RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 FNTAP49354 379 aa18.94■□□□□ 0.62
CACNA1A-247ENST00000637769 PIGHQ14442 188 aaPredicted RBP18.94■□□□□ 0.62
CACNA1A-247ENST00000637769 NLRP9Q7RTR0 991 aa18.94■□□□□ 0.62
CACNA1A-247ENST00000637769 TRIM63Q969Q1 353 aa18.94■□□□□ 0.62
CACNA1A-247ENST00000637769 SYNDIG1LA6NDD5 238 aa18.94■□□□□ 0.62
CACNA1A-247ENST00000637769 MEFVO15553 781 aaPredicted RBP18.94■□□□□ 0.62
CACNA1A-247ENST00000637769 TBL3Q12788 808 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-247ENST00000637769 C1DQ13901 141 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-247ENST00000637769 SLC27A3Q5K4L6 730 aa18.94■□□□□ 0.62
CACNA1A-247ENST00000637769 C11orf88Q6PI97 169 aa18.94■□□□□ 0.62
CACNA1A-247ENST00000637769 SPATA21Q7Z572 469 aa18.94■□□□□ 0.62
CACNA1A-247ENST00000637769 SAMSN1Q9NSI8 373 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-247ENST00000637769 PDP2Q9P2J9 529 aa18.94■□□□□ 0.62
CACNA1A-247ENST00000637769 UBE3AQ05086 875 aa18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 SFSWAPQ12872 951 aaKnown RBP18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 LRRC41Q15345 812 aa18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 ITGB1BP2Q9UKP3 347 aa18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 FAM47DPA6NHR8 397 aa18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 NDUFS3O75489 264 aa18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 HOXD10P28358 340 aa18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 KNOP1Q1ED39 458 aaKnown RBP18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 LRRC8DQ7L1W4 858 aa18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 CCDC126Q96EE4 140 aa18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 ZNF496Q96IT1 587 aaPredicted RBP18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 FAR2Q96K12 515 aa18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 TSEN34Q9BSV6 310 aaKnown RBP18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 VPS33BQ9H267 617 aa18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 APBA3O96018 575 aa18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 ARSEP51690 589 aa18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 FEM1BQ9UK73 627 aa18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 KCNH2Q12809 1159 aa18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 C11orf57Q6ZUT1 292 aaPredicted RBP18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 FOXP4Q8IVH2 680 aaPredicted RBP18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 MTRF1O75570 445 aaKnown RBP18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 RTL3Q8N8U3 475 aaKnown RBP18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 TBC1D12O60347 775 aa18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 JAK1P23458 1154 aa18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 ARHGAP27Q6ZUM4 889 aa18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 PTPRN2Q92932 1015 aa18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 COA7Q96BR5 231 aa18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 BBS2Q9BXC9 721 aa18.93■□□□□ 0.62
CACNA1A-247ENST00000637769 TPI1P60174 286 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 FAM102AQ5T9C2 384 aaPredicted RBP18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 TTC30AQ86WT1 665 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 YAF2Q8IY57 180 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 MTERF3Q96E29 417 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 UNC45AQ9H3U1 944 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 ZFYVE1Q9HBF4 777 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 DFFAO00273 331 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 LSM7Q9UK45 103 aaKnown RBP18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 USP15Q9Y4E8 981 aaPredicted RBP18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 DYRK3O43781 588 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 USP17L3A6NCW0 530 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 USP17L4A6NCW7 530 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 USP17L1Q7RTZ2 530 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 FRMD5Q7Z6J6 570 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 SNX24Q9Y343 169 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 TRPC5OSA6NMA1 111 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 ST8SIA6P61647 398 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 STX3Q13277 289 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 ZNF467Q7Z7K2 595 aaPredicted RBP18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 BHMT2Q9H2M3 363 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 MYO1GB0I1T2 1018 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 EFNA5P52803 228 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 HNRNPH2P55795 449 aaKnown RBP18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 CC2D1AQ6P1N0 951 aaPredicted RBP18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 LINC00523Q86TU6 105 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 RMND5BQ96G75 393 aaPredicted RBP18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 SH3GL1Q99961 368 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 EAF2Q96CJ1 260 aaPredicted RBP18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 LZTS1Q9Y250 596 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 PTCH1Q13635 1447 aa18.92■□□□□ 0.62
CACNA1A-247ENST00000637769 RTN2O75298 545 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 FKBP9O95302 570 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 FKBP9P1Q75LS8 142 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 MICU2Q8IYU8 434 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 C17orf80Q9BSJ5 609 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 USP21Q9UK80 565 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 PLA2G4AP47712 749 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 CDH6P55285 790 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 PTK6Q13882 451 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 FAM98CQ17RN3 349 aaKnown RBP18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 DDHD1Q8NEL9 900 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 SCFD2Q8WU76 684 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 REREQ9P2R6 1566 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 DNAJC10Q8IXB1 793 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 ARHGEF26Q96DR7 871 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 CCT7Q99832 543 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 MOV10L1Q9BXT6 1211 aaKnown RBP18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 PLEKHA5Q9HAU0 1116 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 STON1Q9Y6Q2 735 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 SMIM31A0A1B0GVY4 71 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 SNX17Q15036 470 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 FAM180AQ6UWF9 173 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 DNAJC7Q99615 494 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 ATP7BP35670 1465 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 ITSN1Q15811 1721 aa18.91■□□□□ 0.62
CACNA1A-247ENST00000637769 ZC3H4Q9UPT8 1303 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms