RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-225ENST00000636861 NUMBLQ9Y6R0 609 aa4.28□□□□□ -1.72
CHD2-225ENST00000636861 COL4A1P02462 1669 aa4.28□□□□□ -1.72
CHD2-225ENST00000636861 RALGAPA2Q2PPJ7 1873 aa4.28□□□□□ -1.72
CHD2-225ENST00000636861 GAKO14976 1311 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 ABCB11O95342 1321 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 DDX60Q8IY21 1712 aaKnown RBP4.27□□□□□ -1.73
CHD2-225ENST00000636861 MYH8P13535 1937 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 PCNX1Q96RV3 2341 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 MYO5AQ9Y4I1 1855 aaKnown RBP4.27□□□□□ -1.73
CHD2-225ENST00000636861 A0A087WWV3 80 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 PNMA6EA0A0J9YXQ4 647 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 SSU72P8A0A1W2PR75 194 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 SH3PXD2BA1X283 911 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 FAM187AA6NFU0 413 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 E9PBE3 544 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 F8W031 263 aaPredicted RBP4.27□□□□□ -1.73
CHD2-225ENST00000636861 F8W8V4 182 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 PGRMC1O00264 195 aaKnown RBP4.27□□□□□ -1.73
CHD2-225ENST00000636861 RASGRF2O14827 1237 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 FOXP2O15409 715 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 TEX33O43247 280 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 TLR2O60603 784 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 CCDC22O60826 627 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 SRGAP2O75044 1071 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 CNOT3O75175 753 aaKnown RBP4.27□□□□□ -1.73
CHD2-225ENST00000636861 FKBP6O75344 327 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 GNA14O95837 355 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 MYBP10242 640 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 PIM1P11309 404 aaPredicted RBP4.27□□□□□ -1.73
CHD2-225ENST00000636861 CYP2C9P11712 490 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 PHKG2P15735 406 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 ANXA13P27216 316 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 PTPN4P29074 926 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 S100A5P33763 92 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 RPL5P46777 297 aaKnown RBP4.27□□□□□ -1.73
CHD2-225ENST00000636861 HSPA13P48723 471 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 CARSP49589 748 aaKnown RBP4.27□□□□□ -1.73
CHD2-225ENST00000636861 MXI1P50539 228 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 TUBP50607 506 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 ATN1P54259 1190 aaPredicted RBP4.27□□□□□ -1.73
CHD2-225ENST00000636861 YARSP54577 528 aaKnown RBP4.27□□□□□ -1.73
CHD2-225ENST00000636861 NOP14P78316 857 aaKnown RBP4.27□□□□□ -1.73
CHD2-225ENST00000636861 COG7P83436 770 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 RING1Q06587 406 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 DMPKQ09013 629 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 NR1H3Q13133 447 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 MED21Q13503 144 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 PLS1Q14651 629 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 LPIN1Q14693 890 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 SPCS2Q15005 226 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 TNIP1Q15025 636 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 KRT31Q15323 416 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 SPRED3Q2MJR0 410 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 TCP11X2Q5H9J9 407 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 SH3D19Q5HYK7 790 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 SLC9C2Q5TAH2 1124 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 DEPDC1Q5TB30 811 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 IL23RQ5VWK5 629 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 KIAA1841Q6NSI8 718 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 CCDC62Q6P9F0 684 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 C1orf228Q6PIY5 440 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 SHC4Q6S5L8 630 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 FRA10AC1Q70Z53 315 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 APTXQ7Z2E3 356 aaKnown RBP4.27□□□□□ -1.73
CHD2-225ENST00000636861 TMC3Q7Z5M5 1100 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 VPS36Q86VN1 386 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 SFR1Q86XK3 245 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 TMEFF1Q8IYR6 380 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 ZBED8Q8IZ13 594 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 SYCE1Q8N0S2 351 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 BBS5Q8N3I7 341 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 MB21D1Q8N884 522 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 MINDY2Q8NBR6 621 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 CATSPER1Q8NEC5 780 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 DDHD1Q8NEL9 900 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 ANKK1Q8NFD2 765 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 TNIP2Q8NFZ5 429 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 SPATA20Q8TB22 786 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 TBC1D16Q8TBP0 767 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 SCG3Q8WXD2 468 aaKnown RBP4.27□□□□□ -1.73
CHD2-225ENST00000636861 CASKIN2Q8WXE0 1202 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 HERVK_113Q902F9 699 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 PRCCQ92733 491 aaPredicted RBP4.27□□□□□ -1.73
CHD2-225ENST00000636861 ARHGEF2Q92974 986 aaKnown RBP4.27□□□□□ -1.73
CHD2-225ENST00000636861 MCUR1Q96AQ8 359 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 SGF29Q96ES7 293 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 FAM163AQ96GL9 167 aaPredicted RBP4.27□□□□□ -1.73
CHD2-225ENST00000636861 LRGUKQ96M69 825 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 PCMTD1Q96MG8 357 aaPredicted RBP4.27□□□□□ -1.73
CHD2-225ENST00000636861 BIRC8Q96P09 236 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 LRRC37BQ96QE4 947 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 KRT12Q99456 494 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 FMO2Q99518 471 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 PRPF18Q99633 342 aaKnown RBP4.27□□□□□ -1.73
CHD2-225ENST00000636861 OLFM1Q99784 485 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 PRRX2Q99811 253 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 SLC39A3Q9BRY0 314 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 HAUS8Q9BT25 410 aa4.27□□□□□ -1.73
CHD2-225ENST00000636861 DDX23Q9BUQ8 820 aaKnown RBP4.27□□□□□ -1.73
CHD2-225ENST00000636861 MRPS26Q9BYN8 205 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms