RNA–Protein interactions for RNA: ENST00000013034.3

NME1-201, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3 BASIC

Gene NME1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-201ENST00000013034 TTC12Q9H892 705 aaPredicted RBP12.3□□□□□ -0.44
NME1-201ENST00000013034 GPRC5CQ9NQ84 441 aa12.3□□□□□ -0.44
NME1-201ENST00000013034 RAB23Q9ULC3 237 aa12.3□□□□□ -0.44
NME1-201ENST00000013034 MTMR6Q9Y217 621 aa12.3□□□□□ -0.44
NME1-201ENST00000013034 ACACBO00763 2458 aa12.29□□□□□ -0.44
NME1-201ENST00000013034 ARHGEF37A1IGU5 675 aa12.29□□□□□ -0.44
NME1-201ENST00000013034 FAM205CA6NFA0 338 aa12.29□□□□□ -0.44
NME1-201ENST00000013034 TRAPPC3O43617 180 aa12.29□□□□□ -0.44
NME1-201ENST00000013034 PRPF40AO75400 957 aaKnown RBP12.29□□□□□ -0.44
NME1-201ENST00000013034 B3GAT3O94766 335 aa12.29□□□□□ -0.44
NME1-201ENST00000013034 LARGE1O95461 756 aa12.29□□□□□ -0.44
NME1-201ENST00000013034 LRG1P02750 347 aa12.29□□□□□ -0.44
NME1-201ENST00000013034 TDGF1P13385 188 aa12.29□□□□□ -0.44
NME1-201ENST00000013034 CEBPBP17676 345 aa12.29□□□□□ -0.44
NME1-201ENST00000013034 NAMPTP43490 491 aa12.29□□□□□ -0.44
NME1-201ENST00000013034 MTAPQ13126 283 aa12.29□□□□□ -0.44
NME1-201ENST00000013034 NR5A1Q13285 461 aa12.29□□□□□ -0.44
NME1-201ENST00000013034 LAIR1Q6GTX8 287 aa12.29□□□□□ -0.44
NME1-201ENST00000013034 TSSK4Q6SA08 328 aa12.29□□□□□ -0.44
NME1-201ENST00000013034 MAMSTRQ6ZN01 415 aa12.29□□□□□ -0.44
NME1-201ENST00000013034 FAM184AQ8NB25 1140 aa12.29□□□□□ -0.44
NME1-201ENST00000013034 TNFRSF25Q93038 417 aa12.29□□□□□ -0.44
NME1-201ENST00000013034 MCRS1Q96EZ8 462 aa12.29□□□□□ -0.44
NME1-201ENST00000013034 PPP1R10Q96QC0 940 aaKnown RBP12.29□□□□□ -0.44
NME1-201ENST00000013034 LARP6Q9BRS8 491 aaKnown RBP12.29□□□□□ -0.44
NME1-201ENST00000013034 SCAND2PQ9GZW5 306 aaPredicted RBP12.29□□□□□ -0.44
NME1-201ENST00000013034 CCDC113Q9H0I3 377 aa12.29□□□□□ -0.44
NME1-201ENST00000013034 GJB4Q9NTQ9 266 aa12.29□□□□□ -0.44
NME1-201ENST00000013034 TPRP12270 2363 aaKnown RBP12.28□□□□□ -0.44
NME1-201ENST00000013034 SHISA7A6NL88 538 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 TTLL13PA6NNM8 815 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 ACKR2O00590 384 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 LRP3O75074 770 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 KRT37O76014 449 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 MICAL2O94851 1124 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 ADRB1P08588 477 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 ATP2B1P20020 1258 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 TGM1P22735 817 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 FCARP24071 287 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 TKTP29401 623 aaKnown RBP12.28□□□□□ -0.44
NME1-201ENST00000013034 CCR3P51677 355 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 UBE2HP62256 183 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 KRT85P78386 507 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 ROR1Q01973 937 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 FZD5Q13467 585 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 PPP2R5AQ15172 486 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 SLC8B1Q6J4K2 584 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 MAEAQ7L5Y9 396 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 APBB1IPQ7Z5R6 666 aaPredicted RBP12.28□□□□□ -0.44
NME1-201ENST00000013034 NOSTRINQ8IVI9 506 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 ZNF687Q8N1G0 1237 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 NETO1Q8TDF5 533 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 PLA2G2FQ9BZM2 168 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 BRD9Q9H8M2 597 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 TUFT1Q9NNX1 390 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 PARD6AQ9NPB6 346 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 TRPV5Q9NQA5 729 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 NDRG2Q9UN36 371 aaKnown RBP12.28□□□□□ -0.44
NME1-201ENST00000013034 VWA8A3KMH1 1905 aa12.28□□□□□ -0.44
NME1-201ENST00000013034 PRRG1O14668 218 aa12.27□□□□□ -0.45
NME1-201ENST00000013034 ZNF197O14709 1029 aa12.27□□□□□ -0.45
NME1-201ENST00000013034 PTPN2P17706 415 aa12.27□□□□□ -0.45
NME1-201ENST00000013034 ELF1P32519 619 aa12.27□□□□□ -0.45
NME1-201ENST00000013034 TXKP42681 527 aa12.27□□□□□ -0.45
NME1-201ENST00000013034 CLCNKBP51801 687 aa12.27□□□□□ -0.45
NME1-201ENST00000013034 ST3GAL1Q11201 340 aa12.27□□□□□ -0.45
NME1-201ENST00000013034 UPP1Q16831 310 aa12.27□□□□□ -0.45
NME1-201ENST00000013034 GLRA4Q5JXX5 417 aa12.27□□□□□ -0.45
NME1-201ENST00000013034 PRSS36Q5K4E3 855 aa12.27□□□□□ -0.45
NME1-201ENST00000013034 TANGO2Q6ICL3 276 aa12.27□□□□□ -0.45
NME1-201ENST00000013034 CELF5Q8N6W0 485 aaKnown RBP12.27□□□□□ -0.45
NME1-201ENST00000013034 NECAB1Q8N987 351 aa12.27□□□□□ -0.45
NME1-201ENST00000013034 ZNF461Q8TAF7 563 aa12.27□□□□□ -0.45
NME1-201ENST00000013034 DEPTORQ8TB45 409 aa12.27□□□□□ -0.45
NME1-201ENST00000013034 DEPDC1BQ8WUY9 529 aa12.27□□□□□ -0.45
NME1-201ENST00000013034 BSNDQ8WZ55 320 aa12.27□□□□□ -0.45
NME1-201ENST00000013034 IRF7Q92985 503 aa12.27□□□□□ -0.45
NME1-201ENST00000013034 CXCL16Q9H2A7 254 aa12.27□□□□□ -0.45
NME1-201ENST00000013034 ZFP14Q9HCL3 533 aa12.27□□□□□ -0.45
NME1-201ENST00000013034 ORC3Q9UBD5 711 aaPredicted RBP12.27□□□□□ -0.45
NME1-201ENST00000013034 CFAP45Q9UL16 551 aa12.27□□□□□ -0.45
NME1-201ENST00000013034 GDAQ9Y2T3 454 aa12.27□□□□□ -0.45
NME1-201ENST00000013034 COL4A2P08572 1712 aa12.27□□□□□ -0.45
NME1-201ENST00000013034 ZFHX4Q86UP3 3567 aa12.26□□□□□ -0.45
NME1-201ENST00000013034 WDR27A2RRH5 827 aa12.26□□□□□ -0.45
NME1-201ENST00000013034 DCDC2BA2VCK2 349 aa12.26□□□□□ -0.45
NME1-201ENST00000013034 VPS37CA5D8V6 355 aaPredicted RBP12.26□□□□□ -0.45
NME1-201ENST00000013034 H3BQV1 296 aa12.26□□□□□ -0.45
NME1-201ENST00000013034 SLC30A4O14863 429 aa12.26□□□□□ -0.45
NME1-201ENST00000013034 ABLIM3O94929 683 aa12.26□□□□□ -0.45
NME1-201ENST00000013034 EDN1P05305 212 aa12.26□□□□□ -0.45
NME1-201ENST00000013034 RETP07949 1114 aa12.26□□□□□ -0.45
NME1-201ENST00000013034 SPATA31C1P0DKV0 1188 aa12.26□□□□□ -0.45
NME1-201ENST00000013034 ATF2P15336 505 aa12.26□□□□□ -0.45
NME1-201ENST00000013034 EFNA5P52803 228 aa12.26□□□□□ -0.45
NME1-201ENST00000013034 GRM2Q14416 872 aa12.26□□□□□ -0.45
NME1-201ENST00000013034 EEF1DP3Q658K8 133 aa12.26□□□□□ -0.45
NME1-201ENST00000013034 PDZD4Q76G19 769 aaPredicted RBP12.26□□□□□ -0.45
NME1-201ENST00000013034 TCEAL8Q8IYN2 117 aa12.26□□□□□ -0.45
NME1-201ENST00000013034 C3orf58Q8NDZ4 430 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms