RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Usp53P15975 1069 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Myl2P51667 166 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Serping1P97290 504 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Kdm7aQ3UWM4 940 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Fam228bQ497Q6 232 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Olfr121Q5CZY0 321 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Il17raQ60943 864 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Dync1li2Q6PDL0 492 aaKnown RBP9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Lrrn2Q6PHP6 730 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gm7247Q6UY52 187 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Kcnk18Q6VV64 394 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Dnajc6Q80TZ3 938 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Fam49aQ8BHZ0 323 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Mta1Q8K4B0 715 aaKnown RBP9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Chn1Q91V57 459 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Pcdha11Q91Y19 950 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Twf1Q91YR1 350 aaKnown RBP9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Srgap2Q91Z67 1071 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Polr3fQ921X6 316 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 CdylQ9WTK2 593 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Phf2Q9WTU0 1096 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 TnnQ80Z71 1560 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Arhgap23Q69ZH9 1483 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gm29554A0A087WNW4 188 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Naaladl2A0A0N4SUJ3 795 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Skint6A7XUZ6 1240 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ccng2O08918 344 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Vsnl1P62761 191 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Trim43bP86448 445 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Atp11aP98197 1187 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Cab39Q06138 341 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Oas1fQ14AZ4 364 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Phactr1Q2M3X8 580 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Szrd1Q6NXN1 152 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Vmn2r43Q80Z08 845 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ppp1r37Q8BKR5 712 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Sapcd2Q9D818 391 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Olfr711Q9EPG2 314 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Tubb1A2AQ07 451 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Tcp10bE9PYJ0 438 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Tcp10cE9Q046 482 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Cyp4f17G3UW78 524 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Guca1aP43081 202 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 CcnjlQ5SRT8 387 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Casc4Q6P2L7 435 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Nckap1lQ8K1X4 1134 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Fcho1Q8K285 873 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 OafQ8QZR4 282 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Tc2nQ91XT6 489 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Cyp4f16Q99N17 524 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 XpotQ9CRT8 963 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Kansl3A2RSY1 903 aaKnown RBP9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Sec31aQ3UPL0 1230 aaKnown RBP9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Arl13bQ640N2 427 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 NcaphQ8C156 731 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Rab14Q91V41 215 aaKnown RBP9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 NptxrQ99J85 493 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Ino80bQ99PT3 375 aaKnown RBP9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Micu3Q9CTY5 523 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 CenpsQ9D084 142 aa9.6□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Olfr1123A2AT85 323 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Serpinb3cA2RSF9 386 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Itga9B8JK39 1036 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gcnt4E9Q649 455 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 L1camP11627 1260 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Elac2Q80Y81 831 aaKnown RBP9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 RbakQ8BQC8 711 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Pnma1Q8C1C8 353 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Pphln1Q8K2H1 381 aaKnown RBP9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Pi16Q9ET66 489 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 PigoQ9JJI6 1093 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gmeb1Q9JL60 562 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Trip4Q9QXN3 581 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Uhrf1bp1B2KF50 1429 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Dnajb6O54946 365 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Akap10O88845 662 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Kcna3P16390 528 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 C2P21180 760 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Rab17P35292 214 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Rpl36P47964 105 aaKnown RBP9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 SpoplQ2M2N2 392 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Eepd1Q3TGW2 569 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Wdr41Q3UDP0 460 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 CtcfQ61164 736 aaKnown RBP9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Tdrd7Q8K1H1 1086 aaKnown RBP9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Aipl1Q924K1 328 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Hormad1Q9D5T7 392 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Tmx2Q9D710 295 aaKnown RBP9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 DcpsQ9DAR7 338 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Map3k4O08648 1597 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 CrymO54983 313 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 RaraP11416 462 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 ThraP63058 492 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Pou6f1Q07916 301 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Fastkd1Q6DI86 829 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Gemin4Q6P6L6 1058 aaKnown RBP9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 HltfQ6PCN7 1003 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Arhgap26Q6ZQ82 814 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Actl9Q8CG27 415 aa9.59□□□□□ -0.87
Ccdc47-201ENSMUST00000002043 Cdk17Q8K0D0 523 aa9.59□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms