RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	ALDH2	P05091	517 aa		28.23	■■■□□ 2.11
UBE3A-222	ENST00000630907	GALT	P07902	379 aa		28.23	■■■□□ 2.11
UBE3A-222	ENST00000630907	ALDH7A1	P49419	539 aa	Known RBP	28.23	■■■□□ 2.11
UBE3A-222	ENST00000630907	CYP24A1	Q07973	514 aa		28.23	■■■□□ 2.11
UBE3A-222	ENST00000630907	SURF1	Q15526	300 aa		28.23	■■■□□ 2.11
UBE3A-222	ENST00000630907	EPC2	Q52LR7	807 aa		28.23	■■■□□ 2.11
UBE3A-222	ENST00000630907	JADE1	Q6IE81	842 aa		28.23	■■■□□ 2.11
UBE3A-222	ENST00000630907	TTI2	Q6NXR4	508 aa		28.23	■■■□□ 2.11
UBE3A-222	ENST00000630907	MFSD14A	Q96MC6	490 aa		28.23	■■■□□ 2.11
UBE3A-222	ENST00000630907	CERS4	Q9HA82	394 aa		28.23	■■■□□ 2.11
UBE3A-222	ENST00000630907	PDE11A	Q9HCR9	933 aa		28.23	■■■□□ 2.11
UBE3A-222	ENST00000630907	ANO10	Q9NW15	660 aa		28.23	■■■□□ 2.11
UBE3A-222	ENST00000630907	UBQLN1	Q9UMX0	589 aa	Known RBP	28.23	■■■□□ 2.11
UBE3A-222	ENST00000630907	RB1	P06400	928 aa		28.22	■■■□□ 2.11
UBE3A-222	ENST00000630907	NFIC	P08651	508 aa		28.22	■■■□□ 2.11
UBE3A-222	ENST00000630907	OR1G1	P47890	313 aa		28.22	■■■□□ 2.11
UBE3A-222	ENST00000630907	SLC11A1	P49279	550 aa		28.22	■■■□□ 2.11
UBE3A-222	ENST00000630907	WNT7B	P56706	349 aa		28.22	■■■□□ 2.11
UBE3A-222	ENST00000630907	ZBTB6	Q15916	424 aa		28.22	■■■□□ 2.11
UBE3A-222	ENST00000630907	STX1A	Q16623	288 aa		28.22	■■■□□ 2.11
UBE3A-222	ENST00000630907	CT47A1	Q5JQC4	288 aa	Predicted RBP	28.22	■■■□□ 2.11
UBE3A-222	ENST00000630907	ZC3H3	Q8IXZ2	948 aa	Known RBP	28.22	■■■□□ 2.11
UBE3A-222	ENST00000630907	ARNTL2	Q8WYA1	636 aa		28.22	■■■□□ 2.11
UBE3A-222	ENST00000630907	C18orf25	Q96B23	403 aa	Predicted RBP	28.22	■■■□□ 2.11
UBE3A-222	ENST00000630907	DUSP9	Q99956	384 aa	Known RBP	28.22	■■■□□ 2.11
UBE3A-222	ENST00000630907	PLVAP	Q9BX97	442 aa		28.22	■■■□□ 2.11
UBE3A-222	ENST00000630907	FAN1	Q9Y2M0	1017 aa		28.22	■■■□□ 2.11
UBE3A-222	ENST00000630907	C2CD2	Q9Y426	696 aa		28.22	■■■□□ 2.11
UBE3A-222	ENST00000630907	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	28.22	■■■□□ 2.11
UBE3A-222	ENST00000630907	MAPK13	O15264	365 aa		28.21	■■■□□ 2.11
UBE3A-222	ENST00000630907	XPOT	O43592	962 aa	Known RBP	28.21	■■■□□ 2.11
UBE3A-222	ENST00000630907	AKAP3	O75969	853 aa		28.21	■■■□□ 2.11
UBE3A-222	ENST00000630907	PSMC2	P35998	433 aa	Known RBP	28.21	■■■□□ 2.11
UBE3A-222	ENST00000630907	PBX3	P40426	434 aa		28.21	■■■□□ 2.11
UBE3A-222	ENST00000630907	TMEM132D	Q14C87	1099 aa		28.21	■■■□□ 2.11
UBE3A-222	ENST00000630907	PSMD6	Q15008	389 aa		28.21	■■■□□ 2.11
UBE3A-222	ENST00000630907	NT5DC4	Q86YG4	428 aa		28.21	■■■□□ 2.11
UBE3A-222	ENST00000630907	EEF2KMT	Q96G04	330 aa		28.21	■■■□□ 2.11
UBE3A-222	ENST00000630907	CASTOR2	A6NHX0	329 aa		28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	C5orf67	F2Z3F1	127 aa		28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	NRP1	O14786	923 aa		28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	CYP3A5	P20815	502 aa		28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	ERCC5	P28715	1186 aa	Predicted RBP	28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	TYRO3	Q06418	890 aa		28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	SOX4	Q06945	474 aa	Predicted RBP	28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	ZNF697	Q5TEC3	545 aa		28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	GPR153	Q6NV75	609 aa		28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	EFCAB13	Q8IY85	973 aa		28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	FAM186B	Q8IYM0	893 aa		28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	FBXO22	Q8NEZ5	403 aa		28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	BEST2	Q8NFU1	509 aa		28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	CCDC127	Q96BQ5	260 aa		28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	UROC1	Q96N76	676 aa		28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	FNBP1	Q96RU3	617 aa		28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	MKNK1	Q9BUB5	465 aa		28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	TTYH1	Q9H313	450 aa	Predicted RBP	28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	TUBGCP4	Q9UGJ1	667 aa		28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	PRG3	Q9Y2Y8	225 aa	Predicted RBP	28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	RALGAPA2	Q2PPJ7	1873 aa		28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	TRIP11	Q15643	1979 aa		28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	TDRD15	B5MCY1	1934 aa	Known RBP	28.2	■■■□□ 2.1
UBE3A-222	ENST00000630907	NT5C1B-RDH14	C9J2C7	533 aa		28.19	■■■□□ 2.1
UBE3A-222	ENST00000630907	PPM1A	P35813	382 aa		28.19	■■■□□ 2.1
UBE3A-222	ENST00000630907	SPATA1	Q5VX52	437 aa		28.19	■■■□□ 2.1
UBE3A-222	ENST00000630907	SLC39A11	Q8N1S5	342 aa		28.19	■■■□□ 2.1
UBE3A-222	ENST00000630907	CSGALNACT2	Q8N6G5	542 aa		28.19	■■■□□ 2.1
UBE3A-222	ENST00000630907	CEP63	Q96MT8	703 aa		28.19	■■■□□ 2.1
UBE3A-222	ENST00000630907	COLEC11	Q9BWP8	271 aa		28.19	■■■□□ 2.1
UBE3A-222	ENST00000630907	GOLGA2P5	Q9HBQ8	144 aa		28.19	■■■□□ 2.1
UBE3A-222	ENST00000630907	SPG21	Q9NZD8	308 aa		28.19	■■■□□ 2.1
UBE3A-222	ENST00000630907	CACNG4	Q9UBN1	327 aa		28.19	■■■□□ 2.1
UBE3A-222	ENST00000630907	LAMA3	Q16787	3333 aa		28.19	■■■□□ 2.1
UBE3A-222	ENST00000630907	EPB41	P11171	864 aa	Known RBP	28.18	■■■□□ 2.1
UBE3A-222	ENST00000630907	TFAM	Q00059	246 aa	Known RBP	28.18	■■■□□ 2.1
UBE3A-222	ENST00000630907	KLHL23	Q8NBE8	558 aa		28.18	■■■□□ 2.1
UBE3A-222	ENST00000630907	CACTIN	Q8WUQ7	758 aa	Known RBP	28.18	■■■□□ 2.1
UBE3A-222	ENST00000630907	DDX27	Q96GQ7	796 aa	Known RBP	28.18	■■■□□ 2.1
UBE3A-222	ENST00000630907	MED15	Q96RN5	788 aa		28.18	■■■□□ 2.1
UBE3A-222	ENST00000630907	PAAF1	Q9BRP4	392 aa		28.18	■■■□□ 2.1
UBE3A-222	ENST00000630907	C11orf84	Q9BUA3	381 aa	Predicted RBP	28.18	■■■□□ 2.1
UBE3A-222	ENST00000630907	SYCE3	A1L190	88 aa		28.17	■■■□□ 2.1
UBE3A-222	ENST00000630907	SLC16A3	O15427	465 aa	Known RBP	28.17	■■■□□ 2.1
UBE3A-222	ENST00000630907	DLAT	P10515	647 aa	Known RBP	28.17	■■■□□ 2.1
UBE3A-222	ENST00000630907	RPL9	P32969	192 aa	Known RBP	28.17	■■■□□ 2.1
UBE3A-222	ENST00000630907	FXR1	P51114	621 aa	Known RBP eCLIP	28.17	■■■□□ 2.1
UBE3A-222	ENST00000630907	INTS8	Q75QN2	995 aa	Known RBP	28.17	■■■□□ 2.1
UBE3A-222	ENST00000630907	FILIP1	Q7Z7B0	1213 aa		28.17	■■■□□ 2.1
UBE3A-222	ENST00000630907	RABGGTA	Q92696	567 aa		28.17	■■■□□ 2.1
UBE3A-222	ENST00000630907	CGRRF1	Q99675	332 aa		28.17	■■■□□ 2.1
UBE3A-222	ENST00000630907	KIAA1671	Q9BY89	1806 aa		28.16	■■■□□ 2.1
UBE3A-222	ENST00000630907	FGF18	O76093	207 aa		28.16	■■■□□ 2.1
UBE3A-222	ENST00000630907	FGFR1OP	O95684	399 aa	Known RBP	28.16	■■■□□ 2.1
UBE3A-222	ENST00000630907	KRT13	P13646	458 aa		28.16	■■■□□ 2.1
UBE3A-222	ENST00000630907	TNNI1	P19237	187 aa		28.16	■■■□□ 2.1
UBE3A-222	ENST00000630907	LRPAP1	P30533	357 aa		28.16	■■■□□ 2.1
UBE3A-222	ENST00000630907	CLCNKB	P51801	687 aa		28.16	■■■□□ 2.1
UBE3A-222	ENST00000630907	GUCY2F	P51841	1108 aa		28.16	■■■□□ 2.1
UBE3A-222	ENST00000630907	GPM6B	Q13491	265 aa		28.16	■■■□□ 2.1
UBE3A-222	ENST00000630907	LMBRD2	Q68DH5	695 aa	Predicted RBP	28.16	■■■□□ 2.1
UBE3A-222	ENST00000630907	DCLRE1A	Q6PJP8	1040 aa		28.16	■■■□□ 2.1

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms