RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 TRAIPQ9BWF2 469 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 GPRC5CQ9NQ84 441 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 ZHX2Q9Y6X8 837 aa11.64□□□□□ -0.55
SNIP1-204ENST00000638725 NRXN2Q9P2S2 1712 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 SORBS3O60504 671 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 RARRES1P49788 294 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 MKRN3Q13064 507 aaKnown RBP11.63□□□□□ -0.55
SNIP1-204ENST00000638725 GRIPAP1Q4V328 841 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 TMEM63BQ5T3F8 832 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 RNF43Q68DV7 783 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 TAS1R2Q8TE23 839 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 FAM84AQ96KN4 292 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 PAIP2Q9BPZ3 127 aaKnown RBP11.63□□□□□ -0.55
SNIP1-204ENST00000638725 TRIM6Q9C030 488 aaPredicted RBP11.63□□□□□ -0.55
SNIP1-204ENST00000638725 TDRD3Q9H7E2 651 aaKnown RBP11.63□□□□□ -0.55
SNIP1-204ENST00000638725 LGALS13Q9UHV8 139 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 TOM1O60784 492 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 CDH16O75309 829 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 TCEA3O75764 348 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 CCNB1P14635 433 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 ITGB5P18084 799 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 PEX3P56589 373 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 LACTBP83111 547 aaPredicted RBP11.63□□□□□ -0.55
SNIP1-204ENST00000638725 STRN3Q13033 797 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 ALCAMQ13740 583 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 TMED2Q15363 201 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 SNRNP35Q16560 246 aaKnown RBP11.63□□□□□ -0.55
SNIP1-204ENST00000638725 CLEC16AQ2KHT3 1053 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 KRT39Q6A163 491 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 EP400NLQ6ZTU2 488 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 GRK7Q8WTQ7 553 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 PITPNM3Q9BZ71 974 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 ETNK1Q9HBU6 452 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 SLC5A4Q9NY91 659 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 USP20Q9Y2K6 914 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 MROH7Q68CQ1 1323 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 UBR3Q6ZT12 1888 aa11.63□□□□□ -0.55
SNIP1-204ENST00000638725 RASA4BC9J798 803 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 RASA4O43374 803 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 UNC5CO95185 931 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 MAPTP10636 758 aaKnown RBP11.62□□□□□ -0.55
SNIP1-204ENST00000638725 KRT5P13647 590 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 WDR4P57081 412 aaKnown RBP11.62□□□□□ -0.55
SNIP1-204ENST00000638725 GTF2BQ00403 316 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 CYP4F22Q6NT55 531 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 SYDE1Q6ZW31 735 aaPredicted RBP11.62□□□□□ -0.55
SNIP1-204ENST00000638725 ATL2Q8NHH9 583 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 KCNV2Q8TDN2 545 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 SPOCK2Q92563 424 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 UTP4Q969X6 686 aaKnown RBP11.62□□□□□ -0.55
SNIP1-204ENST00000638725 DDX27Q96GQ7 796 aaKnown RBP11.62□□□□□ -0.55
SNIP1-204ENST00000638725 NT5C1BQ96P26 610 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 MXRA8Q9BRK3 442 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 MYLK2Q9H1R3 596 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 EHMT1Q9H9B1 1298 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 SLC24A3Q9HC58 644 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 PMM2O15305 246 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 SPAG7O75391 227 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 P4HBP07237 508 aaKnown RBP11.62□□□□□ -0.55
SNIP1-204ENST00000638725 CHRM1P11229 460 aaPredicted RBP11.62□□□□□ -0.55
SNIP1-204ENST00000638725 RALAP11233 206 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 ADSSP30520 456 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 MAN1A1P33908 653 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 ATP11AP98196 1134 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 CAV1Q03135 178 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 ZYXQ15942 572 aaKnown RBP11.62□□□□□ -0.55
SNIP1-204ENST00000638725 IZUMO3Q5VZ72 239 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 PARD3BQ8TEW8 1205 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 MAIP1Q8WWC4 291 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 CPA5Q8WXQ8 436 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 RIT2Q99578 217 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 PI4K2AQ9BTU6 479 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 ARHGEF10LQ9HCE6 1279 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 EURLQ9NYK6 297 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 GSTTP1A0A1W2PQM5 241 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 MAPK13O15264 365 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 ATP2A2P16615 1042 aaKnown RBP11.62□□□□□ -0.55
SNIP1-204ENST00000638725 ACVR2BQ13705 512 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 PPP1R21Q6ZMI0 780 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 ZNF365Q70YC5 407 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 MCOLN2Q8IZK6 566 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 FBF1Q8TES7 1133 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 TMEM174Q8WUU8 243 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 KIFAP3Q92845 792 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 ERP27Q96DN0 273 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 CSRNP1Q96S65 589 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 KIFC3Q9BVG8 833 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 BATF3Q9NR55 127 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 MRPL11Q9Y3B7 192 aaKnown RBP11.62□□□□□ -0.55
SNIP1-204ENST00000638725 NEU2Q9Y3R4 380 aa11.62□□□□□ -0.55
SNIP1-204ENST00000638725 GJC1P36383 396 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 GPC3P51654 580 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 IL9RQ01113 521 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 SPP2Q13103 211 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 DNAJC3Q13217 504 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 STAT4Q14765 748 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 ANKRD20A2Q5SQ80 823 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 ANKRD20A1Q5TYW2 823 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 ANKRD20A3Q5VUR7 823 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 FBXL13Q8NEE6 735 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms