RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 ZBTB5O15062 677 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 STK10O94804 968 aaKnown RBP12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 MYBP10242 640 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 GRB10Q13322 594 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 MED21Q13503 144 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 DARS2Q6PI48 645 aaKnown RBP12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 DEPTORQ8TB45 409 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 ATG4CQ96DT6 458 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 PARK7Q99497 189 aaKnown RBP12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 TRIM56Q9BRZ2 755 aaKnown RBP12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 THTPAQ9BU02 230 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 METTL5Q9NRN9 209 aaKnown RBP12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 MARCOQ9UEW3 520 aaPredicted RBP12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 TTLL3Q9Y4R7 772 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 PI4K2BG5E9Z4 385 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 RARGP13631 454 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 PEX3P56589 373 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 MMEL1Q495T6 779 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 ZNF354CQ86Y25 554 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 RBM46Q8TBY0 533 aaKnown RBP12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 WDR11Q9BZH6 1224 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 TRAF3IP3Q9Y228 551 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 B2RBV5 119 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 FANCGO15287 622 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 CD58P19256 250 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 ANXA13P27216 316 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 COILP38432 576 aaPredicted RBP12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 FMO5P49326 533 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 ARSEP51690 589 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 VAMP7P51809 220 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 LAMB3Q13751 1172 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 COG2Q14746 738 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 RGMBQ6NW40 437 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 REEP2Q9BRK0 252 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 ZWILCHQ9H900 591 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 SENP1Q9P0U3 644 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 APEX2Q9UBZ4 518 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 SMG5Q9UPR3 1016 aaKnown RBP12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 PDE4DIPQ5VU43 2346 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 IRF6O14896 467 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 SERPINB3P29508 390 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 ACCSLQ4AC99 568 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 CDKL2Q92772 493 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 SERPINB12Q96P63 405 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 CDC42EP4Q9H3Q1 356 aaKnown RBP12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 KLHL11Q9NVR0 708 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 PHTF1Q9UMS5 762 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 TACC3Q9Y6A5 838 aa12.2□□□□□ -0.46
DNMT3B-201ENST00000201963 LRRIQ4A6NIV6 560 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 DKC1O60832 514 aaKnown RBP eCLIP12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 NOP14P78316 857 aaKnown RBP12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 THOC5Q13769 683 aaKnown RBP12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 ZNF394Q53GI3 561 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 THEMIS2Q5TEJ8 643 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 MTBPQ96DY7 904 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 SCYL1Q96KG9 808 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 CAPNS2Q96L46 248 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 TSSK1BQ9BXA7 367 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 UBXN6Q9BZV1 441 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 SMYD2Q9NRG4 433 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 MCM8Q9UJA3 840 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 APOBEC2Q9Y235 224 aaKnown RBP12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 RASA1P20936 1047 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 HOXD10P28358 340 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 GTF2A2P52657 109 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 PHEXP78562 749 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 DGKZQ13574 1117 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 P3H1Q32P28 736 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 LVRNQ6Q4G3 990 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 PCGF5Q86SE9 256 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 ERICH1Q86X53 443 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 IRF2BP1Q8IU81 584 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 CD302Q8IX05 232 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 NEDD1Q8NHV4 660 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 SPATA20Q8TB22 786 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 PRPF31Q8WWY3 499 aaKnown RBP12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 ATG4AQ8WYN0 398 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 TMEM237Q96Q45 408 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 TRIM17Q9Y577 477 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 LRRC37A3O60309 1634 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 PJA2O43164 708 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 GMNNO75496 209 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 OLFML2BQ68BL8 750 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 RNF169Q8NCN4 708 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 FAM81BQ96LP2 452 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 MOV10L1Q9BXT6 1211 aaKnown RBP12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 MIS12Q9H081 205 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 AP5M1Q9H0R1 490 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 DCLRE1BQ9H816 532 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 RXFP1Q9HBX9 757 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 KMT5AQ9NQR1 393 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 RHBDL2Q9NX52 303 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 GGA2Q9UJY4 613 aa12.19□□□□□ -0.46
DNMT3B-201ENST00000201963 WDR64B1ANS9 1081 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 RTN2O75298 545 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 MAGEA4P43358 317 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 KLHL38Q2WGJ6 581 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 SLC13A5Q86YT5 568 aaPredicted RBP12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 MAP7D3Q8IWC1 876 aa12.18□□□□□ -0.46
DNMT3B-201ENST00000201963 ATP11CQ8NB49 1132 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms