFNB1-201ENST00000204961 RMDN2Q96LZ7 410 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 RIT2Q99578 217 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 NAALADL1Q9UQQ1 740 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 MAST2Q6P0Q8 1798 aa16.03■□□□□ 0.16
EFNB1-201ENST00000204961 EXOC1LA0A1B0GW35 172 aa16.02■□□□□ 0.16
EFNB1-201ENST00000204961 PODXLO00592 558 aa16.02■□□□□ 0.16
EFNB1-201ENST00000204961 GAS8O95995 478 aa16.02■□□□□ 0.16
EFNB1-201ENST00000204961 KRT1P04264 644 aa16.02■□□□□ 0.16
EFNB1-201ENST00000204961 PAX7P23759 505 aa16.02■□□□□ 0.16
EFNB1-201ENST00000204961 RAP1GAPP47736 663 aa16.02■□□□□ 0.16
EFNB1-201ENST00000204961 EFTUD2Q15029 972 aaKnown RBP eCLIP16.02■□□□□ 0.16
EFNB1-201ENST00000204961 C1orf131Q8NDD1 294 aaKnown RBP16.02■□□□□ 0.16
EFNB1-201ENST00000204961 SHC3Q92529 594 aa16.02■□□□□ 0.16
EFNB1-201ENST00000204961 PAGR1Q9BTK6 254 aa16.02■□□□□ 0.16
EFNB1-201ENST00000204961 PCDHA3Q9Y5H8 950 aa16.02■□□□□ 0.16
EFNB1-201ENST00000204961 MMP14P50281 582 aa16.02■□□□□ 0.16
EFNB1-201ENST00000204961 EIF3BP55884 814 aaKnown RBP16.02■□□□□ 0.16
EFNB1-201ENST00000204961 CDO1Q16878 200 aa16.02■□□□□ 0.16
EFNB1-201ENST00000204961 VSIG1Q86XK7 387 aa16.02■□□□□ 0.16
EFNB1-201ENST00000204961 CCT6BQ92526 530 aa16.02■□□□□ 0.16
EFNB1-201ENST00000204961 TLCD1Q96CP7 247 aa16.02■□□□□ 0.16
EFNB1-201ENST00000204961 IFT74Q96LB3 600 aa16.02■□□□□ 0.16
EFNB1-201ENST00000204961 NKIRAS1Q9NYS0 192 aa16.02■□□□□ 0.16
EFNB1-201ENST00000204961 CYP24A1Q07973 514 aa16.02■□□□□ 0.15
EFNB1-201ENST00000204961 NIM1KQ8IY84 436 aa16.02■□□□□ 0.15
EFNB1-201ENST00000204961 MCOLN2Q8IZK6 566 aa16.02■□□□□ 0.15
EFNB1-201ENST00000204961 DEPTORQ8TB45 409 aa16.02■□□□□ 0.15
EFNB1-201ENST00000204961 TRAPPC12Q8WVT3 735 aa16.02■□□□□ 0.15
EFNB1-201ENST00000204961 MSTO1Q9BUK6 570 aa16.02■□□□□ 0.15
EFNB1-201ENST00000204961 OSBPL8Q9BZF1 889 aa16.02■□□□□ 0.15
EFNB1-201ENST00000204961 NINJ2Q9NZG7 142 aa16.02■□□□□ 0.15
EFNB1-201ENST00000204961 PCDHA10Q9Y5I2 948 aa16.02■□□□□ 0.15
EFNB1-201ENST00000204961 MROH7Q68CQ1 1323 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 A6NNZ2 444 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 K7ERI5 159 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms