RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Ggt5Q9Z2A9 573 aa13.54□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Gm4846B2RWH8 538 aa13.53□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Gm44503E9PYU5 387 aa13.53□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Ercc5P35689 1170 aa13.53□□□□□ -0.24
Rnf4-201ENSMUST00000030992 TwistnbQ78WZ7 330 aaKnown RBP13.53□□□□□ -0.24
Rnf4-201ENSMUST00000030992 L3mbtl3Q8BLB7 883 aa13.53□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Hectd2Q8CDU6 774 aa13.53□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Xpo6Q924Z6 1125 aa13.53□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Drp2Q05AA6 957 aa13.53□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Igsf9Q05BQ1 1179 aa13.53□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Ece1Q4PZA2 769 aa13.53□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Gm4952Q5FW57 296 aa13.53□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Inpp4bQ6P1Y8 924 aa13.53□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Ankfy1Q810B6 1169 aa13.53□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Hsdl1Q8BTX9 330 aa13.53□□□□□ -0.24
Rnf4-201ENSMUST00000030992 McmbpQ8R3C0 642 aa13.53□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Tti1Q91V83 1085 aa13.53□□□□□ -0.24
Rnf4-201ENSMUST00000030992 KynuQ9CXF0 464 aa13.53□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Cep72Q9D3R3 646 aa13.53□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Nudt5Q9JKX6 218 aa13.53□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Ecel1Q9JMI0 775 aa13.53□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Patl2A2ARM1 529 aa13.52□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Il2rbP16297 539 aa13.52□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Mov10P23249 1004 aaKnown RBP13.52□□□□□ -0.24
Rnf4-201ENSMUST00000030992 LeprP48356 1162 aa13.52□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Irf3P70671 419 aa13.52□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Fam107bQ3TGF2 131 aa13.52□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Fam214aQ69ZK7 1075 aa13.52□□□□□ -0.24
Rnf4-201ENSMUST00000030992 FAM120AQ6A0A9 1112 aaKnown RBP13.52□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Rsad2Q8CBB9 362 aa13.52□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Gtpbp10Q8K013 366 aa13.52□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Xpo5Q924C1 1204 aaKnown RBP13.52□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Q9D2Q3 444 aa13.52□□□□□ -0.24
Rnf4-201ENSMUST00000030992 Atad5Q4QY64 1826 aa13.52□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Casq2O09161 415 aa13.52□□□□□ -0.25
Rnf4-201ENSMUST00000030992 MafP54843 370 aa13.52□□□□□ -0.25
Rnf4-201ENSMUST00000030992 CiitaP79621 1155 aa13.52□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Zc3h15Q3TIV5 426 aaKnown RBP13.52□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Trim21Q62191 470 aa13.52□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Rell1Q8K2J7 272 aa13.52□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Lrrc42Q8R2U7 421 aa13.52□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Ddx39aQ8VDW0 427 aaKnown RBP13.52□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Socs4Q91ZA6 436 aa13.52□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Lztr1Q9CQ33 837 aa13.52□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Klc4Q9DBS5 619 aa13.52□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Smok2bQ9QYZ3 484 aa13.52□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Smok2aQ9QYZ6 504 aa13.52□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Gpr161B2RPY5 545 aa13.51□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Marcksl1P28667 200 aa13.51□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Kif5cP28738 956 aaKnown RBP13.51□□□□□ -0.25
Rnf4-201ENSMUST00000030992 RalaP63321 206 aa13.51□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Grm1P97772 1199 aa13.51□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Scaf8Q6DID3 1268 aa13.51□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Rhot1Q8BG51 631 aa13.51□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Btbd9Q8C726 612 aa13.51□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Ablim1Q8K4G5 861 aa13.51□□□□□ -0.25
Rnf4-201ENSMUST00000030992 ItpkaQ8R071 459 aa13.51□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Gm10801F7C7Q0 168 aa13.51□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Lrch1P62046 709 aa13.51□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Arl14Q3SXC5 192 aa13.51□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Gm3414Q3TNU4 584 aa13.51□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Tmem63bQ3TWI9 832 aa13.51□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Zbtb17Q60821 794 aa13.51□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Soat1Q61263 540 aa13.51□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Uts2bQ765I1 113 aa13.51□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Elac2Q80Y81 831 aaKnown RBP13.51□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Pcdha9Q91Y11 979 aa13.51□□□□□ -0.25
Rnf4-201ENSMUST00000030992 CtsfQ9R013 462 aa13.51□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Plod3Q9R0E1 741 aa13.51□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Gm13084A2A8N0 494 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Lta4hP24527 611 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 PdgfraP26618 1089 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Eef1dP57776 281 aaKnown RBP13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Thrap3Q569Z6 951 aaKnown RBP13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Klra7Q60654 280 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Ccser1Q8C0C4 895 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Ttc8Q8VD72 515 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Znf704Q9ERQ3 566 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Ddx20Q9JJY4 825 aaKnown RBP13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Pdzd4Q9QY39 772 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Krt71Q9R0H5 524 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Rfx8D3YU81 596 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Srsf11E9Q6E5 511 aaKnown RBP13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Xbp1O35426 267 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 RenbpP82343 430 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Atp11aP98197 1187 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Ddr2Q62371 854 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Zswim6Q80TB7 1207 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Tmem120aQ8C1E7 343 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Prpf31Q8CCF0 499 aaKnown RBP13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 ClasrpQ8CFC7 668 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Rfx5Q9JL61 658 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Znf394Q9Z1D9 521 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Gys1Q9Z1E4 738 aaKnown RBP13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Gm1661E9Q963 441 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Tdpoz2Q717B2 364 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Cplx4Q80WM3 160 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Pak4Q8BTW9 593 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Lca5lQ8C0X0 741 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Rdh14Q9ERI6 334 aa13.5□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms