RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 LLGL1Q15334 1064 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 TRIP13Q15645 432 aaPredicted RBP11.66□□□□□ -0.54
SCN1B-208ENST00000640135 MGAT5BQ3V5L5 792 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 SYDE1Q6ZW31 735 aaPredicted RBP11.66□□□□□ -0.54
SCN1B-208ENST00000640135 SYTL5Q8TDW5 730 aaPredicted RBP11.66□□□□□ -0.54
SCN1B-208ENST00000640135 KCNB2Q92953 911 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 CDCA5Q96FF9 252 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 DRC3Q9H069 523 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 UNC45AQ9H3U1 944 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 EPS15L1Q9UBC2 864 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 IFNA8P32881 189 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 GFPT1Q06210 699 aaPredicted RBP11.66□□□□□ -0.54
SCN1B-208ENST00000640135 TMTC4Q5T4D3 741 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 TRIM67Q6ZTA4 783 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 N4BP2L2Q92802 583 aaPredicted RBP11.66□□□□□ -0.54
SCN1B-208ENST00000640135 HPDLQ96IR7 371 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.66□□□□□ -0.54
SCN1B-208ENST00000640135 TARS2Q9BW92 718 aaKnown RBP11.66□□□□□ -0.54
SCN1B-208ENST00000640135 AP1M1Q9BXS5 423 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 PPP1R12CQ9BZL4 782 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 FHDC1Q9C0D6 1143 aaPredicted RBP11.66□□□□□ -0.54
SCN1B-208ENST00000640135 CATSPERBQ9H7T0 1116 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 FAN1Q9Y2M0 1017 aa11.66□□□□□ -0.54
SCN1B-208ENST00000640135 ITIH6Q6UXX5 1313 aa11.65□□□□□ -0.54
SCN1B-208ENST00000640135 FAM200BP0CF97 657 aa11.65□□□□□ -0.54
SCN1B-208ENST00000640135 SULT1E1P49888 294 aa11.65□□□□□ -0.54
SCN1B-208ENST00000640135 NPEPPSP55786 919 aa11.65□□□□□ -0.54
SCN1B-208ENST00000640135 REM2Q8IYK8 340 aaPredicted RBP11.65□□□□□ -0.54
SCN1B-208ENST00000640135 SENP7Q9BQF6 1050 aa11.65□□□□□ -0.54
SCN1B-208ENST00000640135 TSSK1BQ9BXA7 367 aa11.65□□□□□ -0.54
SCN1B-208ENST00000640135 TRPC7Q9HCX4 862 aa11.65□□□□□ -0.54
SCN1B-208ENST00000640135 SAYSD1Q9NPB0 183 aa11.65□□□□□ -0.54
SCN1B-208ENST00000640135 ZNF197O14709 1029 aa11.65□□□□□ -0.54
SCN1B-208ENST00000640135 TOM1L1O75674 476 aa11.65□□□□□ -0.54
SCN1B-208ENST00000640135 HARS2P49590 506 aaKnown RBP11.65□□□□□ -0.54
SCN1B-208ENST00000640135 RPL10AP62906 217 aaKnown RBP11.65□□□□□ -0.54
SCN1B-208ENST00000640135 C2orf54Q08AI8 447 aa11.65□□□□□ -0.54
SCN1B-208ENST00000640135 TMEM62Q0P6H9 643 aa11.65□□□□□ -0.54
SCN1B-208ENST00000640135 MYBPC2Q14324 1141 aa11.65□□□□□ -0.54
SCN1B-208ENST00000640135 TDRD10Q5VZ19 366 aaKnown RBP11.65□□□□□ -0.54
SCN1B-208ENST00000640135 NOP9Q86U38 636 aaKnown RBP11.65□□□□□ -0.54
SCN1B-208ENST00000640135 SEPT5Q99719 369 aaPredicted RBP11.65□□□□□ -0.54
SCN1B-208ENST00000640135 HEMGNQ9BXL5 484 aa11.65□□□□□ -0.54
SCN1B-208ENST00000640135 HMX1Q9NP08 348 aaPredicted RBP11.65□□□□□ -0.54
SCN1B-208ENST00000640135 TMEM51Q9NW97 253 aa11.65□□□□□ -0.54
SCN1B-208ENST00000640135 GPRC5DQ9NZD1 345 aa11.65□□□□□ -0.54
SCN1B-208ENST00000640135 SCAF8Q9UPN6 1271 aaKnown RBP11.65□□□□□ -0.54
SCN1B-208ENST00000640135 KIF3CO14782 793 aa11.65□□□□□ -0.54
SCN1B-208ENST00000640135 ZC3H11AO75152 810 aaKnown RBP eCLIP11.65□□□□□ -0.54
SCN1B-208ENST00000640135 AP1B1Q10567 949 aa11.65□□□□□ -0.54
SCN1B-208ENST00000640135 LMBRD2Q68DH5 695 aaPredicted RBP11.65□□□□□ -0.54
SCN1B-208ENST00000640135 KIRREL3Q8IZU9 778 aa11.65□□□□□ -0.54
SCN1B-208ENST00000640135 ZBTB9Q96C00 473 aa11.65□□□□□ -0.54
SCN1B-208ENST00000640135 GLIS2Q9BZE0 524 aaPredicted RBP11.65□□□□□ -0.54
SCN1B-208ENST00000640135 Q9H521 79 aa11.65□□□□□ -0.54
SCN1B-208ENST00000640135 ADAMTSL3P82987 1691 aa11.65□□□□□ -0.55
SCN1B-208ENST00000640135 NPHP3-ACAD11A0A0J9YXS1 232 aa11.65□□□□□ -0.55
SCN1B-208ENST00000640135 E5RI56 91 aa11.65□□□□□ -0.55
SCN1B-208ENST00000640135 H3BRB1 525 aa11.65□□□□□ -0.55
SCN1B-208ENST00000640135 NVLO15381 856 aaKnown RBP11.65□□□□□ -0.55
SCN1B-208ENST00000640135 NPM3O75607 178 aaKnown RBP11.65□□□□□ -0.55
SCN1B-208ENST00000640135 SHMT1P34896 483 aa11.65□□□□□ -0.55
SCN1B-208ENST00000640135 P3H1Q32P28 736 aa11.65□□□□□ -0.55
SCN1B-208ENST00000640135 CYP4A22Q5TCH4 519 aa11.65□□□□□ -0.55
SCN1B-208ENST00000640135 IQSEC1Q6DN90 963 aa11.65□□□□□ -0.55
SCN1B-208ENST00000640135 MPZL3Q6UWV2 235 aa11.65□□□□□ -0.55
SCN1B-208ENST00000640135 DCLK2Q8N568 766 aa11.65□□□□□ -0.55
SCN1B-208ENST00000640135 ATP8B4Q8TF62 1192 aa11.65□□□□□ -0.55
SCN1B-208ENST00000640135 EFHD1Q9BUP0 239 aa11.65□□□□□ -0.55
SCN1B-208ENST00000640135 TUT1Q9H6E5 874 aaKnown RBP11.65□□□□□ -0.55
SCN1B-208ENST00000640135 FAM205CA6NFA0 338 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 SMAPO00193 183 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 VWA5AO00534 786 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 UCHL3P15374 230 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 NOGQ13253 232 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 DHX34Q14147 1143 aaKnown RBP11.64□□□□□ -0.55
SCN1B-208ENST00000640135 SLC18A3Q16572 532 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 C4orf22Q6V702 233 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 PID1Q7Z2X4 250 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 TMEM60Q9H2L4 133 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 SLC13A4Q9UKG4 626 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.64□□□□□ -0.55
SCN1B-208ENST00000640135 C3orf70A6NLC5 250 aaPredicted RBP11.64□□□□□ -0.55
SCN1B-208ENST00000640135 ATP1A2P50993 1020 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 STK4Q13043 487 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 SEC23AQ15436 765 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 FAM117BQ6P1L5 589 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 TBC1D19Q8N5T2 526 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 CCDC197Q8NCU1 140 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 ANKS1AQ92625 1134 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 RMDN1Q96DB5 314 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 SUN2Q9UH99 717 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 NR2E3Q9Y5X4 410 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 COPEO14579 308 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 URODP06132 367 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 KLRC1P26715 233 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 NFE2Q16621 373 aaPredicted RBP11.64□□□□□ -0.55
SCN1B-208ENST00000640135 SHCBP1Q8NEM2 672 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 BCAS4Q8TDM0 211 aa11.64□□□□□ -0.55
SCN1B-208ENST00000640135 DCUN1D1Q96GG9 259 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms