RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 FNBP1Q96RU3 617 aa14.18□□□□□ -0.14
PHGDH-221ENST00000641573 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.18□□□□□ -0.14
PHGDH-221ENST00000641573 CDT1Q9H211 546 aa14.18□□□□□ -0.14
PHGDH-221ENST00000641573 PDZD7Q9H5P4 517 aa14.18□□□□□ -0.14
PHGDH-221ENST00000641573 CDHR5Q9HBB8 845 aa14.18□□□□□ -0.14
PHGDH-221ENST00000641573 PDE11AQ9HCR9 933 aa14.18□□□□□ -0.14
PHGDH-221ENST00000641573 TRMT1Q9NXH9 659 aaKnown RBP14.18□□□□□ -0.14
PHGDH-221ENST00000641573 GTF2IRD1Q9UHL9 959 aa14.18□□□□□ -0.14
PHGDH-221ENST00000641573 MSRAQ9UJ68 235 aa14.18□□□□□ -0.14
PHGDH-221ENST00000641573 FBXL5Q9UKA1 691 aa14.18□□□□□ -0.14
PHGDH-221ENST00000641573 PLAGL2Q9UPG8 496 aa14.18□□□□□ -0.14
PHGDH-221ENST00000641573 GINS2Q9Y248 185 aa14.18□□□□□ -0.14
PHGDH-221ENST00000641573 CCP110O43303 1012 aa14.17□□□□□ -0.14
PHGDH-221ENST00000641573 ERLIN2O94905 339 aa14.17□□□□□ -0.14
PHGDH-221ENST00000641573 MCF2P10911 925 aa14.17□□□□□ -0.14
PHGDH-221ENST00000641573 ARF4P18085 180 aaPredicted RBP14.17□□□□□ -0.14
PHGDH-221ENST00000641573 CLCN1P35523 988 aa14.17□□□□□ -0.14
PHGDH-221ENST00000641573 TNFSF9P41273 254 aa14.17□□□□□ -0.14
PHGDH-221ENST00000641573 WNT7BP56706 349 aa14.17□□□□□ -0.14
PHGDH-221ENST00000641573 CLDN10P78369 228 aa14.17□□□□□ -0.14
PHGDH-221ENST00000641573 RAPGEF1Q13905 1077 aa14.17□□□□□ -0.14
PHGDH-221ENST00000641573 RAB30Q15771 203 aa14.17□□□□□ -0.14
PHGDH-221ENST00000641573 FAM47CQ5HY64 1035 aa14.17□□□□□ -0.14
PHGDH-221ENST00000641573 TAF2Q6P1X5 1199 aa14.17□□□□□ -0.14
PHGDH-221ENST00000641573 NME8Q8N427 588 aa14.17□□□□□ -0.14
PHGDH-221ENST00000641573 ZNF516Q92618 1163 aa14.17□□□□□ -0.14
PHGDH-221ENST00000641573 TOX2Q96NM4 488 aa14.17□□□□□ -0.14
PHGDH-221ENST00000641573 OSMRQ99650 979 aa14.17□□□□□ -0.14
PHGDH-221ENST00000641573 CGRRF1Q99675 332 aa14.17□□□□□ -0.14
PHGDH-221ENST00000641573 DESI2Q9BSY9 194 aa14.17□□□□□ -0.14
PHGDH-221ENST00000641573 AJAP1Q9UKB5 411 aaPredicted RBP14.17□□□□□ -0.14
PHGDH-221ENST00000641573 CPSF3Q9UKF6 684 aaKnown RBP14.17□□□□□ -0.14
PHGDH-221ENST00000641573 MYO6Q9UM54 1294 aa14.17□□□□□ -0.14
PHGDH-221ENST00000641573 PPP2R2CQ9Y2T4 447 aa14.17□□□□□ -0.14
PHGDH-221ENST00000641573 DAAM1Q9Y4D1 1078 aa14.17□□□□□ -0.14
PHGDH-221ENST00000641573 ZSCAN12O43309 604 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 TIMP1P01033 207 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 DARSP14868 501 aaKnown RBP14.16□□□□□ -0.14
PHGDH-221ENST00000641573 TNNI1P19237 187 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 FGFR4P22455 802 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 PBX2P40425 430 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 FAAP100Q0VG06 881 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 SURF1Q15526 300 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 ASIC2Q16515 512 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 LMBRD2Q68DH5 695 aaPredicted RBP14.16□□□□□ -0.14
PHGDH-221ENST00000641573 GDF6Q6KF10 455 aaPredicted RBP14.16□□□□□ -0.14
PHGDH-221ENST00000641573 C15orf39Q6ZRI6 1047 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 SV2AQ7L0J3 742 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 CATSPER4Q7RTX7 472 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 ANKRD33Q7Z3H0 272 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 SESTD1Q86VW0 696 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 GPIHBP1Q8IV16 184 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 THNSL1Q8IYQ7 743 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 ZNF710Q8N1W2 664 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 SEMA4DQ92854 862 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 PPP1R13BQ96KQ4 1090 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 NECAB3Q96P71 396 aaPredicted RBP14.16□□□□□ -0.14
PHGDH-221ENST00000641573 SPAG5Q96R06 1193 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 NHEJ1Q9H9Q4 299 aaPredicted RBP14.16□□□□□ -0.14
PHGDH-221ENST00000641573 SLC28A3Q9HAS3 691 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 STARD7Q9NQZ5 370 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 CXXC1Q9P0U4 656 aaPredicted RBP14.16□□□□□ -0.14
PHGDH-221ENST00000641573 APEX2Q9UBZ4 518 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 DNAJC12Q9UKB3 198 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 COQ4Q9Y3A0 265 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 ADGRG1Q9Y653 693 aa14.16□□□□□ -0.14
PHGDH-221ENST00000641573 EPN1Q9Y6I3 576 aaPredicted RBP14.16□□□□□ -0.14
PHGDH-221ENST00000641573 KAT6AQ92794 2004 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 A0A1B0GUA9 196 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 GRXCR1A8MXD5 290 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 RBAK-RBAKDNI3L0D1 243 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 CABYRO75952 493 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 C4BPAP04003 597 aaKnown RBP14.15□□□□□ -0.14
PHGDH-221ENST00000641573 SERPING1P05155 500 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 CCDC175P0C221 793 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 RFX1P22670 979 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 CRYBB1P53674 252 aaPredicted RBP14.15□□□□□ -0.14
PHGDH-221ENST00000641573 JAM2P57087 298 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 OSTNP61366 133 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 NCBP1Q09161 790 aaKnown RBP14.15□□□□□ -0.14
PHGDH-221ENST00000641573 ADGRE1Q14246 886 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 PCBP1Q15365 356 aaKnown RBP eCLIP14.15□□□□□ -0.14
PHGDH-221ENST00000641573 MFSD5Q6N075 450 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 PHLDB3Q6NSJ2 640 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 PSRC1Q6PGN9 363 aaPredicted RBP14.15□□□□□ -0.14
PHGDH-221ENST00000641573 CCDC170Q8IYT3 715 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 MICALL1Q8N3F8 863 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 TMEM199Q8N511 208 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 FBXL13Q8NEE6 735 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 TAS1R2Q8TE23 839 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 FAM84AQ96KN4 292 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 TSEN34Q9BSV6 310 aaKnown RBP14.15□□□□□ -0.14
PHGDH-221ENST00000641573 STK33Q9BYT3 514 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 MTIF3Q9H2K0 278 aaKnown RBP14.15□□□□□ -0.14
PHGDH-221ENST00000641573 AIPL1Q9NZN9 384 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 ARHGAP20Q9P2F6 1191 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 CHD9Q3L8U1 2897 aa14.15□□□□□ -0.14
PHGDH-221ENST00000641573 GRIN2DO15399 1336 aa14.15□□□□□ -0.15
PHGDH-221ENST00000641573 PTPRJQ12913 1337 aa14.15□□□□□ -0.15
PHGDH-221ENST00000641573 MROH7Q68CQ1 1323 aa14.15□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 299.4 ms