RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Adgrg2Q8CJ12 1009 aa22.68■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 YarsQ91WQ3 528 aaKnown RBP22.68■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Arfgap2Q99K28 520 aa22.68■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Fam133bQ9CVI2 245 aaKnown RBP22.68■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Trpm5Q9JJH7 1158 aa22.68■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Gm4846B2RWH8 538 aa22.67■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Pate3B3GLJ3 98 aa22.67■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Ttc17E9PVB5 1198 aa22.67■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Cdk14O35495 469 aa22.67■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Gucy1b3O54865 620 aa22.67■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Xirp1O70373 1129 aa22.67■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 MmeQ61391 750 aa22.67■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Wdr3Q8BHB4 942 aaKnown RBP22.67■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Cnksr3Q8BMA3 555 aa22.67■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Vps18Q8R307 973 aa22.67■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 VillQ91YD6 859 aa22.67■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Grpel1Q99LP6 217 aa22.67■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Micu3Q9CTY5 523 aa22.67■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 PollQ9QXE2 573 aaKnown RBP22.67■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Slc26a3Q9WVC8 757 aa22.67■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Cntnap3E9PY62 1287 aa22.66■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Lrrc4bP0C192 709 aa22.66■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Acvr2bP27040 536 aa22.66■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 CybbQ61093 570 aa22.66■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Cyp3a16Q64481 504 aa22.66■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Fhod1Q6P9Q4 1197 aa22.66■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Mrgprb8Q7TN51 330 aa22.66■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Tmem260Q8BMD6 703 aa22.66■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Rftn2Q8CHX7 500 aa22.66■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Il17cQ8K4C5 194 aa22.66■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Csde1Q91W50 798 aaKnown RBP22.66■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Fam76aQ922G2 307 aa22.66■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 EpgnQ924X1 152 aa22.66■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Map4k3Q99JP0 894 aa22.66■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 EmcnQ9R0H2 261 aa22.66■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Gm45140A0A0N4SUM8 220 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Gm3252E9PUT9 216 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Vmn2r17E9PYF5 849 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Gm3468E9QAJ8 216 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Xrcc5P27641 732 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Tulp2P46686 562 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Kcnq1P97414 668 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Gse1Q3U3C9 1213 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Zfp251Q6PCX8 632 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Tlr11Q6R5P0 926 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Tubb2aQ7TMM9 445 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Slc7a14Q8BXR1 771 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 NcaphQ8C156 731 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Tubb2bQ9CWF2 445 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Creld2Q9CYA0 350 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Kcnd2Q9Z0V2 630 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Arih2Q9Z1K6 492 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Atp2c2A7L9Z8 944 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Gm12800B1AUV4 484 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Gm12794L7MTS5 483 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 FechP22315 420 aaKnown RBP22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 HmmrQ00547 794 aaKnown RBP22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Esyt3Q5DTI8 891 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 RetsatQ64FW2 609 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Phf24Q80TL4 400 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Snip1Q8BIZ6 383 aaKnown RBP22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Phc3Q8CHP6 981 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 CarfQ8VHI4 689 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Ctnnbl1Q9CWL8 563 aaKnown RBP22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Spata17Q9D552 379 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Syngap1F6SEU4 1340 aa22.65■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Dpy19l4A2AJQ3 722 aa22.64■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Gm4297D3YWB7 211 aa22.64■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Serpinh1P19324 417 aaKnown RBP22.64■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Tbxas1P36423 533 aa22.64■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Tcp11Q01755 566 aa22.64■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Rmdn3Q3UJU9 470 aa22.64■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Kiaa1328Q6NZK5 612 aa22.64■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Cdc23Q8BGZ4 597 aa22.64■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 IscuQ9D7P6 168 aa22.64■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Btbd18A0A0A6YY25 723 aa22.63■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Igkv10-96A0A140T8M1 115 aa22.63■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Spata31d1dE9Q5W2 1247 aa22.63■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Snx12O70493 165 aa22.63■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Ass1P16460 412 aa22.63■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Mgat1P27808 447 aa22.63■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Tatdn3Q3U1C6 294 aa22.63■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Fam92bQ3V2J0 292 aa22.63■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Krt35Q497I4 455 aa22.63■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Snd1Q78PY7 910 aaKnown RBP22.63■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Crybg3Q80W49 1005 aa22.63■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Polr2bQ8CFI7 1174 aaKnown RBP22.63■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Rnf14Q9JI90 485 aa22.63■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Vmn2r121A2BE32 847 aa22.62■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Tatdn2B7ZNL9 783 aaKnown RBP22.62■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Card6E9PWH2 1175 aa22.62■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Zfp882E9Q4R4 555 aa22.62■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Trap1aP19473 224 aa22.62■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Ppm1aP49443 382 aa22.62■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 YwhaeP62259 255 aaKnown RBP22.62■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Rad54lP70270 747 aa22.62■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Col19a1Q0VF58 1136 aa22.62■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Ccdc33Q3ULW6 985 aa22.62■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Cep112Q5PR68 954 aa22.62■■□□□ 1.21
Ccdc88a-202ENSMUST00000109477 Papd7Q6PB75 542 aa22.62■■□□□ 1.21
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms