RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 RAET1EQ8TD07 263 aa21.16■□□□□ 0.98
TNFRSF1A-201ENST00000162749 SLC20A1Q8WUM9 679 aa21.16■□□□□ 0.98
TNFRSF1A-201ENST00000162749 FAM81BQ96LP2 452 aa21.16■□□□□ 0.98
TNFRSF1A-201ENST00000162749 ACP6Q9NPH0 428 aa21.16■□□□□ 0.98
TNFRSF1A-201ENST00000162749 CAPN6Q9Y6Q1 641 aa21.16■□□□□ 0.98
TNFRSF1A-201ENST00000162749 PDCD11Q14690 1871 aaKnown RBP21.16■□□□□ 0.98
TNFRSF1A-201ENST00000162749 GNRH1P01148 92 aa21.16■□□□□ 0.98
TNFRSF1A-201ENST00000162749 POU5F1Q01860 360 aaKnown RBP21.16■□□□□ 0.98
TNFRSF1A-201ENST00000162749 KCNA10Q16322 511 aa21.16■□□□□ 0.98
TNFRSF1A-201ENST00000162749 DNAAF5Q86Y56 855 aa21.16■□□□□ 0.98
TNFRSF1A-201ENST00000162749 NME8Q8N427 588 aa21.16■□□□□ 0.98
TNFRSF1A-201ENST00000162749 PXYLP1Q8TE99 480 aa21.16■□□□□ 0.98
TNFRSF1A-201ENST00000162749 FAM53CQ9NYF3 392 aa21.16■□□□□ 0.98
TNFRSF1A-201ENST00000162749 CTAGE9A4FU28 777 aa21.15■□□□□ 0.98
TNFRSF1A-201ENST00000162749 ASS1P00966 412 aaKnown RBP21.15■□□□□ 0.98
TNFRSF1A-201ENST00000162749 MYCNP04198 464 aaPredicted RBP21.15■□□□□ 0.98
TNFRSF1A-201ENST00000162749 TMEM191BP0C7N4 346 aa21.15■□□□□ 0.98
TNFRSF1A-201ENST00000162749 CST5P28325 142 aaPredicted RBP21.15■□□□□ 0.98
TNFRSF1A-201ENST00000162749 KYAT1Q16773 422 aa21.15■□□□□ 0.98
TNFRSF1A-201ENST00000162749 SLC10A6Q3KNW5 377 aa21.15■□□□□ 0.98
TNFRSF1A-201ENST00000162749 GDF6Q6KF10 455 aaPredicted RBP21.15■□□□□ 0.98
TNFRSF1A-201ENST00000162749 SLC47A2Q86VL8 602 aa21.15■□□□□ 0.98
TNFRSF1A-201ENST00000162749 PALB2Q86YC2 1186 aa21.15■□□□□ 0.98
TNFRSF1A-201ENST00000162749 NUB1Q9Y5A7 615 aa21.15■□□□□ 0.98
TNFRSF1A-201ENST00000162749 LACTBL1A8MY62 500 aa21.14■□□□□ 0.98
TNFRSF1A-201ENST00000162749 SGPL1O95470 568 aa21.14■□□□□ 0.98
TNFRSF1A-201ENST00000162749 U2AF1L4Q8WU68 220 aaKnown RBP21.14■□□□□ 0.98
TNFRSF1A-201ENST00000162749 AGPAT1Q99943 283 aa21.14■□□□□ 0.98
TNFRSF1A-201ENST00000162749 IMPG2Q9BZV3 1241 aa21.14■□□□□ 0.98
TNFRSF1A-201ENST00000162749 CDC23Q9UJX2 597 aa21.14■□□□□ 0.98
TNFRSF1A-201ENST00000162749 NOCTQ9UK39 431 aaKnown RBP21.14■□□□□ 0.98
TNFRSF1A-201ENST00000162749 UMODL1Q5DID0 1318 aa21.14■□□□□ 0.97
TNFRSF1A-201ENST00000162749 NFICP08651 508 aa21.14■□□□□ 0.97
TNFRSF1A-201ENST00000162749 CUL2Q13617 745 aa21.14■□□□□ 0.97
TNFRSF1A-201ENST00000162749 DCAF4L1Q3SXM0 396 aa21.14■□□□□ 0.97
TNFRSF1A-201ENST00000162749 SLC27A1Q6PCB7 646 aa21.14■□□□□ 0.97
TNFRSF1A-201ENST00000162749 NOP9Q86U38 636 aaKnown RBP21.14■□□□□ 0.97
TNFRSF1A-201ENST00000162749 ZNF296Q8WUU4 475 aaPredicted RBP21.14■□□□□ 0.97
TNFRSF1A-201ENST00000162749 ANKRD36BP1Q96IX9 119 aa21.14■□□□□ 0.97
TNFRSF1A-201ENST00000162749 NAPGQ99747 312 aaPredicted RBP21.14■□□□□ 0.97
TNFRSF1A-201ENST00000162749 ASB7Q9H672 318 aa21.14■□□□□ 0.97
TNFRSF1A-201ENST00000162749 DDX20Q9UHI6 824 aaKnown RBP21.14■□□□□ 0.97
TNFRSF1A-201ENST00000162749 MOCS3O95396 460 aa21.13■□□□□ 0.97
TNFRSF1A-201ENST00000162749 CRYBB1P53674 252 aaPredicted RBP21.13■□□□□ 0.97
TNFRSF1A-201ENST00000162749 NOTUMQ6P988 496 aa21.13■□□□□ 0.97
TNFRSF1A-201ENST00000162749 TRIM58Q8NG06 486 aa21.13■□□□□ 0.97
TNFRSF1A-201ENST00000162749 ATP8B3O60423 1300 aa21.13■□□□□ 0.97
TNFRSF1A-201ENST00000162749 MROH7Q68CQ1 1323 aa21.13■□□□□ 0.97
TNFRSF1A-201ENST00000162749 CYP11B1P15538 503 aa21.13■□□□□ 0.97
TNFRSF1A-201ENST00000162749 TNFAIP3P21580 790 aa21.13■□□□□ 0.97
TNFRSF1A-201ENST00000162749 MYL6P60660 151 aa21.13■□□□□ 0.97
TNFRSF1A-201ENST00000162749 FAM47CQ5HY64 1035 aa21.13■□□□□ 0.97
TNFRSF1A-201ENST00000162749 JADE1Q6IE81 842 aa21.13■□□□□ 0.97
TNFRSF1A-201ENST00000162749 ACAP3Q96P50 834 aa21.13■□□□□ 0.97
TNFRSF1A-201ENST00000162749 SCN1AP35498 2009 aa21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 FKTNO75072 461 aa21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 CLSTN1O94985 981 aa21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 NPTXRO95502 500 aa21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 TNNC2P02585 160 aa21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 KRT5P13647 590 aa21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 GRM5P41594 1212 aa21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 TEX35Q5T0J7 233 aa21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 RNF10Q8N5U6 811 aaKnown RBP21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 EIF2AQ9BY44 585 aaKnown RBP21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 SEPT11Q9NVA2 429 aaKnown RBP21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 GRIN2DO15399 1336 aa21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 ENC1O14682 589 aa21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 BUB1O43683 1085 aa21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 TFRCP02786 760 aaKnown RBP21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 ZSCAN20P17040 1043 aaPredicted RBP21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 ACO1P21399 889 aaKnown RBP21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 TBXAS1P24557 533 aaPredicted RBP21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 TRPC3Q13507 836 aa21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 RPUSD2Q8IZ73 545 aaKnown RBP21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 GPR161Q8N6U8 529 aaKnown RBP21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 WNT8BQ93098 351 aa21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 TAS2R14Q9NYV8 317 aa21.12■□□□□ 0.97
TNFRSF1A-201ENST00000162749 TACC1O75410 805 aa21.11■□□□□ 0.97
TNFRSF1A-201ENST00000162749 H2AFZP0C0S5 128 aa21.11■□□□□ 0.97
TNFRSF1A-201ENST00000162749 CHRNB2P17787 502 aa21.11■□□□□ 0.97
TNFRSF1A-201ENST00000162749 PDE6CP51160 858 aa21.11■□□□□ 0.97
TNFRSF1A-201ENST00000162749 SGSM1Q2NKQ1 1148 aa21.11■□□□□ 0.97
TNFRSF1A-201ENST00000162749 H2AFVQ71UI9 128 aa21.11■□□□□ 0.97
TNFRSF1A-201ENST00000162749 SERINC5Q86VE9 423 aa21.11■□□□□ 0.97
TNFRSF1A-201ENST00000162749 SESTD1Q86VW0 696 aa21.11■□□□□ 0.97
TNFRSF1A-201ENST00000162749 C1orf127Q8N9H9 656 aa21.11■□□□□ 0.97
TNFRSF1A-201ENST00000162749 PCSK9Q8NBP7 692 aaKnown RBP21.11■□□□□ 0.97
TNFRSF1A-201ENST00000162749 NOX5Q96PH1 765 aa21.11■□□□□ 0.97
TNFRSF1A-201ENST00000162749 CELF4Q9BZC1 486 aaKnown RBP21.11■□□□□ 0.97
TNFRSF1A-201ENST00000162749 XYLT2Q9H1B5 865 aa21.11■□□□□ 0.97
TNFRSF1A-201ENST00000162749 PIN4Q9Y237 131 aaKnown RBP21.11■□□□□ 0.97
TNFRSF1A-201ENST00000162749 BTNL10A8MVZ5 291 aa21.1■□□□□ 0.97
TNFRSF1A-201ENST00000162749 TMCO5BA8MYB1 307 aa21.1■□□□□ 0.97
TNFRSF1A-201ENST00000162749 ZRANB2O95218 330 aaKnown RBP eCLIP21.1■□□□□ 0.97
TNFRSF1A-201ENST00000162749 AXLP30530 894 aa21.1■□□□□ 0.97
TNFRSF1A-201ENST00000162749 TAF3Q5VWG9 929 aa21.1■□□□□ 0.97
TNFRSF1A-201ENST00000162749 DDX1Q92499 740 aaKnown RBP21.1■□□□□ 0.97
TNFRSF1A-201ENST00000162749 RABGGTAQ92696 567 aa21.1■□□□□ 0.97
TNFRSF1A-201ENST00000162749 SIX4Q9UIU6 781 aa21.1■□□□□ 0.97
TNFRSF1A-201ENST00000162749 INTUQ9ULD6 942 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms