RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W ATG12P38316 186 aa1.23□□□□□ -2.21
MSH5YDL154W BIG1P38813 335 aa1.23□□□□□ -2.21
MSH5YDL154W ALB1P47019 175 aaPredicted RBP1.23□□□□□ -2.21
MSH5YDL154W SNX4P47057 423 aa1.23□□□□□ -2.21
MSH5YDL154W IBA57P47158 497 aa1.23□□□□□ -2.21
MSH5YDL154W EBS1Q03466 884 aaKnown RBP1.23□□□□□ -2.21
MSH5YDL154W SLD7Q08457 257 aa1.23□□□□□ -2.21
MSH5YDL154W YPL119C-AQ3E751 87 aa1.23□□□□□ -2.21
MSH5YDL154W BEM2P39960 2167 aaKnown RBP1.22□□□□□ -2.21
MSH5YDL154W RRT12P25381 491 aa1.22□□□□□ -2.21
MSH5YDL154W YCR016WP25617 290 aaKnown RBP1.22□□□□□ -2.21
MSH5YDL154W YBL081WP38180 368 aaKnown RBP1.22□□□□□ -2.21
MSH5YDL154W GIM4P40005 111 aaKnown RBP1.22□□□□□ -2.21
MSH5YDL154W SYS1P41544 203 aa1.22□□□□□ -2.21
MSH5YDL154W NBP1P52919 319 aaPredicted RBP1.22□□□□□ -2.21
MSH5YDL154W RHO3Q00245 231 aaKnown RBP1.22□□□□□ -2.21
MSH5YDL154W ATG17Q06410 417 aa1.22□□□□□ -2.21
MSH5YDL154W YDL144CQ07589 356 aa1.22□□□□□ -2.21
MSH5YDL154W PRM7Q12459 698 aa1.22□□□□□ -2.21
MSH5YDL154W YAL063C-AQ3E791 96 aa1.22□□□□□ -2.21
MSH5YDL154W COX2P00410 251 aa1.22□□□□□ -2.21
MSH5YDL154W POL30P15873 258 aaKnown RBP1.22□□□□□ -2.21
MSH5YDL154W CDC42P19073 191 aa1.22□□□□□ -2.21
MSH5YDL154W CWP1P28319 239 aa1.22□□□□□ -2.21
MSH5YDL154W TKL2P33315 681 aa1.22□□□□□ -2.21
MSH5YDL154W BMH2P34730 273 aaKnown RBP1.22□□□□□ -2.21
MSH5YDL154W MED8P38304 223 aa1.22□□□□□ -2.21
MSH5YDL154W PRS2P38620 318 aaKnown RBP1.22□□□□□ -2.21
MSH5YDL154W YHI9P38765 294 aa1.22□□□□□ -2.21
MSH5YDL154W SOK1P40317 901 aa1.22□□□□□ -2.21
MSH5YDL154W FMC1P40491 155 aa1.22□□□□□ -2.21
MSH5YDL154W CIN5P40917 295 aa1.22□□□□□ -2.21
MSH5YDL154W NIF3P53081 288 aa1.22□□□□□ -2.21
MSH5YDL154W ZRG17P53735 605 aa1.22□□□□□ -2.21
MSH5YDL154W ALG9P53868 555 aaKnown RBP1.22□□□□□ -2.21
MSH5YDL154W FMP41P53889 259 aaKnown RBP1.22□□□□□ -2.21
MSH5YDL154W PET117Q02771 107 aa1.22□□□□□ -2.21
MSH5YDL154W YPR147CQ06522 304 aaKnown RBP1.22□□□□□ -2.21
MSH5YDL154W YPR195CQ06594 109 aa1.22□□□□□ -2.21
MSH5YDL154W RRS1Q08746 203 aaKnown RBP1.22□□□□□ -2.21
MSH5YDL154W YOR029WQ12243 111 aa1.22□□□□□ -2.21
MSH5YDL154W SME1Q12330 94 aaPredicted RBP1.22□□□□□ -2.21
MSH5YDL154W PST1Q12355 444 aa1.22□□□□□ -2.21
MSH5YDL154W SNU23Q12368 194 aaPredicted RBP1.22□□□□□ -2.21
MSH5YDL154W MRX4Q12467 430 aa1.22□□□□□ -2.21
MSH5YDL154W LSO2Q3E772 92 aaKnown RBP1.22□□□□□ -2.21
MSH5YDL154W AI5_BETAQ9ZZX0 354 aa1.22□□□□□ -2.21
MSH5YDL154W SRL3P36167 246 aa1.21□□□□□ -2.22
MSH5YDL154W MAK5P38112 773 aaPredicted RBP1.21□□□□□ -2.22
MSH5YDL154W SSH1P38353 490 aaKnown RBP1.21□□□□□ -2.22
MSH5YDL154W DED81P38707 554 aaKnown RBP1.21□□□□□ -2.22
MSH5YDL154W NPT1P39683 429 aaKnown RBP1.21□□□□□ -2.22
MSH5YDL154W PHB1P40961 287 aa1.21□□□□□ -2.22
MSH5YDL154W MIG2P53035 382 aa1.21□□□□□ -2.22
MSH5YDL154W MAL13P53338 473 aa1.21□□□□□ -2.22
MSH5YDL154W AKR2Q12013 749 aa1.21□□□□□ -2.22
MSH5YDL154W YPR063CQ12160 140 aa1.21□□□□□ -2.22
MSH5YDL154W YDL012CQ12489 107 aa1.21□□□□□ -2.22
MSH5YDL154W YOL163WP0CF20 169 aa1.21□□□□□ -2.22
MSH5YDL154W MATALPHA2P0CY08 210 aa1.21□□□□□ -2.22
MSH5YDL154W HMLALPHA2P0CY09 210 aa1.21□□□□□ -2.22
MSH5YDL154W RPL4AP10664 362 aaKnown RBP1.21□□□□□ -2.22
MSH5YDL154W POX1P13711 748 aa1.21□□□□□ -2.22
MSH5YDL154W PRE7P23724 241 aaKnown RBP1.21□□□□□ -2.22
MSH5YDL154W HSP30P25619 332 aa1.21□□□□□ -2.22
MSH5YDL154W QRI5P32344 111 aa1.21□□□□□ -2.22
MSH5YDL154W ARO4P32449 370 aaKnown RBP1.21□□□□□ -2.22
MSH5YDL154W ARC19P33204 171 aaKnown RBP1.21□□□□□ -2.22
MSH5YDL154W UTP11P34247 250 aaPredicted RBP1.21□□□□□ -2.22
MSH5YDL154W MRPL39P36533 70 aa1.21□□□□□ -2.22
MSH5YDL154W FZO1P38297 855 aa1.21□□□□□ -2.22
MSH5YDL154W MTW1P39731 289 aa1.21□□□□□ -2.22
MSH5YDL154W PFS2P42841 465 aaKnown RBP1.21□□□□□ -2.22
MSH5YDL154W RPL4BP49626 362 aaKnown RBP1.21□□□□□ -2.22
MSH5YDL154W USE1P53146 245 aa1.21□□□□□ -2.22
MSH5YDL154W TVP15Q03860 143 aa1.21□□□□□ -2.22
MSH5YDL154W DXO1Q06349 442 aa1.21□□□□□ -2.22
MSH5YDL154W PAM18Q07914 168 aa1.21□□□□□ -2.22
MSH5YDL154W YIL046W-AQ3E7Z4 54 aa1.21□□□□□ -2.22
MSH5YDL154W BMH1P29311 267 aaKnown RBP1.2□□□□□ -2.22
MSH5YDL154W PRS4P38063 326 aaPredicted RBP1.2□□□□□ -2.22
MSH5YDL154W RTC3P38804 111 aaPredicted RBP1.2□□□□□ -2.22
MSH5YDL154W ECM14P38836 430 aa1.2□□□□□ -2.22
MSH5YDL154W YER034WP40022 185 aaKnown RBP1.2□□□□□ -2.22
MSH5YDL154W DSN1P40568 576 aa1.2□□□□□ -2.22
MSH5YDL154W UFD1P53044 361 aa1.2□□□□□ -2.22
MSH5YDL154W YNL095CP53932 642 aa1.2□□□□□ -2.22
MSH5YDL154W ACT1P60010 375 aaKnown RBP1.2□□□□□ -2.22
MSH5YDL154W OSH6Q02201 448 aa1.2□□□□□ -2.22
MSH5YDL154W SRL4Q03085 281 aa1.2□□□□□ -2.22
MSH5YDL154W PRM15Q03262 622 aa1.2□□□□□ -2.22
MSH5YDL154W GOT1Q03554 138 aa1.2□□□□□ -2.22
MSH5YDL154W SPC2Q04969 178 aa1.2□□□□□ -2.22
MSH5YDL154W FUS2Q05670 677 aa1.2□□□□□ -2.22
MSH5YDL154W YPR098CQ06089 161 aa1.2□□□□□ -2.22
MSH5YDL154W ARR2Q06597 130 aa1.2□□□□□ -2.22
MSH5YDL154W YPL264CQ08980 353 aa1.2□□□□□ -2.22
MSH5YDL154W CMC2Q3E7A4 109 aa1.2□□□□□ -2.22
MSH5YDL154W ISD11Q6Q560 94 aa1.2□□□□□ -2.22
MSH5YDL154W TRA1P38811 3744 aa1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms