RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 EIF2AQ9BY44 585 aaKnown RBP6.1□□□□□ -1.43
PDE4D-229ENST00000638939 TRIM6Q9C030 488 aaPredicted RBP6.1□□□□□ -1.43
PDE4D-229ENST00000638939 CSRNP2Q9H175 543 aa6.1□□□□□ -1.43
PDE4D-229ENST00000638939 TBC1D17Q9HA65 648 aa6.1□□□□□ -1.43
PDE4D-229ENST00000638939 XPNPEP1Q9NQW7 623 aa6.1□□□□□ -1.43
PDE4D-229ENST00000638939 ARHGEF3Q9NR81 526 aa6.1□□□□□ -1.43
PDE4D-229ENST00000638939 DLGAP2Q9P1A6 1054 aa6.1□□□□□ -1.43
PDE4D-229ENST00000638939 FBXW11Q9UKB1 542 aa6.1□□□□□ -1.43
PDE4D-229ENST00000638939 ADAM28Q9UKQ2 775 aa6.1□□□□□ -1.43
PDE4D-229ENST00000638939 PRG3Q9Y2Y8 225 aaPredicted RBP6.1□□□□□ -1.43
PDE4D-229ENST00000638939 PCDHB9Q9Y5E1 797 aa6.1□□□□□ -1.43
PDE4D-229ENST00000638939 PCDHB3Q9Y5E6 796 aa6.1□□□□□ -1.43
PDE4D-229ENST00000638939 CFAP47Q6ZTR5 3102 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 USP24Q9UPU5 2620 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 F8W810 466 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 INO80B-WBP1J3KQ70 363 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 TGM5O43548 720 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 CCNT1O60563 726 aaKnown RBP6.09□□□□□ -1.43
PDE4D-229ENST00000638939 DGAT1O75907 488 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 F12P00748 615 aaPredicted RBP6.09□□□□□ -1.43
PDE4D-229ENST00000638939 LMNAP02545 664 aaKnown RBP6.09□□□□□ -1.43
PDE4D-229ENST00000638939 HNRNPA1P09651 372 aaKnown RBP eCLIP6.09□□□□□ -1.43
PDE4D-229ENST00000638939 LAMP2P13473 410 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 ARF4P18085 180 aaPredicted RBP6.09□□□□□ -1.43
PDE4D-229ENST00000638939 MSS51Q4VC12 460 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 XKR9Q5GH70 373 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 VARS2Q5ST30 1063 aaKnown RBP6.09□□□□□ -1.43
PDE4D-229ENST00000638939 CDCA2Q69YH5 1023 aaPredicted RBP6.09□□□□□ -1.43
PDE4D-229ENST00000638939 NCAPH2Q6IBW4 605 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 LILRA6Q6PI73 481 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 GET4Q7L5D6 327 aaPredicted RBP6.09□□□□□ -1.43
PDE4D-229ENST00000638939 TAS1R1Q7RTX1 841 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 ANKMY2Q8IV38 441 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 SLC44A3Q8N4M1 653 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 GPR152Q8TDT2 470 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 ASAP3Q8TDY4 903 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 RSAD2Q8WXG1 361 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 PIK3R5Q8WYR1 880 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 DYDC2Q96IM9 177 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 CPB2Q96IY4 423 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 COLEC11Q9BWP8 271 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 GPR62Q9BZJ7 368 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 PRKD2Q9BZL6 878 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 NT5C3AQ9H0P0 336 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 SLKQ9H2G2 1235 aaPredicted RBP6.09□□□□□ -1.43
PDE4D-229ENST00000638939 ANKEF1Q9NU02 776 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 RGL1Q9NZL6 768 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 CA14Q9ULX7 337 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 KCNJ14Q9UNX9 436 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 HES2Q9Y543 173 aa6.09□□□□□ -1.43
PDE4D-229ENST00000638939 A0A1B0GUA9 196 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 TMEM189-UBE2V1I3L0A0 370 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 B4GALT5O43286 388 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 SLITRK3O94933 977 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 BAG4O95429 457 aaKnown RBP6.08□□□□□ -1.44
PDE4D-229ENST00000638939 GLRA2P23416 452 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 ARL2P36404 184 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 MAGEA9P43362 315 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 RARRES1P49788 294 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 STARD6P59095 220 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 CYP4A11Q02928 519 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 SCRN1Q12765 414 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 ELAVL2Q12926 359 aaKnown RBP6.08□□□□□ -1.44
PDE4D-229ENST00000638939 STK3Q13188 491 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 TUSC3Q13454 348 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 NCOA4Q13772 614 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 CTTNQ14247 550 aaKnown RBP6.08□□□□□ -1.44
PDE4D-229ENST00000638939 HSP90AA2PQ14568 343 aaPredicted RBP6.08□□□□□ -1.44
PDE4D-229ENST00000638939 FAM187BQ17R55 369 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 RTP2Q5QGT7 225 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 LIN9Q5TKA1 542 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 PDXDC1Q6P996 788 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 BRICD5Q6PL45 260 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 PIK3AP1Q6ZUJ8 805 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 MTSS1LQ765P7 747 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 RTL10Q7L3V2 364 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 PLPP7Q8NBV4 271 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 MCPH1Q8NEM0 835 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 C1orf216Q8TAB5 229 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 STK32AQ8WU08 396 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 RIN2Q8WYP3 895 aaPredicted RBP6.08□□□□□ -1.44
PDE4D-229ENST00000638939 WASF1Q92558 559 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 TNFRSF25Q93038 417 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 BORCS6Q96GS4 357 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 SHDQ96IW2 340 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 CCDC43Q96MW1 224 aaKnown RBP6.08□□□□□ -1.44
PDE4D-229ENST00000638939 HSD17B14Q9BPX1 270 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 EIF2AK1Q9BQI3 630 aaKnown RBP6.08□□□□□ -1.44
PDE4D-229ENST00000638939 ARHGAP9Q9BRR9 750 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 DDX23Q9BUQ8 820 aaKnown RBP6.08□□□□□ -1.44
PDE4D-229ENST00000638939 POLR3FQ9H1D9 316 aaPredicted RBP6.08□□□□□ -1.44
PDE4D-229ENST00000638939 PIDD1Q9HB75 910 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 BRMS1Q9HCU9 246 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 PRMT7Q9NVM4 692 aaPredicted RBP6.08□□□□□ -1.44
PDE4D-229ENST00000638939 MIOSQ9NXC5 875 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 EGFL7Q9UHF1 273 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 ZMIZ1Q9ULJ6 1067 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 SIT1Q9Y3P8 196 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 NUMBLQ9Y6R0 609 aa6.08□□□□□ -1.44
PDE4D-229ENST00000638939 CNOT1A5YKK6 2376 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms