RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ITSN1Q15811 1721 aa3.3□□□□□ -1.88
SMARCB1-208ENST00000634926 CCDC144AA2RUR9 1427 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 TNS3Q68CZ2 1445 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 ABCC11Q96J66 1382 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 SALL3Q9BXA9 1300 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 CLASP2O75122 1294 aaKnown RBP3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 SCAF4O95104 1147 aaKnown RBP3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 RASGRP1O95267 797 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 MATN4O95460 622 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 CFBP00751 764 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 JMJD7P0C870 316 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 ATF3P18847 181 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 CTGFP29279 349 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 GUCY2FP51841 1108 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 STRN3Q13033 797 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 FAM50AQ14320 339 aaKnown RBP3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 SEPT7Q16181 437 aaKnown RBP3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 FAM214AQ32MH5 1076 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 CFAP100Q494V2 611 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 HSP90AB2PQ58FF8 381 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 CDCA2Q69YH5 1023 aaPredicted RBP3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 ZCCHC8Q6NZY4 707 aaKnown RBP3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 KLHDC10Q6PID8 442 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 ZC3H7AQ8IWR0 971 aaKnown RBP3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 SRRM1Q8IYB3 904 aaKnown RBP3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 ZNF366Q8N895 744 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 WDR66Q8TBY9 1149 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 LINC00476Q8WZB0 136 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 DDX17Q92841 729 aaKnown RBP3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 NKD2Q969F2 451 aaPredicted RBP3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 MYEOVQ96EZ4 313 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 GBP4Q96PP9 640 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 CATSPERZQ9NTU4 200 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 DKK2Q9UBU2 259 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 VWA7Q9Y334 891 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 PCDHA9Q9Y5H5 950 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 PCDHA8Q9Y5H6 950 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 NUP188Q5SRE5 1749 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 PEAK1Q9H792 1746 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 NRKQ7Z2Y5 1582 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 TULP4Q9NRJ4 1543 aa3.29□□□□□ -1.88
SMARCB1-208ENST00000634926 ATP7BP35670 1465 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 BLMP54132 1417 aaPredicted RBP3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 ANKARQ7Z5J8 1434 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 YTHDC2Q9H6S0 1430 aaKnown RBP3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 ANKRD30BQ9BXX2 1392 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 PLEKHH1Q9ULM0 1364 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 KIAA1210Q9ULL0 1709 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 RPGRIP1LQ68CZ1 1315 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 USP54Q70EL1 1684 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 TMEM200CA6NKL6 621 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 ARVCFO00192 962 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 GPR39O43194 453 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 ZEB2O60315 1214 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 KPNA6O60684 536 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 RBMXL2O75526 392 aaKnown RBP3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 ALDH1L1O75891 902 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 BPIP17213 487 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 LAG3P18627 525 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 SCNN1BP51168 640 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 SEC24CP53992 1094 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 EPHB1P54762 984 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 RBM6P78332 1123 aaKnown RBP3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 GUCY1A3Q02108 690 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 STAT4Q14765 748 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 ABHD17CQ6PCB6 329 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 C1QL2Q7Z5L3 287 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 CLEC14AQ86T13 490 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 DDX53Q86TM3 631 aaKnown RBP3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 FMNL3Q8IVF7 1028 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 NOSTRINQ8IVI9 506 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 CMTR2Q8IYT2 770 aaKnown RBP3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 LILRA3Q8N6C8 439 aaPredicted RBP3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 OR2W6PQ8NHA6 318 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 LRRC59Q96AG4 307 aaKnown RBP3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 FOXRED1Q96CU9 486 aaPredicted RBP3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 C16orf92Q96LL3 132 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 ZNF778Q96MU6 729 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 TTC1Q99614 292 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 ALG1Q9BT22 464 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 TEX101Q9BY14 249 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 CPEB1Q9BZB8 566 aaKnown RBP3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 PUS7LQ9H0K6 701 aaKnown RBP3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 IFT22Q9H7X7 185 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 SLC5A4Q9NY91 659 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 SAMD15Q9P1V8 674 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 TCEAL9Q9UHQ7 104 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 INSL6Q9Y581 213 aa3.28□□□□□ -1.88
SMARCB1-208ENST00000634926 PARP4Q9UKK3 1724 aaKnown RBP3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 SBNO1A3KN83 1393 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 NPHP3Q7Z494 1330 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 ADGRF5Q8IZF2 1346 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 CGB1A6NKQ9 187 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 GOLGA8BA8MQT2 603 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 GOLGA6L22H0YM25 854 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 MAFO75444 373 aaPredicted RBP3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 KATNA1O75449 491 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 C1QL1O75973 258 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 TOX4O94842 621 aa3.27□□□□□ -1.89
SMARCB1-208ENST00000634926 SRGAP2CP0DJJ0 459 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms