RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 RWDD2AQ9UIY3 292 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 FBXO10Q9UK96 956 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 PNMA6FA0A0J9YX94 578 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 IPO5O00410 1097 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 ENDOD1O94919 500 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 ENO1P06733 434 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 USP39Q53GS9 565 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 LRRC71Q8N4P6 559 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 SLC25A41Q8N5S1 370 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 RSPH9Q9H1X1 276 aaPredicted RBP17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 CDC23Q9UJX2 597 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 SLC39A10Q9ULF5 831 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 SULT1E1P49888 294 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 ANKMY2Q8IV38 441 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 CCDC103Q8IW40 242 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 PABPC5Q96DU9 382 aaKnown RBP17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 PEX1O43933 1283 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 CDC25BP30305 580 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 ALCAMQ13740 583 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 FAM160B2Q86V87 743 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 CCDC60Q8IWA6 550 aaPredicted RBP17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 ASNSD1Q9NWL6 643 aa17.17■□□□□ 0.34
CACNA1A-258ENST00000638029 CCDC85CA6NKD9 419 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 SERPINB10P48595 397 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 EN1Q05925 392 aaPredicted RBP17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 ELMO2Q96JJ3 720 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 RALBP11234 206 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 BRAFP15056 766 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 TOGARAM2Q6ZUX3 1019 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 RABGGTAQ92696 567 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 CNOT10Q9H9A5 744 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 DGKIO75912 1065 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 MMEP08473 750 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 ADD2P35612 726 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 RAD23BP54727 409 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 RAB14P61106 215 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 TNFAIP2Q03169 654 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 CNGA3Q16281 694 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 KRT84Q9NSB2 600 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 POLG2Q9UHN1 485 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 CCDC151A5D8V7 595 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 LDHAP00338 332 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 DNAJB2P25686 324 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 ARHGAP15Q53QZ3 475 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 PTRHD1Q6GMV3 140 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 STKLD1Q8NE28 680 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 SSH3Q8TE77 659 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 PUS3Q9BZE2 481 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 FAM129AQ9BZQ8 928 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 EML4Q9HC35 981 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 PLAAQ9Y263 795 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 SESN1Q9Y6P5 492 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 NDUFS3O75489 264 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 TAF1CQ15572 869 aaPredicted RBP17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 C11orf88Q6PI97 169 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 CCDC3Q9BQI4 270 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 GPR63Q9BZJ6 419 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 KLHL25Q9H0H3 589 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 RAB23Q9ULC3 237 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 MMP1P03956 469 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 CENPPQ6IPU0 288 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 TRIM62Q9BVG3 475 aa17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 NUP153P49790 1475 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-258ENST00000638029 DYRK3O43781 588 aa17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 GTF2E2P29084 291 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 ZRANB3Q5FWF4 1079 aa17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 EFHC2Q5JST6 749 aa17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 FAM102AQ5T9C2 384 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 FAM135BQ49AJ0 1406 aa17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 TNNI3P19429 210 aa17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 APOA5Q6Q788 366 aa17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 MRPS26Q9BYN8 205 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 IL10P22301 178 aa17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 CDR2LQ86X02 465 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 THAP11Q96EK4 314 aa17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 SLC16A4O15374 487 aa17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 KRT20P35900 424 aa17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 IL6STP40189 918 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 GPSM2P81274 684 aa17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 GUCY1A3Q02108 690 aa17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 TP53BP2Q13625 1128 aa17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 NFIL3Q16649 462 aa17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 SERPINB3P29508 390 aa17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 CLYBLQ8N0X4 340 aa17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 PYCARDQ9ULZ3 195 aa17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 SYNCRIPO60506 623 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 GUCY1A2P33402 732 aa17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 KDSRQ06136 332 aa17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 ZSCAN18Q8TBC5 510 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 DTX3LQ8TDB6 740 aa17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 CLMNQ96JQ2 1002 aa17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 EPN3Q9H201 632 aa17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 BAZ2BQ9UIF8 2168 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-258ENST00000638029 EIF4A3P38919 411 aaKnown RBP17.14■□□□□ 0.34
CACNA1A-258ENST00000638029 VPS50Q96JG6 964 aa17.14■□□□□ 0.34
CACNA1A-258ENST00000638029 PCDH8O95206 1070 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 FGFR1P11362 822 aa17.14■□□□□ 0.33
CACNA1A-258ENST00000638029 SH3TC2Q8TF17 1288 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms