RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 EEF1DP3Q658K8 133 aa17.68■□□□□ 0.42
PHGDH-216ENST00000641375 CYP4F22Q6NT55 531 aa17.68■□□□□ 0.42
PHGDH-216ENST00000641375 OR5B17Q8NGF7 314 aa17.68■□□□□ 0.42
PHGDH-216ENST00000641375 LENG1Q96BZ8 264 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-216ENST00000641375 FAM212AQ96EL1 285 aa17.68■□□□□ 0.42
PHGDH-216ENST00000641375 PPP1R16BQ96T49 567 aa17.68■□□□□ 0.42
PHGDH-216ENST00000641375 RPF1Q9H9Y2 349 aaKnown RBP17.68■□□□□ 0.42
PHGDH-216ENST00000641375 HAS3O00219 553 aa17.67■□□□□ 0.42
PHGDH-216ENST00000641375 B4GALT4O60513 344 aa17.67■□□□□ 0.42
PHGDH-216ENST00000641375 PSEN2P49810 448 aa17.67■□□□□ 0.42
PHGDH-216ENST00000641375 GALCP54803 685 aa17.67■□□□□ 0.42
PHGDH-216ENST00000641375 ELF2Q15723 593 aa17.67■□□□□ 0.42
PHGDH-216ENST00000641375 MFSD14CQ5VZR4 134 aa17.67■□□□□ 0.42
PHGDH-216ENST00000641375 REM2Q8IYK8 340 aaPredicted RBP17.67■□□□□ 0.42
PHGDH-216ENST00000641375 RPUSD2Q8IZ73 545 aaKnown RBP17.67■□□□□ 0.42
PHGDH-216ENST00000641375 SLC20A1Q8WUM9 679 aa17.67■□□□□ 0.42
PHGDH-216ENST00000641375 CTNNBL1Q8WYA6 563 aaPredicted RBP17.67■□□□□ 0.42
PHGDH-216ENST00000641375 GOLGA1Q92805 767 aa17.67■□□□□ 0.42
PHGDH-216ENST00000641375 NOCTQ9UK39 431 aaKnown RBP17.67■□□□□ 0.42
PHGDH-216ENST00000641375 SNX12Q9UMY4 172 aa17.67■□□□□ 0.42
PHGDH-216ENST00000641375 DUSP11O75319 330 aaKnown RBP17.67■□□□□ 0.42
PHGDH-216ENST00000641375 PALMO75781 387 aa17.67■□□□□ 0.42
PHGDH-216ENST00000641375 TOMM70O94826 608 aa17.67■□□□□ 0.42
PHGDH-216ENST00000641375 SGPL1O95470 568 aa17.67■□□□□ 0.42
PHGDH-216ENST00000641375 MYL3P08590 195 aa17.67■□□□□ 0.42
PHGDH-216ENST00000641375 TMEM253P0C7T8 217 aa17.67■□□□□ 0.42
PHGDH-216ENST00000641375 GZMAP12544 262 aa17.67■□□□□ 0.42
PHGDH-216ENST00000641375 CYP11B1P15538 503 aa17.67■□□□□ 0.42
PHGDH-216ENST00000641375 BPIFB4P59827 614 aa17.67■□□□□ 0.42
PHGDH-216ENST00000641375 PCBP1Q15365 356 aaKnown RBP eCLIP17.67■□□□□ 0.422e-6■■■□□ 14.6
PHGDH-216ENST00000641375 FSCN1Q16658 493 aaKnown RBP17.67■□□□□ 0.42
PHGDH-216ENST00000641375 SLC47A2Q86VL8 602 aa17.67■□□□□ 0.42
PHGDH-216ENST00000641375 FAM84AQ96KN4 292 aa17.67■□□□□ 0.42
PHGDH-216ENST00000641375 PDZD7Q9H5P4 517 aa17.67■□□□□ 0.42
PHGDH-216ENST00000641375 CTAGE15A4D2H0 777 aa17.66■□□□□ 0.42
PHGDH-216ENST00000641375 ANKRD62A6NC57 917 aa17.66■□□□□ 0.42
PHGDH-216ENST00000641375 CSDE1O75534 798 aaKnown RBP17.66■□□□□ 0.42
PHGDH-216ENST00000641375 CLTAP09496 248 aa17.66■□□□□ 0.42
PHGDH-216ENST00000641375 CTAGE8P0CG41 777 aa17.66■□□□□ 0.42
PHGDH-216ENST00000641375 KRT5P13647 590 aa17.66■□□□□ 0.42
PHGDH-216ENST00000641375 TCP1P17987 556 aaKnown RBP17.66■□□□□ 0.42
PHGDH-216ENST00000641375 ARF4P18085 180 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-216ENST00000641375 NOP2P46087 812 aaKnown RBP17.66■□□□□ 0.42
PHGDH-216ENST00000641375 NOP14P78316 857 aaKnown RBP17.66■□□□□ 0.42
PHGDH-216ENST00000641375 CUL2Q13617 745 aa17.66■□□□□ 0.42
PHGDH-216ENST00000641375 RSRC2Q7L4I2 434 aaKnown RBP17.66■□□□□ 0.42
PHGDH-216ENST00000641375 NOP9Q86U38 636 aaKnown RBP17.66■□□□□ 0.42
PHGDH-216ENST00000641375 CTAGE6Q86UF2 777 aa17.66■□□□□ 0.42
PHGDH-216ENST00000641375 CTAGE4Q8IX94 777 aa17.66■□□□□ 0.42
PHGDH-216ENST00000641375 DHX38Q92620 1227 aaKnown RBP17.66■□□□□ 0.42
PHGDH-216ENST00000641375 ANKRD36BP1Q96IX9 119 aa17.66■□□□□ 0.42
PHGDH-216ENST00000641375 ADPGKQ9BRR6 497 aa17.66■□□□□ 0.42
PHGDH-216ENST00000641375 HYOU1Q9Y4L1 999 aa17.66■□□□□ 0.42
PHGDH-216ENST00000641375 GPR25O00155 361 aa17.66■□□□□ 0.42
PHGDH-216ENST00000641375 KPNA6O60684 536 aa17.66■□□□□ 0.42
PHGDH-216ENST00000641375 TMEM191BP0C7N4 346 aa17.66■□□□□ 0.42
PHGDH-216ENST00000641375 OSTNP61366 133 aa17.66■□□□□ 0.42
PHGDH-216ENST00000641375 CDR2Q01850 454 aa17.66■□□□□ 0.42
PHGDH-216ENST00000641375 CKAP4Q07065 602 aaKnown RBP17.66■□□□□ 0.42
PHGDH-216ENST00000641375 CDR2LQ86X02 465 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-216ENST00000641375 RPGRIP1Q96KN7 1286 aa17.66■□□□□ 0.42
PHGDH-216ENST00000641375 GCOM2Q9BZD3 368 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-216ENST00000641375 MTMR12Q9C0I1 747 aa17.66■□□□□ 0.42
PHGDH-216ENST00000641375 ISCUQ9H1K1 167 aa17.66■□□□□ 0.42
PHGDH-216ENST00000641375 PUF60Q9UHX1 559 aaKnown RBP17.66■□□□□ 0.42
PHGDH-216ENST00000641375 CASP8AP2Q9UKL3 1982 aa17.65■□□□□ 0.42
PHGDH-216ENST00000641375 A0A1B0GUA9 196 aa17.65■□□□□ 0.42
PHGDH-216ENST00000641375 TMCO5BA8MYB1 307 aa17.65■□□□□ 0.42
PHGDH-216ENST00000641375 TSPAN1O60635 241 aa17.65■□□□□ 0.42
PHGDH-216ENST00000641375 RTN2O75298 545 aa17.65■□□□□ 0.42
PHGDH-216ENST00000641375 TNNC2P02585 160 aa17.65■□□□□ 0.42
PHGDH-216ENST00000641375 CYP2C9P11712 490 aa17.65■□□□□ 0.42
PHGDH-216ENST00000641375 SGSM1Q2NKQ1 1148 aa17.65■□□□□ 0.42
PHGDH-216ENST00000641375 SMYD5Q6GMV2 418 aa17.65■□□□□ 0.42
PHGDH-216ENST00000641375 APBB1IPQ7Z5R6 666 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-216ENST00000641375 ZNF677Q86XU0 584 aa17.65■□□□□ 0.42
PHGDH-216ENST00000641375 CEP120Q8N960 986 aa17.65■□□□□ 0.42
PHGDH-216ENST00000641375 RFFLQ8WZ73 363 aa17.65■□□□□ 0.42
PHGDH-216ENST00000641375 CALR3Q96L12 384 aaKnown RBP17.65■□□□□ 0.42
PHGDH-216ENST00000641375 FAM49AQ9H0Q0 323 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-216ENST00000641375 PCDHB2Q9Y5E7 798 aa17.65■□□□□ 0.42
PHGDH-216ENST00000641375 NCANO14594 1321 aa17.65■□□□□ 0.42
PHGDH-216ENST00000641375 CLSTN1O94985 981 aa17.64■□□□□ 0.42
PHGDH-216ENST00000641375 ASS1P00966 412 aaKnown RBP17.64■□□□□ 0.42
PHGDH-216ENST00000641375 STAG3L1P0CL83 205 aa17.64■□□□□ 0.42
PHGDH-216ENST00000641375 GNAT1P11488 350 aa17.64■□□□□ 0.42
PHGDH-216ENST00000641375 CYBAP13498 195 aa17.64■□□□□ 0.42
PHGDH-216ENST00000641375 ADAM17P78536 824 aa17.64■□□□□ 0.42
PHGDH-216ENST00000641375 TFAMQ00059 246 aaKnown RBP17.64■□□□□ 0.42
PHGDH-216ENST00000641375 BEX3Q00994 111 aa17.64■□□□□ 0.42
PHGDH-216ENST00000641375 TRPC3Q13507 836 aa17.64■□□□□ 0.42
PHGDH-216ENST00000641375 KIZQ2M2Z5 673 aa17.64■□□□□ 0.42
PHGDH-216ENST00000641375 SPOPLQ6IQ16 392 aa17.64■□□□□ 0.42
PHGDH-216ENST00000641375 PALB2Q86YC2 1186 aa17.64■□□□□ 0.42
PHGDH-216ENST00000641375 SYCE1Q8N0S2 351 aa17.64■□□□□ 0.42
PHGDH-216ENST00000641375 RABGGTAQ92696 567 aa17.64■□□□□ 0.42
PHGDH-216ENST00000641375 CPB2Q96IY4 423 aa17.64■□□□□ 0.42
PHGDH-216ENST00000641375 ARHGAP39Q9C0H5 1083 aa17.64■□□□□ 0.42
PHGDH-216ENST00000641375 ADAMTS10Q9H324 1103 aa17.64■□□□□ 0.42
PHGDH-216ENST00000641375 ASB7Q9H672 318 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms