RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 CYP26A1O43174 497 aa23.37■■□□□ 1.33
SCARB2-212ENST00000638663 MOCS3O95396 460 aa23.37■■□□□ 1.33
SCARB2-212ENST00000638663 GTF2F1P35269 517 aaKnown RBP eCLIP23.37■■□□□ 1.33
SCARB2-212ENST00000638663 C10orf76Q5T2E6 689 aa23.37■■□□□ 1.33
SCARB2-212ENST00000638663 SCARA3Q6AZY7 606 aa23.37■■□□□ 1.33
SCARB2-212ENST00000638663 ZNF784Q8NCA9 323 aaPredicted RBP23.37■■□□□ 1.33
SCARB2-212ENST00000638663 SLC30A5Q8TAD4 765 aa23.37■■□□□ 1.33
SCARB2-212ENST00000638663 MTG1Q9BT17 334 aaPredicted RBP23.37■■□□□ 1.33
SCARB2-212ENST00000638663 SRRDQ9UH36 339 aa23.37■■□□□ 1.33
SCARB2-212ENST00000638663 NENFQ9UMX5 172 aa23.37■■□□□ 1.33
SCARB2-212ENST00000638663 CASP8AP2Q9UKL3 1982 aa23.37■■□□□ 1.33
SCARB2-212ENST00000638663 TRIP12Q14669 1992 aaPredicted RBP23.37■■□□□ 1.33
SCARB2-212ENST00000638663 CLSTN1O94985 981 aa23.37■■□□□ 1.33
SCARB2-212ENST00000638663 SGPL1O95470 568 aa23.37■■□□□ 1.33
SCARB2-212ENST00000638663 TNFAIP3P21580 790 aa23.37■■□□□ 1.33
SCARB2-212ENST00000638663 VEGFBP49765 207 aa23.37■■□□□ 1.33
SCARB2-212ENST00000638663 TFAMQ00059 246 aaKnown RBP23.37■■□□□ 1.33
SCARB2-212ENST00000638663 NCOA4Q13772 614 aa23.37■■□□□ 1.33
SCARB2-212ENST00000638663 DUOXA2Q1HG44 320 aa23.37■■□□□ 1.33
SCARB2-212ENST00000638663 ARID3AQ99856 593 aa23.37■■□□□ 1.33
SCARB2-212ENST00000638663 AGPAT1Q99943 283 aa23.37■■□□□ 1.33
SCARB2-212ENST00000638663 APOBEC3GQ9HC16 384 aaKnown RBP23.37■■□□□ 1.33
SCARB2-212ENST00000638663 SEPT11Q9NVA2 429 aaKnown RBP23.37■■□□□ 1.33
SCARB2-212ENST00000638663 A0A1B0GUA9 196 aa23.36■■□□□ 1.33
SCARB2-212ENST00000638663 GNAT1P11488 350 aa23.36■■□□□ 1.33
SCARB2-212ENST00000638663 ENOSF1Q7L5Y1 443 aa23.36■■□□□ 1.33
SCARB2-212ENST00000638663 CATSPER4Q7RTX7 472 aa23.36■■□□□ 1.33
SCARB2-212ENST00000638663 TRAPPC11Q7Z392 1133 aa23.36■■□□□ 1.33
SCARB2-212ENST00000638663 EFCAB13Q8IY85 973 aa23.36■■□□□ 1.33
SCARB2-212ENST00000638663 XPNPEP3Q9NQH7 507 aa23.36■■□□□ 1.33
SCARB2-212ENST00000638663 CAPN6Q9Y6Q1 641 aa23.36■■□□□ 1.33
SCARB2-212ENST00000638663 B4GALT4O60513 344 aa23.35■■□□□ 1.33
SCARB2-212ENST00000638663 SLU7O95391 586 aaKnown RBP23.35■■□□□ 1.33
SCARB2-212ENST00000638663 MYCNP04198 464 aaPredicted RBP23.35■■□□□ 1.33
SCARB2-212ENST00000638663 CLTAP09496 248 aa23.35■■□□□ 1.33
SCARB2-212ENST00000638663 HOXC8P31273 242 aa23.35■■□□□ 1.33
SCARB2-212ENST00000638663 ACP6Q9NPH0 428 aa23.35■■□□□ 1.33
SCARB2-212ENST00000638663 MRFAP1Q9Y605 127 aa23.35■■□□□ 1.33
SCARB2-212ENST00000638663 ENC1O14682 589 aa23.35■■□□□ 1.33
SCARB2-212ENST00000638663 BUB1O43683 1085 aa23.35■■□□□ 1.33
SCARB2-212ENST00000638663 TACC1O75410 805 aa23.35■■□□□ 1.33
SCARB2-212ENST00000638663 IL18RAPO95256 599 aa23.35■■□□□ 1.33
SCARB2-212ENST00000638663 CST3P01034 146 aaPredicted RBP23.35■■□□□ 1.33
SCARB2-212ENST00000638663 TMEM191BP0C7N4 346 aa23.35■■□□□ 1.33
SCARB2-212ENST00000638663 DARSP14868 501 aaKnown RBP23.35■■□□□ 1.33
SCARB2-212ENST00000638663 HOXD10P28358 340 aa23.35■■□□□ 1.33
SCARB2-212ENST00000638663 MAP2K2P36507 400 aa23.35■■□□□ 1.33
SCARB2-212ENST00000638663 HTRA3P83110 453 aa23.35■■□□□ 1.33
SCARB2-212ENST00000638663 SLC47A2Q86VL8 602 aa23.35■■□□□ 1.33
SCARB2-212ENST00000638663 TSC1Q92574 1164 aa23.35■■□□□ 1.33
SCARB2-212ENST00000638663 FAM81BQ96LP2 452 aa23.35■■□□□ 1.33
SCARB2-212ENST00000638663 ADPGKQ9BRR6 497 aa23.35■■□□□ 1.33
SCARB2-212ENST00000638663 TMCO5BA8MYB1 307 aa23.34■■□□□ 1.33
SCARB2-212ENST00000638663 ADAMTS4O75173 837 aa23.34■■□□□ 1.33
SCARB2-212ENST00000638663 KRT5P13647 590 aa23.34■■□□□ 1.33
SCARB2-212ENST00000638663 NAP1L1P55209 391 aaKnown RBP23.34■■□□□ 1.33
SCARB2-212ENST00000638663 NOP14P78316 857 aaKnown RBP23.34■■□□□ 1.33
SCARB2-212ENST00000638663 NBPF20Q3BBV1 942 aa23.34■■□□□ 1.33
SCARB2-212ENST00000638663 NOP9Q86U38 636 aaKnown RBP23.34■■□□□ 1.33
SCARB2-212ENST00000638663 PALB2Q86YC2 1186 aa23.34■■□□□ 1.33
SCARB2-212ENST00000638663 RPUSD2Q8IZ73 545 aaKnown RBP23.34■■□□□ 1.33
SCARB2-212ENST00000638663 TRIM58Q8NG06 486 aa23.34■■□□□ 1.33
SCARB2-212ENST00000638663 EPS8L1Q8TE68 723 aa23.34■■□□□ 1.33
SCARB2-212ENST00000638663 NUB1Q9Y5A7 615 aa23.34■■□□□ 1.33
SCARB2-212ENST00000638663 LACTBL1A8MY62 500 aa23.33■■□□□ 1.33
SCARB2-212ENST00000638663 MEFVO15553 781 aaPredicted RBP23.33■■□□□ 1.33
SCARB2-212ENST00000638663 HOXA11P31270 313 aaPredicted RBP23.33■■□□□ 1.33
SCARB2-212ENST00000638663 TAF3Q5VWG9 929 aa23.33■■□□□ 1.33
SCARB2-212ENST00000638663 ANKRD36BP1Q96IX9 119 aa23.33■■□□□ 1.33
SCARB2-212ENST00000638663 NOX5Q96PH1 765 aa23.33■■□□□ 1.33
SCARB2-212ENST00000638663 IMPG2Q9BZV3 1241 aa23.33■■□□□ 1.33
SCARB2-212ENST00000638663 NOCTQ9UK39 431 aaKnown RBP23.33■■□□□ 1.33
SCARB2-212ENST00000638663 UMODL1Q5DID0 1318 aa23.33■■□□□ 1.33
SCARB2-212ENST00000638663 FAM170AA1A519 330 aa23.33■■□□□ 1.32
SCARB2-212ENST00000638663 TNNC2P02585 160 aa23.33■■□□□ 1.32
SCARB2-212ENST00000638663 ATP1A1P05023 1023 aaKnown RBP23.33■■□□□ 1.32
SCARB2-212ENST00000638663 H2AFZP0C0S5 128 aa23.33■■□□□ 1.32
SCARB2-212ENST00000638663 EIF4BP23588 611 aaKnown RBP23.33■■□□□ 1.32
SCARB2-212ENST00000638663 NCBP1Q09161 790 aaKnown RBP23.33■■□□□ 1.32
SCARB2-212ENST00000638663 CUL2Q13617 745 aa23.33■■□□□ 1.32
SCARB2-212ENST00000638663 H2AFVQ71UI9 128 aa23.33■■□□□ 1.32
SCARB2-212ENST00000638663 RNF10Q8N5U6 811 aaKnown RBP23.33■■□□□ 1.32
SCARB2-212ENST00000638663 TMEM40Q8WWA1 233 aa23.33■■□□□ 1.32
SCARB2-212ENST00000638663 CENPFP49454 3210 aa23.32■■□□□ 1.32
SCARB2-212ENST00000638663 ANK1P16157 1881 aa23.32■■□□□ 1.32
SCARB2-212ENST00000638663 CTIFO43310 598 aaKnown RBP23.32■■□□□ 1.32
SCARB2-212ENST00000638663 NFICP08651 508 aa23.32■■□□□ 1.32
SCARB2-212ENST00000638663 YY1P25490 414 aa23.32■■□□□ 1.32
SCARB2-212ENST00000638663 MYL6P60660 151 aa23.32■■□□□ 1.32
SCARB2-212ENST00000638663 NKX3-2P78367 333 aa23.32■■□□□ 1.32
SCARB2-212ENST00000638663 TRPC3Q13507 836 aa23.32■■□□□ 1.32
SCARB2-212ENST00000638663 SNX17Q15036 470 aa23.32■■□□□ 1.32
SCARB2-212ENST00000638663 KYAT1Q16773 422 aa23.32■■□□□ 1.32
SCARB2-212ENST00000638663 LRRN4CLQ8ND94 238 aa23.32■■□□□ 1.32
SCARB2-212ENST00000638663 ALS2CR12Q96Q35 445 aa23.32■■□□□ 1.32
SCARB2-212ENST00000638663 TAS2R14Q9NYV8 317 aa23.32■■□□□ 1.32
SCARB2-212ENST00000638663 NPTXRO95502 500 aa23.31■■□□□ 1.32
SCARB2-212ENST00000638663 ASS1P00966 412 aaKnown RBP23.31■■□□□ 1.32
SCARB2-212ENST00000638663 HMGCRP04035 888 aa23.31■■□□□ 1.32
SCARB2-212ENST00000638663 CYP11B1P15538 503 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms