RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 PRAG1Q571I4 1179 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Bfsp2Q6NVD9 416 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Cpa1Q7TPZ8 419 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Btbd10Q80X66 475 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Gcfc2Q8BKT3 769 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Rpn1Q91YQ5 608 aaKnown RBP10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Chit1Q9D7Q1 464 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Rbp7Q9EPC5 134 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Xpo7Q9EPK7 1087 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Bcl10Q9Z0H7 233 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Morc3F7BJB9 942 aaKnown RBP10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ccng1P51945 294 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Ephb2P54763 986 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 McamQ8R2Y2 648 aaKnown RBP10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Msi2Q920Q6 346 aaKnown RBP10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Osbpl7A2A716 963 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Farp1F8VPU2 1048 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Srp72F8VQC1 671 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Orm2P07361 207 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Olfm4Q3UZZ4 505 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Rgs10Q9CQE5 181 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Cib4Q9D9N5 185 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Pi16Q9ET66 489 aa10.65□□□□□ -0.7
Ubr1-201ENSMUST00000028728 Gm3371F7CQW8 167 aa10.65□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Stmn3O70166 180 aa10.65□□□□□ -0.71
Ubr1-201ENSMUST00000028728 CblP22682 913 aa10.65□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Mtmr10Q7TPM9 771 aa10.65□□□□□ -0.71
Ubr1-201ENSMUST00000028728 KhnynQ80U38 671 aa10.65□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Rassf9Q8K342 435 aa10.65□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Dctn2Q99KJ8 402 aa10.65□□□□□ -0.71
Ubr1-201ENSMUST00000028728 RnmtQ9D0L8 465 aaKnown RBP10.65□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gm3402K7N5P2 326 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Folh1O35409 752 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pik3r1P26450 724 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Tmem165P52875 323 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 RasefQ5RI75 627 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Kbtbd4Q8R179 534 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ppp1r14cQ8R4S0 164 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gm13023A2A8N2 498 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Lonrf1D3YY23 762 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gimd1E9PW74 217 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gm10639E9Q6L7 222 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Men1O88559 611 aaKnown RBP10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gsta2P10648 222 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Msh2P43247 935 aaKnown RBP10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Scnn1aQ61180 699 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ubxn7Q6P5G6 467 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ttc16Q8C1F5 767 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Znf426Q8R1D1 550 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Atxn10P28658 475 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Clec4fP70194 548 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Plekha7Q3UIL6 1118 aaKnown RBP10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Slc7a14Q8BXR1 771 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Lrrc59Q922Q8 307 aaKnown RBP10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 CdylQ9WTK2 593 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ppp1r37Q8BKR5 712 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pole3Q9JKP7 145 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 H2afyQ9QZQ8 372 aaKnown RBP10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Adamts13Q769J6 1426 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Yy1Q00899 414 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Tnni3kQ5GIG6 834 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 DcstampQ7TNJ0 470 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Rbm12b1Q80YR9 836 aaKnown RBP10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Rhpn2Q8BWR8 686 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Slc12a8Q8VI23 705 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Dmap1Q9JI44 468 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Cdkl2Q9QUK0 568 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Olfr247E9PVJ7 320 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gm5134E9QAB5 671 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pagr1bF6V0H0 108 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Nccrp1G3X9C2 266 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Olfr819K7N727 320 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Foxd4Q60688 444 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 CapslQ6P8Y1 208 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pglyrp2Q8VCS0 530 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pagr1aQ99L02 253 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Nmd3Q99L48 503 aaKnown RBP10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Sucla2Q9Z2I9 463 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Rims2Q9EQZ7 1530 aa10.64□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Pdk4O70571 412 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 BC051142Q3V0M8 400 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ppp4r3cQ3V0Y1 813 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Mks1Q5SW45 561 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Vmn2r43Q80Z08 845 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Slc35g1Q8BY79 368 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Abcf3Q8K268 709 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 PfasQ5SUR0 1337 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Gm43518A0A0G2JGB6 165 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Nfatc2ipO09130 412 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Nmt2O70311 529 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Sh3gl2Q62420 352 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 BegainQ68EF6 600 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ssxb10Q6XAR7 170 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 PrcpQ7TMR0 491 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Slitrk3Q810B9 980 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ddx56Q9D0R4 546 aaKnown RBP10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ppp3ccP48455 513 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Ccdc127Q3TC33 260 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Parp6Q6P6P7 630 aa10.63□□□□□ -0.71
Ubr1-201ENSMUST00000028728 Znf467Q8JZL0 594 aa10.63□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms