RNA–Protein interactions for RNA: ENST00000638099.1

GABRB3-225, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 2,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-225ENST00000638099 FAN1Q9Y2M0 1017 aa8.47□□□□□ -1.05
GABRB3-225ENST00000638099 PCDHB4Q9Y5E5 795 aa8.47□□□□□ -1.05
GABRB3-225ENST00000638099 CNTNAP2Q9UHC6 1331 aa8.47□□□□□ -1.05
GABRB3-225ENST00000638099 A0A087WZ62 844 aa8.47□□□□□ -1.05
GABRB3-225ENST00000638099 TCRBV7S2A1N4TA0A589 114 aa8.47□□□□□ -1.05
GABRB3-225ENST00000638099 BTNL10A8MVZ5 291 aa8.47□□□□□ -1.05
GABRB3-225ENST00000638099 DDX3YO15523 660 aaKnown RBP8.47□□□□□ -1.05
GABRB3-225ENST00000638099 WEE2P0C1S8 567 aa8.47□□□□□ -1.05
GABRB3-225ENST00000638099 COMTP21964 271 aa8.47□□□□□ -1.05
GABRB3-225ENST00000638099 GJC1P36383 396 aa8.47□□□□□ -1.05
GABRB3-225ENST00000638099 MYL6P60660 151 aa8.47□□□□□ -1.05
GABRB3-225ENST00000638099 SNRPFP62306 86 aaKnown RBP8.47□□□□□ -1.05
GABRB3-225ENST00000638099 GPC5P78333 572 aa8.47□□□□□ -1.05
GABRB3-225ENST00000638099 ARHGAP1Q07960 439 aa8.47□□□□□ -1.05
GABRB3-225ENST00000638099 WDR44Q5JSH3 913 aa8.47□□□□□ -1.05
GABRB3-225ENST00000638099 TAPT1Q6NXT6 567 aa8.47□□□□□ -1.05
GABRB3-225ENST00000638099 C15orf39Q6ZRI6 1047 aa8.47□□□□□ -1.05
GABRB3-225ENST00000638099 SLFN11Q7Z7L1 901 aa8.47□□□□□ -1.05
GABRB3-225ENST00000638099 AFAP1L1Q8TED9 768 aa8.47□□□□□ -1.05
GABRB3-225ENST00000638099 HES6Q96HZ4 224 aa8.47□□□□□ -1.05
GABRB3-225ENST00000638099 ACO2Q99798 780 aaKnown RBP8.47□□□□□ -1.05
GABRB3-225ENST00000638099 FDXACB1Q9BRP7 624 aaPredicted RBP8.47□□□□□ -1.05
GABRB3-225ENST00000638099 TRIM51Q9BSJ1 452 aa8.47□□□□□ -1.05
GABRB3-225ENST00000638099 MROH8Q9H579 483 aa8.47□□□□□ -1.05
GABRB3-225ENST00000638099 TSKSQ9UJT2 592 aa8.47□□□□□ -1.05
GABRB3-225ENST00000638099 NCANO14594 1321 aa8.47□□□□□ -1.05
GABRB3-225ENST00000638099 O00370 1275 aa8.46□□□□□ -1.05
GABRB3-225ENST00000638099 TTI1O43156 1089 aa8.46□□□□□ -1.05
GABRB3-225ENST00000638099 GRIN3BO60391 1043 aa8.46□□□□□ -1.05
GABRB3-225ENST00000638099 RTN2O75298 545 aa8.46□□□□□ -1.05
GABRB3-225ENST00000638099 LGALS2P05162 132 aa8.46□□□□□ -1.05
GABRB3-225ENST00000638099 KRT19P08727 400 aa8.46□□□□□ -1.05
GABRB3-225ENST00000638099 CXCL8P10145 99 aa8.46□□□□□ -1.05
GABRB3-225ENST00000638099 GGCXP38435 758 aa8.46□□□□□ -1.05
GABRB3-225ENST00000638099 RFC5P40937 340 aa8.46□□□□□ -1.05
GABRB3-225ENST00000638099 RAP1GAPP47736 663 aa8.46□□□□□ -1.05
GABRB3-225ENST00000638099 NOP14P78316 857 aaKnown RBP8.46□□□□□ -1.05
GABRB3-225ENST00000638099 CDR2Q01850 454 aa8.46□□□□□ -1.05
GABRB3-225ENST00000638099 NCOA4Q13772 614 aa8.46□□□□□ -1.05
GABRB3-225ENST00000638099 MAPK6Q16659 721 aa8.46□□□□□ -1.05
GABRB3-225ENST00000638099 IFI16Q16666 785 aaKnown RBP8.46□□□□□ -1.05
GABRB3-225ENST00000638099 CCDC70Q6NSX1 233 aa8.46□□□□□ -1.05
GABRB3-225ENST00000638099 MAMDC4Q6UXC1 1216 aa8.46□□□□□ -1.05
GABRB3-225ENST00000638099 ZNF564Q8TBZ8 553 aaPredicted RBP8.46□□□□□ -1.05
GABRB3-225ENST00000638099 ISCUQ9H1K1 167 aa8.46□□□□□ -1.05
GABRB3-225ENST00000638099 CXCL16Q9H2A7 254 aa8.46□□□□□ -1.05
GABRB3-225ENST00000638099 DPH5Q9H2P9 285 aa8.46□□□□□ -1.05
GABRB3-225ENST00000638099 HPCAL4Q9UM19 191 aa8.46□□□□□ -1.05
GABRB3-225ENST00000638099 AKT3Q9Y243 479 aa8.46□□□□□ -1.05
GABRB3-225ENST00000638099 IVNS1ABPQ9Y6Y0 642 aa8.46□□□□□ -1.05
GABRB3-225ENST00000638099 ADGRA2Q96PE1 1338 aa8.46□□□□□ -1.05
GABRB3-225ENST00000638099 PLXNA1Q9UIW2 1896 aa8.46□□□□□ -1.06
GABRB3-225ENST00000638099 TARSL2A2RTX5 802 aaKnown RBP8.46□□□□□ -1.06
GABRB3-225ENST00000638099 IQCA1LA6NCM1 817 aa8.46□□□□□ -1.06
GABRB3-225ENST00000638099 PGRMC1O00264 195 aaKnown RBP8.46□□□□□ -1.06
GABRB3-225ENST00000638099 SART1O43290 800 aaKnown RBP8.46□□□□□ -1.06
GABRB3-225ENST00000638099 SNAI1O95863 264 aaPredicted RBP8.46□□□□□ -1.06
GABRB3-225ENST00000638099 RFX1P22670 979 aa8.46□□□□□ -1.06
GABRB3-225ENST00000638099 RRM1P23921 792 aa8.46□□□□□ -1.06
GABRB3-225ENST00000638099 GRM1Q13255 1194 aa8.46□□□□□ -1.06
GABRB3-225ENST00000638099 HLTFQ14527 1009 aaKnown RBP eCLIP8.46□□□□□ -1.06
GABRB3-225ENST00000638099 TERF2Q15554 542 aa8.46□□□□□ -1.06
GABRB3-225ENST00000638099 ZNF568Q3ZCX4 644 aa8.46□□□□□ -1.06
GABRB3-225ENST00000638099 ZNF771Q7L3S4 317 aaPredicted RBP8.46□□□□□ -1.06
GABRB3-225ENST00000638099 ZNF572Q7Z3I7 529 aaPredicted RBP8.46□□□□□ -1.06
GABRB3-225ENST00000638099 EFCAB13Q8IY85 973 aa8.46□□□□□ -1.06
GABRB3-225ENST00000638099 SCFD2Q8WU76 684 aa8.46□□□□□ -1.06
GABRB3-225ENST00000638099 TMEM174Q8WUU8 243 aa8.46□□□□□ -1.06
GABRB3-225ENST00000638099 RNPC3Q96LT9 517 aaKnown RBP8.46□□□□□ -1.06
GABRB3-225ENST00000638099 SCLT1Q96NL6 688 aa8.46□□□□□ -1.06
GABRB3-225ENST00000638099 FAM118BQ9BPY3 351 aa8.46□□□□□ -1.06
GABRB3-225ENST00000638099 C11orf70Q9BRQ4 267 aa8.46□□□□□ -1.06
GABRB3-225ENST00000638099 GBA2Q9HCG7 927 aaPredicted RBP8.46□□□□□ -1.06
GABRB3-225ENST00000638099 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.46□□□□□ -1.06
GABRB3-225ENST00000638099 NXF1Q9UBU9 619 aaKnown RBP8.46□□□□□ -1.06
GABRB3-225ENST00000638099 CNOT8Q9UFF9 292 aaKnown RBP8.46□□□□□ -1.06
GABRB3-225ENST00000638099 A0A0A6YYK5 440 aaPredicted RBP8.45□□□□□ -1.06
GABRB3-225ENST00000638099 FAM189A1O60320 539 aa8.45□□□□□ -1.06
GABRB3-225ENST00000638099 LGR5O75473 907 aa8.45□□□□□ -1.06
GABRB3-225ENST00000638099 CUL2Q13617 745 aa8.45□□□□□ -1.06
GABRB3-225ENST00000638099 SKIDA1Q1XH10 827 aa8.45□□□□□ -1.06
GABRB3-225ENST00000638099 ZNF792Q3KQV3 632 aa8.45□□□□□ -1.06
GABRB3-225ENST00000638099 IER5Q5VY09 327 aa8.45□□□□□ -1.06
GABRB3-225ENST00000638099 GPR142Q7Z601 462 aa8.45□□□□□ -1.06
GABRB3-225ENST00000638099 USP37Q86T82 979 aa8.45□□□□□ -1.06
GABRB3-225ENST00000638099 ZBTB8OSQ8IWT0 167 aa8.45□□□□□ -1.06
GABRB3-225ENST00000638099 ZDHHC14Q8IZN3 488 aa8.45□□□□□ -1.06
GABRB3-225ENST00000638099 NPLOC4Q8TAT6 608 aa8.45□□□□□ -1.06
GABRB3-225ENST00000638099 AENQ8WTP8 325 aaKnown RBP8.45□□□□□ -1.06
GABRB3-225ENST00000638099 LMBR1Q8WVP7 490 aa8.45□□□□□ -1.06
GABRB3-225ENST00000638099 MPHOSPH6Q99547 160 aaKnown RBP8.45□□□□□ -1.06
GABRB3-225ENST00000638099 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.45□□□□□ -1.06
GABRB3-225ENST00000638099 MRPL4Q9BYD3 311 aaKnown RBP8.45□□□□□ -1.06
GABRB3-225ENST00000638099 UBXN6Q9BZV1 441 aa8.45□□□□□ -1.06
GABRB3-225ENST00000638099 CCDC113Q9H0I3 377 aa8.45□□□□□ -1.06
GABRB3-225ENST00000638099 FAM49AQ9H0Q0 323 aaPredicted RBP8.45□□□□□ -1.06
GABRB3-225ENST00000638099 NEUROG2Q9H2A3 272 aa8.45□□□□□ -1.06
GABRB3-225ENST00000638099 SMARCAD1Q9H4L7 1026 aa8.45□□□□□ -1.06
GABRB3-225ENST00000638099 KCNG1Q9UIX4 513 aa8.45□□□□□ -1.06
GABRB3-225ENST00000638099 INTUQ9ULD6 942 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms