RNA–Protein interactions for RNA: ENST00000637832.1

CACNA1A-252, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 701 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-252ENST00000637832 CGRRF1Q99675 332 aa13.18□□□□□ -0.3
CACNA1A-252ENST00000637832 PDE11AQ9HCR9 933 aa13.18□□□□□ -0.3
CACNA1A-252ENST00000637832 FANCLQ9NW38 375 aa13.18□□□□□ -0.3
CACNA1A-252ENST00000637832 UBQLN1Q9UMX0 589 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-252ENST00000637832 INSL6Q9Y581 213 aa13.18□□□□□ -0.3
CACNA1A-252ENST00000637832 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.18□□□□□ -0.3
CACNA1A-252ENST00000637832 FNDC1Q4ZHG4 1894 aaPredicted RBP13.18□□□□□ -0.3
CACNA1A-252ENST00000637832 SMIM28A0A1B0GU29 152 aa13.17□□□□□ -0.3
CACNA1A-252ENST00000637832 N4BP1O75113 896 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-252ENST00000637832 POMCP01189 267 aa13.17□□□□□ -0.3
CACNA1A-252ENST00000637832 PRKCSHP14314 528 aaPredicted RBP13.17□□□□□ -0.3
CACNA1A-252ENST00000637832 TFAMQ00059 246 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-252ENST00000637832 CETN1Q12798 172 aa13.17□□□□□ -0.3
CACNA1A-252ENST00000637832 IQCB1Q15051 598 aa13.17□□□□□ -0.3
CACNA1A-252ENST00000637832 DUOXA2Q1HG44 320 aa13.17□□□□□ -0.3
CACNA1A-252ENST00000637832 PAN2Q504Q3 1202 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-252ENST00000637832 XKR4Q5GH76 650 aa13.17□□□□□ -0.3
CACNA1A-252ENST00000637832 GLRA4Q5JXX5 417 aa13.17□□□□□ -0.3
CACNA1A-252ENST00000637832 JADE1Q6IE81 842 aa13.17□□□□□ -0.3
CACNA1A-252ENST00000637832 ALKAL1Q6UXT8 129 aa13.17□□□□□ -0.3
CACNA1A-252ENST00000637832 CHRDL2Q6WN34 429 aa13.17□□□□□ -0.3
CACNA1A-252ENST00000637832 LUZP1Q86V48 1076 aa13.17□□□□□ -0.3
CACNA1A-252ENST00000637832 DHX40Q8IX18 779 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-252ENST00000637832 PARD3BQ8TEW8 1205 aa13.17□□□□□ -0.3
CACNA1A-252ENST00000637832 RAD9AQ99638 391 aa13.17□□□□□ -0.3
CACNA1A-252ENST00000637832 SAMSN1Q9NSI8 373 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-252ENST00000637832 COL4A6Q14031 1691 aa13.17□□□□□ -0.3
CACNA1A-252ENST00000637832 MKI67P46013 3256 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-252ENST00000637832 TRIP11Q15643 1979 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 A0A1W2PPC1 479 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 PTGESO14684 152 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 PHACTR2O75167 634 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 NFICP08651 508 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 CYP3A5P20815 502 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 GTF2H1P32780 548 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 HTRA4P83105 476 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 TUSC3Q13454 348 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 BIRC3Q13489 604 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 NCAPHQ15003 741 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 MAN2A1Q16706 1144 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 HSP90AA4PQ58FG1 418 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 TCP11X2Q5H9J9 407 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 SPOUT1Q5T280 376 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 CDKAL1Q5VV42 579 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 TRIM59Q8IWR1 403 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 FIBCD1Q8N539 461 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 RNF214Q8ND24 703 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 UROC1Q96N76 676 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 CASD1Q96PB1 797 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 PPP1R10Q96QC0 940 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 AAASQ9NRG9 546 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 RNF19AQ9NV58 838 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 TBC1D13Q9NVG8 400 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 INTS13Q9NVM9 706 aa13.16□□□□□ -0.3
CACNA1A-252ENST00000637832 PDE4DIPQ5VU43 2346 aa13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 LRRIQ3A6PVS8 624 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 RBAK-RBAKDNI3L0D1 243 aa13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 PES1O00541 588 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 CLSTN1O94985 981 aa13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 TRIM49P0CI25 452 aa13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 TRIM49CP0CI26 452 aa13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 GATMP50440 423 aa13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 MXI1P50539 228 aa13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 CLDN10P78369 228 aa13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 RAB30Q15771 203 aa13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 FILIP1LQ4L180 1135 aa13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 TMCO2Q7Z6W1 182 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 EFCAB13Q8IY85 973 aa13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 CCDC150Q8NCX0 1101 aa13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 ZNF689Q96CS4 500 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 DDX27Q96GQ7 796 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 BORCS6Q96GS4 357 aa13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 TUBGCP2Q9BSJ2 902 aa13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 IMPG2Q9BZV3 1241 aa13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 MTMR12Q9C0I1 747 aa13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 MMRN2Q9H8L6 949 aa13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 MSRAQ9UJ68 235 aa13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 ITGA11Q9UKX5 1188 aa13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 RWDD3Q9Y3V2 267 aa13.15□□□□□ -0.3
CACNA1A-252ENST00000637832 MEFVO15553 781 aaPredicted RBP13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 ZC3H11AO75152 810 aaKnown RBP eCLIP13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 SERPINC1P01008 464 aa13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 AFPP02771 609 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 TPM3P06753 285 aa13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 KRT19P08727 400 aa13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 LAG3P18627 525 aa13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 RPL9P32969 192 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 ALDH7A1P49419 539 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 MYL7Q01449 175 aa13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 TRPC3Q13507 836 aa13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 PRPF38BQ5VTL8 546 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 KRT39Q6A163 491 aa13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 IRF2BP1Q8IU81 584 aa13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 GSTCDQ8NEC7 633 aa13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 SLC35C1Q96A29 364 aa13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 ZNF560Q96MR9 790 aa13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 ZMAT2Q96NC0 199 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 TMEM175Q9BSA9 504 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms