RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 RPS6KC1Q96S38 1066 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 POP1Q99575 1024 aaKnown RBP16.84■□□□□ 0.29
CTSD-207ENST00000636571 CNTN3Q9P232 1028 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 DNAJB4Q9UDY4 337 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 INSL6Q9Y581 213 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 ZNF233A6NK53 670 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 AP5Z1O43299 807 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 LINC00271P0C7V0 271 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 IGFBP6P24592 240 aaPredicted RBP16.84■□□□□ 0.29
CTSD-207ENST00000636571 MRE11P49959 708 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 TPM4P67936 248 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 DLG4P78352 724 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 FKBP3Q00688 224 aaKnown RBP16.84■□□□□ 0.29
CTSD-207ENST00000636571 PPP2R3AQ06190 1150 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 SOX4Q06945 474 aaPredicted RBP16.84■□□□□ 0.29
CTSD-207ENST00000636571 CYP24A1Q07973 514 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 TMEM174Q8WUU8 243 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 CCDC127Q96BQ5 260 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 PAAF1Q9BRP4 392 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 CWH43Q9H720 699 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 UBN1Q9NPG3 1134 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 TOPORSQ9NS56 1045 aaPredicted RBP16.84■□□□□ 0.29
CTSD-207ENST00000636571 TUBGCP4Q9UGJ1 667 aa16.84■□□□□ 0.29
CTSD-207ENST00000636571 F8W810 466 aa16.83■□□□□ 0.28
CTSD-207ENST00000636571 SOX1O00570 391 aaPredicted RBP16.83■□□□□ 0.28
CTSD-207ENST00000636571 KIAA0391O15091 583 aaKnown RBP16.83■□□□□ 0.28
CTSD-207ENST00000636571 INPPL1O15357 1258 aa16.83■□□□□ 0.28
CTSD-207ENST00000636571 HOXA2O43364 376 aa16.83■□□□□ 0.28
CTSD-207ENST00000636571 CDK11BP21127 795 aaKnown RBP16.83■□□□□ 0.28
CTSD-207ENST00000636571 CMTR2Q8IYT2 770 aaKnown RBP16.83■□□□□ 0.28
CTSD-207ENST00000636571 SP7Q8TDD2 431 aaPredicted RBP16.83■□□□□ 0.28
CTSD-207ENST00000636571 KIF12Q96FN5 646 aa16.83■□□□□ 0.28
CTSD-207ENST00000636571 PPP1R10Q96QC0 940 aaKnown RBP16.83■□□□□ 0.28
CTSD-207ENST00000636571 NKX2-4Q9H2Z4 354 aa16.83■□□□□ 0.28
CTSD-207ENST00000636571 NRDE2Q9H7Z3 1164 aa16.83■□□□□ 0.28
CTSD-207ENST00000636571 LINC01553A4QN01 128 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 CASTOR2A6NHX0 329 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 CETN3O15182 167 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 DLATP10515 647 aaKnown RBP16.82■□□□□ 0.28
CTSD-207ENST00000636571 KCNE1P15382 129 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 RPL13P26373 211 aaKnown RBP16.82■□□□□ 0.28
CTSD-207ENST00000636571 RNASELQ05823 741 aaKnown RBP16.82■□□□□ 0.28
CTSD-207ENST00000636571 KYAT1Q16773 422 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 FAM186BQ8IYM0 893 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 URGCPQ8TCY9 931 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 MFSD14AQ96MC6 490 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 FRMD4BQ9Y2L6 1034 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 PCDHA11Q9Y5I1 949 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 NT5C1B-RDH14C9J2C7 533 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 ZC3H11AO75152 810 aaKnown RBP eCLIP16.82■□□□□ 0.28
CTSD-207ENST00000636571 THP07101 528 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 TRIM49P0CI25 452 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 TRIM49CP0CI26 452 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 DNAJB2P25686 324 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 MYBPC2Q14324 1141 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 UVSSAQ2YD98 709 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 IRF2BP1Q8IU81 584 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 LRRC43Q8N309 656 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 OR5B17Q8NGF7 314 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 BORCS6Q96GS4 357 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 CERS4Q9HA82 394 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 PLEKHA5Q9HAU0 1116 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 KIAA1586Q9HCI6 787 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 RNF216Q9NWF9 866 aaPredicted RBP16.82■□□□□ 0.28
CTSD-207ENST00000636571 MTUS1Q9ULD2 1270 aa16.82■□□□□ 0.28
CTSD-207ENST00000636571 MYO9BQ13459 2157 aa16.81■□□□□ 0.28
CTSD-207ENST00000636571 LRRIQ3A6PVS8 624 aaPredicted RBP16.81■□□□□ 0.28
CTSD-207ENST00000636571 PSMC2P35998 433 aaKnown RBP16.81■□□□□ 0.28
CTSD-207ENST00000636571 GRIK3Q13003 919 aa16.81■□□□□ 0.28
CTSD-207ENST00000636571 PSMD6Q15008 389 aa16.81■□□□□ 0.28
CTSD-207ENST00000636571 C1orf220Q5T0J3 134 aa16.81■□□□□ 0.28
CTSD-207ENST00000636571 SPOUT1Q5T280 376 aaKnown RBP16.81■□□□□ 0.28
CTSD-207ENST00000636571 TMEM173Q86WV6 379 aaPredicted RBP16.81■□□□□ 0.28
CTSD-207ENST00000636571 COLGALT2Q8IYK4 626 aa16.81■□□□□ 0.28
CTSD-207ENST00000636571 FIBCD1Q8N539 461 aa16.81■□□□□ 0.28
CTSD-207ENST00000636571 ZNF516Q92618 1163 aa16.81■□□□□ 0.28
CTSD-207ENST00000636571 C17orf80Q9BSJ5 609 aa16.81■□□□□ 0.28
CTSD-207ENST00000636571 SCN1AP35498 2009 aa16.8■□□□□ 0.28
CTSD-207ENST00000636571 PPEF2O14830 753 aa16.8■□□□□ 0.28
CTSD-207ENST00000636571 ZNF18P17022 549 aa16.8■□□□□ 0.28
CTSD-207ENST00000636571 TFAMQ00059 246 aaKnown RBP16.8■□□□□ 0.28
CTSD-207ENST00000636571 DSC1Q08554 894 aa16.8■□□□□ 0.28
CTSD-207ENST00000636571 TMEM132DQ14C87 1099 aa16.8■□□□□ 0.28
CTSD-207ENST00000636571 ZBTB6Q15916 424 aa16.8■□□□□ 0.28
CTSD-207ENST00000636571 LRIT3Q3SXY7 679 aa16.8■□□□□ 0.28
CTSD-207ENST00000636571 CDKAL1Q5VV42 579 aa16.8■□□□□ 0.28
CTSD-207ENST00000636571 PARD3BQ8TEW8 1205 aa16.8■□□□□ 0.28
CTSD-207ENST00000636571 LRCH3Q96II8 777 aa16.8■□□□□ 0.28
CTSD-207ENST00000636571 MTMR12Q9C0I1 747 aa16.8■□□□□ 0.28
CTSD-207ENST00000636571 A0A1W2PPC1 479 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 KCNJ18B7U540 433 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 IL18RAPO95256 599 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 SERPINC1P01008 464 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 EPB41P11171 864 aaKnown RBP16.79■□□□□ 0.28
CTSD-207ENST00000636571 SLC11A1P49279 550 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 TAP1Q03518 808 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 KCNJ12Q14500 433 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 FOXR2Q6PJQ5 311 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 HASPINQ8TF76 798 aa16.79■□□□□ 0.28
CTSD-207ENST00000636571 BCL7CQ8WUZ0 217 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms