RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 ACCSQ96QU6 501 aa18.89■□□□□ 0.61
PHGDH-227ENST00000641811 PCDHB13Q9Y5F0 798 aa18.89■□□□□ 0.61
PHGDH-227ENST00000641811 IRAK3Q9Y616 596 aa18.89■□□□□ 0.61
PHGDH-227ENST00000641811 ADSSP30520 456 aa18.88■□□□□ 0.61
PHGDH-227ENST00000641811 NDUFA8P51970 172 aa18.88■□□□□ 0.61
PHGDH-227ENST00000641811 ENOX2Q16206 610 aaKnown RBP18.88■□□□□ 0.61
PHGDH-227ENST00000641811 KIAA0319Q5VV43 1072 aa18.88■□□□□ 0.61
PHGDH-227ENST00000641811 TMEM87AQ8NBN3 555 aa18.88■□□□□ 0.61
PHGDH-227ENST00000641811 GOLPH3LQ9H4A5 285 aa18.88■□□□□ 0.61
PHGDH-227ENST00000641811 MRPL17Q9NRX2 175 aaKnown RBP18.88■□□□□ 0.61
PHGDH-227ENST00000641811 STK39Q9UEW8 545 aa18.88■□□□□ 0.61
PHGDH-227ENST00000641811 CD207Q9UJ71 328 aa18.88■□□□□ 0.61
PHGDH-227ENST00000641811 STYXL1Q9Y6J8 313 aa18.88■□□□□ 0.61
PHGDH-227ENST00000641811 VCANP13611 3396 aa18.87■□□□□ 0.61
PHGDH-227ENST00000641811 TTC26A0AVF1 554 aa18.87■□□□□ 0.61
PHGDH-227ENST00000641811 GRXCR2A6NFK2 248 aa18.87■□□□□ 0.61
PHGDH-227ENST00000641811 LACTBL1A8MY62 500 aa18.87■□□□□ 0.61
PHGDH-227ENST00000641811 URODP06132 367 aa18.87■□□□□ 0.61
PHGDH-227ENST00000641811 CNPP09543 421 aaKnown RBP18.87■□□□□ 0.61
PHGDH-227ENST00000641811 IL9P15248 144 aa18.87■□□□□ 0.61
PHGDH-227ENST00000641811 GLUD2P49448 558 aa18.87■□□□□ 0.61
PHGDH-227ENST00000641811 ACOT2P49753 483 aa18.87■□□□□ 0.61
PHGDH-227ENST00000641811 UPP1Q16831 310 aa18.87■□□□□ 0.61
PHGDH-227ENST00000641811 KIAA1841Q6NSI8 718 aa18.87■□□□□ 0.61
PHGDH-227ENST00000641811 CD300LGQ6UXG3 332 aa18.87■□□□□ 0.61
PHGDH-227ENST00000641811 FSIP1Q8NA03 581 aa18.87■□□□□ 0.61
PHGDH-227ENST00000641811 C3orf58Q8NDZ4 430 aa18.87■□□□□ 0.61
PHGDH-227ENST00000641811 PAGE5Q96GU1 130 aa18.87■□□□□ 0.61
PHGDH-227ENST00000641811 KLHL5Q96PQ7 755 aa18.87■□□□□ 0.61
PHGDH-227ENST00000641811 PYM1Q9BRP8 204 aaKnown RBP18.87■□□□□ 0.61
PHGDH-227ENST00000641811 CHST7Q9NS84 486 aa18.87■□□□□ 0.61
PHGDH-227ENST00000641811 CPSF3Q9UKF6 684 aaKnown RBP18.87■□□□□ 0.61
PHGDH-227ENST00000641811 HCFC2Q9Y5Z7 792 aa18.87■□□□□ 0.61
PHGDH-227ENST00000641811 CITO14578 2027 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 SF3B1O75533 1304 aaKnown RBP eCLIP18.86■□□□□ 0.613e-6■■■■■ 100.2
PHGDH-227ENST00000641811 FAM237AA0A1B0GTK4 181 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 A0A1W2PQ27 194 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 A0A1W2PQ64 194 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 A0A1W2PQD8 194 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 B3GAT3O94766 335 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 EPCAMP16422 314 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 SYKP43405 635 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 DSG1Q02413 1049 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 KYAT1Q16773 422 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 USP41Q3LFD5 358 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 FAM171A1Q5VUB5 890 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 SLFN12LQ6IEE8 588 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 DCLRE1AQ6PJP8 1040 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 UNC13DQ70J99 1090 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 SYCP3Q8IZU3 236 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 ZSWIM2Q8NEG5 633 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 RIN2Q8WYP3 895 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-227ENST00000641811 POMGNT1Q8WZA1 660 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 FAM212AQ96EL1 285 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 UROC1Q96N76 676 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 APOL5Q9BWW9 433 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 RPF1Q9H9Y2 349 aaKnown RBP18.86■□□□□ 0.61
PHGDH-227ENST00000641811 PLEKHA5Q9HAU0 1116 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 SLC38A7Q9NVC3 462 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 TUBGCP4Q9UGJ1 667 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 AGO2Q9UKV8 859 aaKnown RBP18.86■□□□□ 0.61
PHGDH-227ENST00000641811 EXOC7Q9UPT5 735 aa18.86■□□□□ 0.61
PHGDH-227ENST00000641811 I3L4J1 428 aa18.85■□□□□ 0.61
PHGDH-227ENST00000641811 PODXLO00592 558 aa18.85■□□□□ 0.61
PHGDH-227ENST00000641811 MBTPS2O43462 519 aa18.85■□□□□ 0.61
PHGDH-227ENST00000641811 KLRC2P26717 231 aa18.85■□□□□ 0.61
PHGDH-227ENST00000641811 HOXD13P35453 343 aa18.85■□□□□ 0.61
PHGDH-227ENST00000641811 BRCC3P46736 316 aa18.85■□□□□ 0.61
PHGDH-227ENST00000641811 PPP2R3AQ06190 1150 aa18.85■□□□□ 0.61
PHGDH-227ENST00000641811 EHHADHQ08426 723 aa18.85■□□□□ 0.61
PHGDH-227ENST00000641811 ALCAMQ13740 583 aa18.85■□□□□ 0.61
PHGDH-227ENST00000641811 RTP2Q5QGT7 225 aa18.85■□□□□ 0.61
PHGDH-227ENST00000641811 FAM26FQ5R3K3 315 aa18.85■□□□□ 0.61
PHGDH-227ENST00000641811 ANKRD54Q6NXT1 300 aa18.85■□□□□ 0.61
PHGDH-227ENST00000641811 PRSS55Q6UWB4 352 aaPredicted RBP18.85■□□□□ 0.61
PHGDH-227ENST00000641811 CRELD2Q6UXH1 353 aaPredicted RBP18.85■□□□□ 0.61
PHGDH-227ENST00000641811 TMEM184AQ6ZMB5 413 aa18.85■□□□□ 0.61
PHGDH-227ENST00000641811 CEP57Q86XR8 500 aa18.85■□□□□ 0.61
PHGDH-227ENST00000641811 SLC22A17Q8WUG5 538 aa18.85■□□□□ 0.61
PHGDH-227ENST00000641811 KIF12Q96FN5 646 aa18.85■□□□□ 0.61
PHGDH-227ENST00000641811 UHRF1Q96T88 793 aaPredicted RBP18.85■□□□□ 0.61
PHGDH-227ENST00000641811 EMILIN2Q9BXX0 1053 aa18.85■□□□□ 0.61
PHGDH-227ENST00000641811 TTC28Q96AY4 2481 aa18.85■□□□□ 0.61
PHGDH-227ENST00000641811 FSD2A1L4K1 749 aa18.84■□□□□ 0.61
PHGDH-227ENST00000641811 TMEM189-UBE2V1I3L0A0 370 aa18.84■□□□□ 0.61
PHGDH-227ENST00000641811 TEX28O15482 410 aa18.84■□□□□ 0.61
PHGDH-227ENST00000641811 KLRC4O43908 158 aa18.84■□□□□ 0.61
PHGDH-227ENST00000641811 ADRB2P07550 413 aa18.84■□□□□ 0.61
PHGDH-227ENST00000641811 RPL17P18621 184 aaKnown RBP18.84■□□□□ 0.61
PHGDH-227ENST00000641811 GUCY2FP51841 1108 aa18.84■□□□□ 0.61
PHGDH-227ENST00000641811 PUS10Q3MIT2 529 aaKnown RBP18.84■□□□□ 0.61
PHGDH-227ENST00000641811 KANK3Q6NY19 840 aa18.84■□□□□ 0.61
PHGDH-227ENST00000641811 SYCE2Q6PIF2 218 aa18.84■□□□□ 0.61
PHGDH-227ENST00000641811 EPM2AIP1Q7L775 607 aaPredicted RBP18.84■□□□□ 0.61
PHGDH-227ENST00000641811 GLYCTKQ8IVS8 523 aa18.84■□□□□ 0.61
PHGDH-227ENST00000641811 SMRP1Q8NCR6 262 aa18.84■□□□□ 0.61
PHGDH-227ENST00000641811 SAAL1Q96ER3 474 aa18.84■□□□□ 0.61
PHGDH-227ENST00000641811 DDX27Q96GQ7 796 aaKnown RBP18.84■□□□□ 0.61
PHGDH-227ENST00000641811 CBWD1Q9BRT8 395 aa18.84■□□□□ 0.61
PHGDH-227ENST00000641811 PCIF1Q9H4Z3 704 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms