RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 SEPT9Q9UHD8 586 aaPredicted RBP14.98□□□□□ -0.01
CACNA1A-228ENST00000636610 ANAPC5Q9UJX4 755 aa14.98□□□□□ -0.01
CACNA1A-228ENST00000636610 GTF3C4Q9UKN8 822 aa14.98□□□□□ -0.01
CACNA1A-228ENST00000636610 CENPFP49454 3210 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 A8MUI8 341 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 BRAFP15056 766 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 CDC25CP30307 473 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 MTERF2Q49AM1 385 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 TMEM270Q6UE05 265 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 FAM151AQ8WW52 585 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 TMEM143Q96AN5 459 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 KCND2Q9NZV8 630 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 ATAD5Q96QE3 1844 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 C5orf60A6NFR6 353 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 POC1B-GALNT4F8VUJ3 575 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 ZNF862O60290 1169 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 AGTP01019 485 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 ICAM1P05362 532 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 PAEPP09466 180 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 TAS2R40P59535 323 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 BAATQ14032 418 aaPredicted RBP14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 PPP2R5EQ16537 467 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 SYCP2LQ5T4T6 812 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 AKT1S1Q96B36 256 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 SGSM3Q96HU1 749 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 KIF9Q9HAQ2 790 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 FEM1BQ9UK73 627 aa14.97□□□□□ -0.01
CACNA1A-228ENST00000636610 SLX4Q8IY92 1834 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 LTBP1Q14766 1721 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 CHUKO15111 745 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 GRIN3BO60391 1043 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 BANF1O75531 89 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 MTMR2Q13614 643 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 SLMAPQ14BN4 828 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 PGM5Q15124 567 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 TMED2Q15363 201 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 ACCSLQ4AC99 568 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 ACAD10Q6JQN1 1059 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 TRPM8Q7Z2W7 1104 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 CCDC63Q8NA47 563 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 PSPC1Q8WXF1 523 aaKnown RBP14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 SPOCK2Q92563 424 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 ZNF516Q92618 1163 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 UBE4BO95155 1302 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 CNTNAP1P78357 1384 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 ATRNL1Q5VV63 1379 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 IFNB1P01574 187 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 CYP1A2P05177 515 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 GZMAP12544 262 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 ATF2P15336 505 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 RSBN1LQ6PCB5 846 aaPredicted RBP14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 CCDC91Q7Z6B0 441 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 DDX1Q92499 740 aaKnown RBP14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 LBHD1Q9BQE6 289 aaPredicted RBP14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 TACO1Q9BSH4 297 aaKnown RBP14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 MRIQ9BWK5 157 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 ACTR5Q9H9F9 607 aaPredicted RBP14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 UMODL1Q5DID0 1318 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 MROH7Q68CQ1 1323 aa14.96□□□□□ -0.01
CACNA1A-228ENST00000636610 NSFP46459 744 aaKnown RBP14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 PSMC5P62195 406 aa14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 ZNF365Q70YC5 407 aa14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 KIFAP3Q92845 792 aa14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 FNBP1Q96RU3 617 aa14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 SAE1Q9UBE0 346 aaPredicted RBP14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 DSG3P32926 999 aa14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 DRG2P55039 364 aaKnown RBP14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 ELF3P78545 371 aaPredicted RBP14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 PLCB3Q01970 1234 aa14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 TMEM130Q8N3G9 435 aa14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 TMEM8AQ9HCN3 771 aa14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 C1orf112Q9NSG2 853 aa14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 PARP2Q9UGN5 583 aa14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 PTPRJQ12913 1337 aa14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 STX2P32856 288 aa14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 HSD17B4P51659 736 aa14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 NLRP11P59045 1033 aaKnown RBP14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 RPL7AP62424 266 aaKnown RBP14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 DYNLT1P63172 113 aa14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 FASTKD3Q14CZ7 662 aaKnown RBP14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 CLEC16AQ2KHT3 1053 aa14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 VSTM1Q6UX27 236 aa14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 TAOK1Q7L7X3 1001 aa14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 FAM160B2Q86V87 743 aa14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 MCOLN2Q8IZK6 566 aa14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 ATG4CQ96DT6 458 aa14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 FHDC1Q9C0D6 1143 aaPredicted RBP14.95□□□□□ -0.02
CACNA1A-228ENST00000636610 RFX1P22670 979 aa14.94□□□□□ -0.02
CACNA1A-228ENST00000636610 PIK3CAP42336 1068 aa14.94□□□□□ -0.02
CACNA1A-228ENST00000636610 PTGER2P43116 358 aa14.94□□□□□ -0.02
CACNA1A-228ENST00000636610 CYP24A1Q07973 514 aa14.94□□□□□ -0.02
CACNA1A-228ENST00000636610 TRAF1Q13077 416 aa14.94□□□□□ -0.02
CACNA1A-228ENST00000636610 PRKG1Q13976 671 aa14.94□□□□□ -0.02
CACNA1A-228ENST00000636610 NLRX1Q86UT6 975 aa14.94□□□□□ -0.02
CACNA1A-228ENST00000636610 C4orf33Q8N1A6 199 aa14.94□□□□□ -0.02
CACNA1A-228ENST00000636610 PCDHB4Q9Y5E5 795 aa14.94□□□□□ -0.02
CACNA1A-228ENST00000636610 ATXN2Q99700 1313 aaKnown RBP14.94□□□□□ -0.02
CACNA1A-228ENST00000636610 LRRIQ4A6NIV6 560 aa14.94□□□□□ -0.02
CACNA1A-228ENST00000636610 WDR64B1ANS9 1081 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms