RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 NOD1Q9Y239 953 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 RASA4BC9J798 803 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 FOXP2O15409 715 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 RASA4O43374 803 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 INHBAP08476 426 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 BYSLQ13895 437 aaKnown RBP12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 NXNQ6DKJ4 435 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 ICA1LQ8NDH6 482 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 CCDC138Q96M89 665 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 CALN1Q9BXU9 219 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 TRIM55Q9BYV6 548 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 TBC1D22BQ9NU19 505 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 AKAP11Q9UKA4 1901 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 WDR64B1ANS9 1081 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 CFLARO15519 480 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 RPS6KA5O75582 802 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 STK10O94804 968 aaKnown RBP12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 ATP4AP20648 1035 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 VHLP40337 213 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 OCA2Q04671 838 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 PASD1Q8IV76 773 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 C11orf70Q9BRQ4 267 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 FAM213AQ9BRX8 229 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 CELF4Q9BZC1 486 aaKnown RBP12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 MAD1L1Q9Y6D9 718 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 PFASO15067 1338 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 YDJCA8MPS7 323 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 SLC16A3O15427 465 aaKnown RBP12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 CACNA2D1P54289 1103 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 COPS2P61201 443 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 GRIK5Q16478 980 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 KIAA1755Q5JYT7 1200 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 RAPGEF5Q92565 580 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 ITFG2Q969R8 447 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 RAVER2Q9HCJ3 691 aaKnown RBP12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 TUFT1Q9NNX1 390 aa12.83□□□□□ -0.36
TSPAN9-201ENST00000011898 CYP26A1O43174 497 aa12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 ATP6V1G1O75348 118 aa12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 MCF2P10911 925 aa12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 ANXA13P27216 316 aa12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 NOP14P78316 857 aaKnown RBP12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 DHX34Q14147 1143 aaKnown RBP12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 GEN1Q17RS7 908 aa12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 GJB7Q6PEY0 223 aa12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 C1orf54Q8WWF1 131 aa12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 MTMR8Q96EF0 704 aa12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 WARS2Q9UGM6 360 aaKnown RBP12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 A0A1B0GUL6 1792 aa12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 RFX1P22670 979 aa12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 PGM1P36871 562 aa12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 BASP1P80723 227 aaKnown RBP12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 BZW1Q7L1Q6 419 aaKnown RBP12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 LDHDQ86WU2 507 aa12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 PACSIN1Q9BY11 444 aa12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 MYH7P12883 1935 aa12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 OSTNP61366 133 aa12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 BBS9Q3SYG4 887 aa12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 GADL1Q6ZQY3 521 aa12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 NCAPG2Q86XI2 1143 aa12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 LRRC34Q8IZ02 419 aa12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 RNF25Q96BH1 459 aaPredicted RBP12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 TRAIPQ9BWF2 469 aa12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 WNT8AQ9H1J5 351 aa12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 PRR12Q9ULL5 1215 aa12.82□□□□□ -0.36
TSPAN9-201ENST00000011898 WNT7AO00755 349 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 OPLAHO14841 1288 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 UBOX5O94941 541 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 PSAPP07602 524 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 ACADSP16219 412 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 GMPSP49915 693 aaPredicted RBP12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 MIS18BP1Q6P0N0 1132 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 TMEM270Q6UE05 265 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 RFX6Q8HWS3 928 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 MCPH1Q8NEM0 835 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 HDAC7Q8WUI4 952 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 KAT2BQ92831 832 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 ASCC2Q9H1I8 757 aaPredicted RBP12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 ISCUQ9H1K1 167 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 CNGB3Q9NQW8 809 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 MED24O75448 989 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 CCDC15Q0P6D6 951 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 EEPD1Q7L9B9 569 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 ZBTB33Q86T24 672 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 SESTD1Q86VW0 696 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 FBXL13Q8NEE6 735 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 MSTO1Q9BUK6 570 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 RIOX1Q9H6W3 641 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 SAYSD1Q9NPB0 183 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 HESX1Q9UBX0 185 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 TTC7AQ9ULT0 858 aaPredicted RBP12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 ATP11BQ9Y2G3 1177 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 FGFR4P22455 802 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 CCND2P30279 289 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 JAK3P52333 1124 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 SPATA20Q8TB22 786 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 DACT3Q96B18 629 aaPredicted RBP12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 ZNF229Q9UJW7 825 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 ALG6Q9Y672 507 aa12.81□□□□□ -0.36
TSPAN9-201ENST00000011898 RSPH10B2B2RC85 870 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms