RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Cst12Q9DAN8 128 aa9.44□□□□□ -0.9
Clcn3-202ENSMUST00000056508 TpteG5E8H5 664 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gm8857L7N291 182 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Mc3rP33033 323 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Akr1b8P45377 316 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Cul4aQ3TCH7 759 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 RubcnlQ3TD16 648 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Lsg1Q3UM18 644 aaKnown RBP9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Slc44a5Q5RJI2 710 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Grik1Q60934 836 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Vsx2Q61412 361 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gucy2gQ6TL19 1100 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Zmym6Q8BS54 1249 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Klhl11Q8CE33 709 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Exosc5Q9CRA8 235 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Adam25Q9R159 760 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ylpm1Q9R0I7 1386 aaKnown RBP9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Akap1O08715 857 aaKnown RBP9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Hmox2O70252 315 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Slc2a4P14142 509 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Zfp781Q0P5U5 243 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Tmtc1Q3UV71 942 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 ItgaeQ60677 1167 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Tmem106cQ80VP8 260 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Krt75Q8BGZ7 551 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gstt3Q99L20 241 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Fbxo32Q9CPU7 355 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Bbs2Q9CWF6 721 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Dcun1d5Q9CXV9 237 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gpatch1Q9DBM1 930 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gm42688A0A0R3P9D1 673 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Tp53P02340 387 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Fbxo40P62932 710 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gdpd4Q3TT99 632 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gm45902Q3UDN3 361 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Fam81aQ3UXZ6 364 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ppp4r3cQ3V0Y1 813 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Tmem232Q5K6N0 675 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Slc20a1Q61609 681 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 BC061237Q6P8I2 184 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Eif2s1Q6ZWX6 315 aaKnown RBP9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 OsgepQ8BWU5 335 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Fem1cQ8CEF1 617 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ppp1r8Q8R3G1 351 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Rprd1aQ8VDS4 312 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Mageb16Q9CWV4 363 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Swt1Q9DBQ9 907 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Nudt12Q9DCN1 462 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Trim43cP86449 446 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Patl1Q3TC46 770 aaKnown RBP9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Tespa1Q3U132 458 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ccdc185Q3V118 621 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ifit2Q64112 472 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Pcdhb14Q6PB90 796 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ints2Q80UK8 1198 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Znf473Q8BI67 892 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 PdhxQ8BKZ9 501 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Znf451Q8C0P7 1056 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Amigo3Q8C2S7 508 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Fbxo45Q8K3B1 286 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Cyp4f16Q99N17 524 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Mzt2Q9CQ25 159 aa9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Noc2lQ9WV70 747 aaKnown RBP9.43□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Abcb5B5X0E4 1255 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 ErmardE9Q048 622 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gm4841E9QAA8 417 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Cacna2d1O08532 1103 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Folh1O35409 752 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Esx1O88933 382 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 PamP97467 979 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Scg2Q03517 617 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ankrd42Q3V096 527 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Camsap3Q80VC9 1252 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Dennd2aQ8C4S8 1000 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Acsf2Q8VCW8 615 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Mthfd1Q922D8 935 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Sesn3Q9CYP7 492 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ccdc124Q9D8X2 217 aaKnown RBP9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Tulp2P46686 562 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Armc5Q5EBP3 926 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Zscan26Q5RJ54 466 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Shroom1Q5SX79 823 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 PstkQ8BP74 359 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Clasp2Q8BRT1 1286 aaKnown RBP9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Anapc2Q8BZQ7 837 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Vps9d1Q8C190 649 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Teddm1bQ8CC62 306 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Commd1Q8K4M5 188 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Tmem161aQ8VCA6 480 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 HpgdQ8VCC1 269 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Lrrc2Q8VDB8 371 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 ZgpatQ8VDM1 511 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 MlphQ91V27 590 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Cdca5Q9CPY3 264 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Stau1Q9Z108 487 aaKnown RBP9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Fdx1P46656 188 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Btg3P50615 252 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Rnf44Q3UHJ8 407 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Lsmem1Q3UQS2 128 aa9.42□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Stxbp3Q60770 592 aa9.42□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms