RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 FAM167AQ96KS9 214 aa23.05■■□□□ 1.28
CLN6-224ENST00000638076 CGRRF1Q99675 332 aa23.05■■□□□ 1.28
CLN6-224ENST00000638076 GPR20Q99678 358 aa23.05■■□□□ 1.28
CLN6-224ENST00000638076 ZNFX1Q9P2E3 1918 aaKnown RBP23.05■■□□□ 1.28
CLN6-224ENST00000638076 CNTNAP2Q9UHC6 1331 aa23.05■■□□□ 1.28
CLN6-224ENST00000638076 TTLL13PA6NNM8 815 aa23.05■■□□□ 1.28
CLN6-224ENST00000638076 KRT14P02533 472 aa23.05■■□□□ 1.28
CLN6-224ENST00000638076 UNGP13051 313 aaPredicted RBP23.05■■□□□ 1.28
CLN6-224ENST00000638076 PPP2R5EQ16537 467 aa23.05■■□□□ 1.28
CLN6-224ENST00000638076 BBXQ8WY36 941 aaPredicted RBP23.05■■□□□ 1.28
CLN6-224ENST00000638076 SEC14L1Q92503 715 aa23.05■■□□□ 1.28
CLN6-224ENST00000638076 ARL8AQ96BM9 186 aa23.05■■□□□ 1.28
CLN6-224ENST00000638076 APOBEC3GQ9HC16 384 aaKnown RBP23.05■■□□□ 1.28
CLN6-224ENST00000638076 LRRC37A2A6NM11 1700 aa23.05■■□□□ 1.28
CLN6-224ENST00000638076 NOP56O00567 594 aaKnown RBP23.04■■□□□ 1.28
CLN6-224ENST00000638076 ACTN2P35609 894 aa23.04■■□□□ 1.28
CLN6-224ENST00000638076 TTMPQ5BVD1 217 aa23.04■■□□□ 1.28
CLN6-224ENST00000638076 TRIM51Q9BSJ1 452 aa23.04■■□□□ 1.28
CLN6-224ENST00000638076 CLDN3O15551 220 aa23.04■■□□□ 1.28
CLN6-224ENST00000638076 DR1Q01658 176 aa23.04■■□□□ 1.28
CLN6-224ENST00000638076 PPIL2Q13356 520 aa23.04■■□□□ 1.28
CLN6-224ENST00000638076 KCTD2Q14681 263 aa23.04■■□□□ 1.28
CLN6-224ENST00000638076 CELF3Q5SZQ8 465 aaKnown RBP23.04■■□□□ 1.28
CLN6-224ENST00000638076 SEL1L2Q5TEA6 688 aa23.04■■□□□ 1.28
CLN6-224ENST00000638076 ZNF677Q86XU0 584 aa23.04■■□□□ 1.28
CLN6-224ENST00000638076 OR5B17Q8NGF7 314 aa23.04■■□□□ 1.28
CLN6-224ENST00000638076 OPTNQ96CV9 577 aa23.04■■□□□ 1.28
CLN6-224ENST00000638076 MMP19Q99542 508 aa23.04■■□□□ 1.28
CLN6-224ENST00000638076 DPH5Q9H2P9 285 aa23.04■■□□□ 1.28
CLN6-224ENST00000638076 CTNNA1P35221 906 aaKnown RBP23.03■■□□□ 1.28
CLN6-224ENST00000638076 BPIFB4P59827 614 aa23.03■■□□□ 1.28
CLN6-224ENST00000638076 CUL2Q13617 745 aa23.03■■□□□ 1.28
CLN6-224ENST00000638076 MOGSQ13724 837 aa23.03■■□□□ 1.28
CLN6-224ENST00000638076 WDR78Q5VTH9 848 aa23.03■■□□□ 1.28
CLN6-224ENST00000638076 IER5Q5VY09 327 aa23.03■■□□□ 1.28
CLN6-224ENST00000638076 KCNV1Q6PIU1 500 aa23.03■■□□□ 1.28
CLN6-224ENST00000638076 CPA5Q8WXQ8 436 aa23.03■■□□□ 1.28
CLN6-224ENST00000638076 SPON1Q9HCB6 807 aa23.03■■□□□ 1.28
CLN6-224ENST00000638076 PPME1Q9Y570 386 aa23.03■■□□□ 1.28
CLN6-224ENST00000638076 SRGAP2CP0DJJ0 459 aa23.03■■□□□ 1.28
CLN6-224ENST00000638076 PYGMP11217 842 aa23.03■■□□□ 1.28
CLN6-224ENST00000638076 ACO1P21399 889 aaKnown RBP23.03■■□□□ 1.28
CLN6-224ENST00000638076 EFNA5P52803 228 aa23.03■■□□□ 1.28
CLN6-224ENST00000638076 MKRN4PQ13434 485 aaPredicted RBP23.03■■□□□ 1.28
CLN6-224ENST00000638076 LEKR1Q6ZMV7 388 aa23.03■■□□□ 1.28
CLN6-224ENST00000638076 FBXO16Q8IX29 292 aaPredicted RBP23.03■■□□□ 1.28
CLN6-224ENST00000638076 MCOLN2Q8IZK6 566 aa23.03■■□□□ 1.28
CLN6-224ENST00000638076 LRRC71Q8N4P6 559 aa23.03■■□□□ 1.28
CLN6-224ENST00000638076 FAM114A2Q9NRY5 505 aa23.03■■□□□ 1.28
CLN6-224ENST00000638076 MSCO60682 206 aa23.02■■□□□ 1.28
CLN6-224ENST00000638076 TNFSF9P41273 254 aa23.02■■□□□ 1.28
CLN6-224ENST00000638076 ZSCAN26Q16670 478 aa23.02■■□□□ 1.28
CLN6-224ENST00000638076 ZPBP2Q6X784 338 aa23.02■■□□□ 1.28
CLN6-224ENST00000638076 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.02■■□□□ 1.28
CLN6-224ENST00000638076 ZBTB33Q86T24 672 aa23.02■■□□□ 1.28
CLN6-224ENST00000638076 TRIM31Q9BZY9 425 aa23.02■■□□□ 1.28
CLN6-224ENST00000638076 RAB17Q9H0T7 212 aa23.02■■□□□ 1.28
CLN6-224ENST00000638076 PCDHA3Q9Y5H8 950 aa23.02■■□□□ 1.28
CLN6-224ENST00000638076 DNAJC25-GNG10A0A024R161 153 aa23.02■■□□□ 1.28
CLN6-224ENST00000638076 ZBTB42B2RXF5 422 aa23.02■■□□□ 1.28
CLN6-224ENST00000638076 LGR5O75473 907 aa23.02■■□□□ 1.28
CLN6-224ENST00000638076 OSBPP22059 807 aa23.02■■□□□ 1.28
CLN6-224ENST00000638076 HNRNPH2P55795 449 aaKnown RBP23.02■■□□□ 1.28
CLN6-224ENST00000638076 LAMTOR4Q0VGL1 99 aa23.02■■□□□ 1.28
CLN6-224ENST00000638076 C9orf131Q5VYM1 1079 aa23.02■■□□□ 1.28
CLN6-224ENST00000638076 LRRC45Q96CN5 670 aa23.02■■□□□ 1.28
CLN6-224ENST00000638076 SPATA33Q96N06 139 aa23.02■■□□□ 1.28
CLN6-224ENST00000638076 TCHPQ9BT92 498 aa23.02■■□□□ 1.28
CLN6-224ENST00000638076 MRPL4Q9BYD3 311 aaKnown RBP23.02■■□□□ 1.28
CLN6-224ENST00000638076 CCDC113Q9H0I3 377 aa23.02■■□□□ 1.28
CLN6-224ENST00000638076 PCDHB4Q9Y5E5 795 aa23.02■■□□□ 1.28
CLN6-224ENST00000638076 HSPA6P17066 643 aa23.01■■□□□ 1.27
CLN6-224ENST00000638076 CTNNA2P26232 953 aa23.01■■□□□ 1.27
CLN6-224ENST00000638076 FLT3P36888 993 aa23.01■■□□□ 1.27
CLN6-224ENST00000638076 HSD17B3P37058 310 aa23.01■■□□□ 1.27
CLN6-224ENST00000638076 NOP14P78316 857 aaKnown RBP23.01■■□□□ 1.27
CLN6-224ENST00000638076 TMEM270Q6UE05 265 aa23.01■■□□□ 1.27
CLN6-224ENST00000638076 CD302Q8IX05 232 aa23.01■■□□□ 1.27
CLN6-224ENST00000638076 RNF149Q8NC42 400 aa23.01■■□□□ 1.27
CLN6-224ENST00000638076 ATP8B4Q8TF62 1192 aa23.01■■□□□ 1.27
CLN6-224ENST00000638076 TCP11Q8WWU5 503 aa23.01■■□□□ 1.27
CLN6-224ENST00000638076 ANAPC7Q9UJX3 599 aa23.01■■□□□ 1.27
CLN6-224ENST00000638076 PLAAQ9Y263 795 aa23.01■■□□□ 1.27
CLN6-224ENST00000638076 UMODL1Q5DID0 1318 aa23.01■■□□□ 1.27
CLN6-224ENST00000638076 PHF2O75151 1096 aa23■■□□□ 1.27
CLN6-224ENST00000638076 TOM1L1O75674 476 aa23■■□□□ 1.27
CLN6-224ENST00000638076 CLTAP09496 248 aa23■■□□□ 1.27
CLN6-224ENST00000638076 NCOA4Q13772 614 aa23■■□□□ 1.27
CLN6-224ENST00000638076 CDCA2Q69YH5 1023 aaPredicted RBP23■■□□□ 1.27
CLN6-224ENST00000638076 FASTKD5Q7L8L6 764 aaKnown RBP23■■□□□ 1.27
CLN6-224ENST00000638076 PLPPR4Q7Z2D5 763 aa23■■□□□ 1.27
CLN6-224ENST00000638076 BRSK2Q8IWQ3 736 aa23■■□□□ 1.27
CLN6-224ENST00000638076 DHX37Q8IY37 1157 aaKnown RBP23■■□□□ 1.27
CLN6-224ENST00000638076 PRELID2Q8N945 189 aa23■■□□□ 1.27
CLN6-224ENST00000638076 COPS5Q92905 334 aa23■■□□□ 1.27
CLN6-224ENST00000638076 C18orf8Q96DM3 657 aa23■■□□□ 1.27
CLN6-224ENST00000638076 CYFIP2Q96F07 1278 aa23■■□□□ 1.27
CLN6-224ENST00000638076 NUB1Q9Y5A7 615 aa23■■□□□ 1.27
CLN6-224ENST00000638076 CYP1A1P04798 512 aaPredicted RBP23■■□□□ 1.27
CLN6-224ENST00000638076 MAPK4P31152 587 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms