RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 LAMC3Q9Y6N6 1575 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 CTTNBP2Q8WZ74 1663 aa1.58□□□□□ -2.16
SMARCB1-209ENST00000635578 TRGV11A0A075B6L2 103 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 CCDC163A0A0D9SF12 145 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 LCHNA4D1U4 455 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 CXorf49A8MYA2 514 aaPredicted RBP1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 YY2O15391 372 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 PFKMP08237 780 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 PTPN7P35236 360 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 FLT3P36888 993 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 NEK4P51957 841 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 VAV2P52735 878 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 MAPK10P53779 464 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 FOXG1P55316 489 aaPredicted RBP1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 CLRN1P58418 232 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 SLC10A2Q12908 348 aaPredicted RBP1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 SERINC3Q13530 473 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 SART3Q15020 963 aaKnown RBP1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 LLGL1Q15334 1064 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 SF3B3Q15393 1217 aaKnown RBP1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 KRTAP27-1Q3LI81 207 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 ZNF260Q3ZCT1 412 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 C2orf27AQ580R0 203 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 TAF7LQ5H9L4 462 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 ZC3H12BQ5HYM0 836 aaKnown RBP1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 KAZNQ674X7 775 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 SLC9A4Q6AI14 798 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 CNNM4Q6P4Q7 775 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 FOXR2Q6PJQ5 311 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 ZNF782Q6ZMW2 699 aaPredicted RBP1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 ESPNLQ6ZVH7 1005 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 UBE2R2Q712K3 238 aaPredicted RBP1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 PDZD4Q76G19 769 aaPredicted RBP1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 HOMER1Q86YM7 354 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 DENND1AQ8TEH3 1009 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 FBXL20Q96IG2 436 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 BOD1Q96IK1 185 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 TIMP4Q99727 224 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 SH2D3AQ9BRG2 576 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 ANO3Q9BYT9 981 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 SLKQ9H2G2 1235 aaPredicted RBP1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 BHMT2Q9H2M3 363 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 PIF1Q9H611 641 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 ANLNQ9NQW6 1124 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 FANCLQ9NW38 375 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 OXSMQ9NWU1 459 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 GPRC5DQ9NZD1 345 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 MSRAQ9UJ68 235 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 KCNE5Q9UJ90 142 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 ZKSCAN5Q9Y2L8 839 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 SPO11Q9Y5K1 396 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 ENTPD2Q9Y5L3 495 aa1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 MRPL42Q9Y6G3 142 aaKnown RBP1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 PPRC1Q5VV67 1664 aaKnown RBP1.57□□□□□ -2.16
SMARCB1-209ENST00000635578 ERCC6L2Q5T890 1561 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 PEG3Q9GZU2 1588 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 KIF21BO75037 1637 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 PRSS38A1L453 326 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 LINC01548A6NM66 108 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 LINC00473A8K010 186 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 PRR23D1E9PI22 279 aaPredicted RBP1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 PPP1R12AO14974 1030 aaPredicted RBP1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 TMEM127O75204 238 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 CDC45O75419 566 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 MOSPD3O75425 235 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 PRSS23O95084 383 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 SNRPA1P09661 255 aaKnown RBP1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 ELFN1P0C7U0 828 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 PRR23D2P0DMB1 279 aaPredicted RBP1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 SLC6A2P23975 617 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 CD40P25942 277 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 EPHB2P29323 1055 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 MPGP29372 298 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 IGFALSP35858 605 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 FOLR3P41439 243 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 FLT3LGP49771 235 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 SSBP2P81877 361 aaPredicted RBP1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 RAPGEF1Q13905 1077 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 TCEA2Q15560 299 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 CYP2A13Q16696 494 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 LONRF2Q1L5Z9 754 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 SUPT20HL1Q3ZLR7 823 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 CFAP100Q494V2 611 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 CT47A1Q5JQC4 288 aaPredicted RBP1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 MORN5Q5VZ52 161 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 KIAA1161Q6NSJ0 714 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 SLC2A7Q6PXP3 512 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 TSHZ1Q6ZSZ6 1077 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 YTHDF3Q7Z739 585 aaKnown RBP1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 RASAL3Q86YV0 1011 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 ZZZ3Q8IYH5 903 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 COLGALT2Q8IYK4 626 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 SAMD14Q8IZD0 417 aaPredicted RBP1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 FAM43AQ8N2R8 423 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 LNX2Q8N448 690 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 ZBTB8BQ8NAP8 495 aaPredicted RBP1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 SMRP1Q8NCR6 262 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 TOR1AIP2Q8NFQ8 470 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 ZNF480Q8WV37 535 aa1.56□□□□□ -2.16
SMARCB1-209ENST00000635578 FUBP1Q96AE4 644 aaKnown RBP1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms