RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 WDR27A2RRH5 827 aa10.78□□□□□ -0.68
PHGDH-212ENST00000641247 TTLL13PA6NNM8 815 aa10.78□□□□□ -0.68
PHGDH-212ENST00000641247 PAPSS2O95340 614 aaPredicted RBP10.78□□□□□ -0.68
PHGDH-212ENST00000641247 NPTXRO95502 500 aa10.78□□□□□ -0.68
PHGDH-212ENST00000641247 HSP90AA1P07900 732 aaKnown RBP10.78□□□□□ -0.68
PHGDH-212ENST00000641247 GJA1P17302 382 aa10.78□□□□□ -0.68
PHGDH-212ENST00000641247 PPP2R5DQ14738 602 aa10.78□□□□□ -0.68
PHGDH-212ENST00000641247 ADCK5Q3MIX3 580 aa10.78□□□□□ -0.68
PHGDH-212ENST00000641247 PKN3Q6P5Z2 889 aa10.78□□□□□ -0.68
PHGDH-212ENST00000641247 NOTUMQ6P988 496 aa10.78□□□□□ -0.68
PHGDH-212ENST00000641247 CEP68Q76N32 757 aa10.78□□□□□ -0.68
PHGDH-212ENST00000641247 GPIHBP1Q8IV16 184 aa10.78□□□□□ -0.68
PHGDH-212ENST00000641247 HS6ST3Q8IZP7 471 aa10.78□□□□□ -0.68
PHGDH-212ENST00000641247 ASAP3Q8TDY4 903 aa10.78□□□□□ -0.68
PHGDH-212ENST00000641247 TBCKQ8TEA7 893 aa10.78□□□□□ -0.68
PHGDH-212ENST00000641247 IER2Q9BTL4 223 aa10.78□□□□□ -0.68
PHGDH-212ENST00000641247 ZFP14Q9HCL3 533 aa10.78□□□□□ -0.68
PHGDH-212ENST00000641247 TRPV5Q9NQA5 729 aa10.78□□□□□ -0.68
PHGDH-212ENST00000641247 POLR3BQ9NW08 1133 aaPredicted RBP10.78□□□□□ -0.68
PHGDH-212ENST00000641247 MTRRQ9UBK8 725 aa10.78□□□□□ -0.68
PHGDH-212ENST00000641247 CDY1Q9Y6F8 540 aa10.78□□□□□ -0.68
PHGDH-212ENST00000641247 MTCL1Q9Y4B5 1905 aaKnown RBP10.78□□□□□ -0.68
PHGDH-212ENST00000641247 CYP3A7-CYP3A51PA0A087WV96 503 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 KLF18A0A0U1RQI7 1052 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 I3L4J1 428 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 INO80B-WBP1J3KQ70 363 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 TAF4O00268 1085 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 PRPF3O43395 683 aaKnown RBP10.77□□□□□ -0.69
PHGDH-212ENST00000641247 EXTL3O43909 919 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 ERLIN2O94905 339 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 EPN2O95208 641 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 SEC24AO95486 1093 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 PTPN2P17706 415 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 PSMC3P17980 439 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 FGFR3P22607 806 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 CYP3A7P24462 503 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 AXLP30530 894 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 TUSC3Q13454 348 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 WDR5BQ86VZ2 330 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 RASEFQ8IZ41 740 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 C12orf50Q8NA57 414 aaPredicted RBP10.77□□□□□ -0.69
PHGDH-212ENST00000641247 TTC8Q8TAM2 541 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 SLC7A3Q8WY07 619 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 IRF7Q92985 503 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 LRRC3BQ96PB8 259 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 JPH2Q9BR39 696 aaPredicted RBP10.77□□□□□ -0.69
PHGDH-212ENST00000641247 CORO1BQ9BR76 489 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 VPS54Q9P1Q0 977 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 VAV3Q9UKW4 847 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 LHX6Q9UPM6 363 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 USP20Q9Y2K6 914 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 COL4A2P08572 1712 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 CNOT1A5YKK6 2376 aaKnown RBP10.77□□□□□ -0.69
PHGDH-212ENST00000641247 MYH9P35579 1960 aaKnown RBP10.77□□□□□ -0.69
PHGDH-212ENST00000641247 ZZEF1O43149 2961 aa10.77□□□□□ -0.69
PHGDH-212ENST00000641247 PKD1L2Q7Z442 2459 aa10.76□□□□□ -0.69
PHGDH-212ENST00000641247 A0A1B0GUA9 196 aa10.76□□□□□ -0.69
PHGDH-212ENST00000641247 C4orf47A7E2U8 309 aa10.76□□□□□ -0.69
PHGDH-212ENST00000641247 SLC37A4O43826 429 aa10.76□□□□□ -0.69
PHGDH-212ENST00000641247 FOXD2O60548 495 aaPredicted RBP10.76□□□□□ -0.69
PHGDH-212ENST00000641247 TKTP29401 623 aaKnown RBP10.76□□□□□ -0.69
PHGDH-212ENST00000641247 GNA11P29992 359 aa10.76□□□□□ -0.69
PHGDH-212ENST00000641247 QARSP47897 775 aaKnown RBP10.76□□□□□ -0.69
PHGDH-212ENST00000641247 NOVA1P51513 510 aaKnown RBP10.76□□□□□ -0.69
PHGDH-212ENST00000641247 CAPSQ13938 189 aa10.76□□□□□ -0.69
PHGDH-212ENST00000641247 EMC2Q15006 297 aa10.76□□□□□ -0.69
PHGDH-212ENST00000641247 NFKBIBQ15653 356 aa10.76□□□□□ -0.69
PHGDH-212ENST00000641247 NTRK3Q16288 839 aa10.76□□□□□ -0.69
PHGDH-212ENST00000641247 IFNLR1Q8IU57 520 aaPredicted RBP10.76□□□□□ -0.69
PHGDH-212ENST00000641247 C3orf58Q8NDZ4 430 aa10.76□□□□□ -0.69
PHGDH-212ENST00000641247 CCDC51Q96ER9 411 aa10.76□□□□□ -0.69
PHGDH-212ENST00000641247 KIF2CQ99661 725 aa10.76□□□□□ -0.69
PHGDH-212ENST00000641247 SCNM1Q9BWG6 230 aa10.76□□□□□ -0.69
PHGDH-212ENST00000641247 ADAM33Q9BZ11 813 aa10.76□□□□□ -0.69
PHGDH-212ENST00000641247 SNTG2Q9NY99 539 aa10.76□□□□□ -0.69
PHGDH-212ENST00000641247 RGL1Q9NZL6 768 aa10.76□□□□□ -0.69
PHGDH-212ENST00000641247 CEP295Q9C0D2 2601 aa10.75□□□□□ -0.69
PHGDH-212ENST00000641247 F5P12259 2224 aa10.75□□□□□ -0.69
PHGDH-212ENST00000641247 A0A087WWV3 80 aa10.75□□□□□ -0.69
PHGDH-212ENST00000641247 ARHGEF37A1IGU5 675 aa10.75□□□□□ -0.69
PHGDH-212ENST00000641247 SLC38A8A6NNN8 435 aa10.75□□□□□ -0.69
PHGDH-212ENST00000641247 HEPACAM2A8MVW5 462 aa10.75□□□□□ -0.69
PHGDH-212ENST00000641247 ZNF263O14978 683 aa10.75□□□□□ -0.69
PHGDH-212ENST00000641247 ASAP2O43150 1006 aa10.75□□□□□ -0.69
PHGDH-212ENST00000641247 ABLIM3O94929 683 aa10.75□□□□□ -0.69
PHGDH-212ENST00000641247 CPA1P15085 419 aa10.75□□□□□ -0.69
PHGDH-212ENST00000641247 GLRA2P23416 452 aa10.75□□□□□ -0.69
PHGDH-212ENST00000641247 HOXA6P31267 233 aa10.75□□□□□ -0.69
PHGDH-212ENST00000641247 YWHABP31946 246 aaKnown RBP10.75□□□□□ -0.69
PHGDH-212ENST00000641247 HSPA4P34932 840 aa10.75□□□□□ -0.69
PHGDH-212ENST00000641247 RFC5P40937 340 aa10.75□□□□□ -0.69
PHGDH-212ENST00000641247 BRCC3P46736 316 aa10.75□□□□□ -0.69
PHGDH-212ENST00000641247 ANAPC15P60006 121 aa10.75□□□□□ -0.69
PHGDH-212ENST00000641247 ROR1Q01973 937 aa10.75□□□□□ -0.69
PHGDH-212ENST00000641247 ZNF252P-AS1Q0IIN9 211 aa10.75□□□□□ -0.69
PHGDH-212ENST00000641247 SOWAHCQ53LP3 525 aaPredicted RBP10.75□□□□□ -0.69
PHGDH-212ENST00000641247 RNF43Q68DV7 783 aa10.75□□□□□ -0.69
PHGDH-212ENST00000641247 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.75□□□□□ -0.69
PHGDH-212ENST00000641247 DHX32Q7L7V1 743 aaKnown RBP10.75□□□□□ -0.69
PHGDH-212ENST00000641247 MFSD6LQ8IWD5 586 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms