RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 PBKQ96KB5 322 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 NT5C1BQ96P26 610 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 FNBP1Q96RU3 617 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 MMS19Q96T76 1030 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 AGPAT1Q99943 283 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 KIFC3Q9BVG8 833 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 SELENOOQ9BVL4 669 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 IP6K2Q9UHH9 426 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 SALL4Q9UJQ4 1053 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 AJAP1Q9UKB5 411 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-230ENST00000634433 ABT1Q9ULW3 272 aaKnown RBP7.7□□□□□ -1.18
BRCA1-230ENST00000634433 OTOFQ9HC10 1997 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 CASP8AP2Q9UKL3 1982 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 LRRIQ4A6NIV6 560 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 LRRIQ3A6PVS8 624 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-230ENST00000634433 ADRB2P07550 413 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 RHOXF2BP0C7M4 288 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 GLRA2P23416 452 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 GTF2A2P52657 109 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 SOX10P56693 466 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 MTA1Q13330 715 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 MXD4Q14582 209 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-230ENST00000634433 LY6KQ17RY6 165 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 Q3C1V9 767 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 GLE1Q53GS7 698 aaKnown RBP7.7□□□□□ -1.18
BRCA1-230ENST00000634433 ANKRD23Q86SG2 305 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 DEPDC4Q8N2C3 294 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 GPRC5AQ8NFJ5 357 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 GLG1Q92896 1179 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 TMEM143Q96AN5 459 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 CCDC127Q96BQ5 260 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 RHOXF2Q9BQY4 288 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 TLR10Q9BXR5 811 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 GPR88Q9GZN0 384 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 C2orf40Q9H1Z8 148 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 SMARCAD1Q9H4L7 1026 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 RAB20Q9NX57 234 aa7.7□□□□□ -1.18
BRCA1-230ENST00000634433 AGO2Q9UKV8 859 aaKnown RBP7.7□□□□□ -1.18
BRCA1-230ENST00000634433 STRNO43815 780 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 ADCY3O60266 1144 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 GCLCP48506 637 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-230ENST00000634433 GALCP54803 685 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 RACK1P63244 317 aaKnown RBP7.69□□□□□ -1.18
BRCA1-230ENST00000634433 GPS2Q13227 327 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 PSMD6Q15008 389 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 WDR44Q5JSH3 913 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 ALKBH2Q6NS38 261 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 SLC39A4Q6P5W5 647 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 ZBTB8OSQ8IWT0 167 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 ABRAQ8N0Z2 381 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 PLEKHO2Q8TD55 490 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 ASAP3Q8TDY4 903 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 EPS8L1Q8TE68 723 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 ATP8B4Q8TF62 1192 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 SCFD2Q8WU76 684 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 PSPC1Q8WXF1 523 aaKnown RBP7.69□□□□□ -1.18
BRCA1-230ENST00000634433 CEP89Q96ST8 783 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 PCYT2Q99447 389 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 GPR20Q99678 358 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 FAM213AQ9BRX8 229 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 PACSIN1Q9BY11 444 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 TXNRD2Q9NNW7 524 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 FAM53CQ9NYF3 392 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 TELO2Q9Y4R8 837 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 WDR81Q562E7 1941 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 NCANO14594 1321 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 ADGRA3Q8IWK6 1321 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 LCTP09848 1927 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 ZNF185O15231 689 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 ASAP2O43150 1006 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 PEX10O60683 326 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 PGK2P07205 417 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 POTEJP0CG39 1038 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 PNMA6AP0CW24 399 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-230ENST00000634433 VDRP11473 427 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 NAT1P18440 290 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 MATR3P43243 847 aaKnown RBP eCLIP7.69□□□□□ -1.18
BRCA1-230ENST00000634433 AP3M2P53677 418 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 NFRKBQ6P4R8 1299 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 ZPBP2Q6X784 338 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 EEPD1Q7L9B9 569 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 TAS1R3Q7RTX0 852 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 HDXQ7Z353 690 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 GLYCTKQ8IVS8 523 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 ARHGEF19Q8IW93 802 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 RHOT2Q8IXI1 618 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 FAM71AQ8IYT1 594 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 PPM1KQ8N3J5 372 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 NOA1Q8NC60 698 aaKnown RBP7.69□□□□□ -1.18
BRCA1-230ENST00000634433 SPATA4Q8NEY3 305 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 TPCN2Q8NHX9 752 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 LNX1Q8TBB1 728 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-230ENST00000634433 RFFLQ8WZ73 363 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 SPATA33Q96N06 139 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 SYT11Q9BT88 431 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 EPC1Q9H2F5 836 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 ARNT2Q9HBZ2 717 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 SEPT11Q9NVA2 429 aaKnown RBP7.69□□□□□ -1.18
BRCA1-230ENST00000634433 ZNF446Q9NWS9 450 aa7.69□□□□□ -1.18
BRCA1-230ENST00000634433 MAP3K7O43318 606 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms