RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 TBC1D7Q9P0N9 293 aa12.14□□□□□ -0.47
DDX41-219ENST00000629036 ATP6V1DQ9Y5K8 247 aa12.14□□□□□ -0.47
DDX41-219ENST00000629036 CASTOR2A6NHX0 329 aa12.13□□□□□ -0.47
DDX41-219ENST00000629036 TMEM189-UBE2V1I3L0A0 370 aa12.13□□□□□ -0.47
DDX41-219ENST00000629036 OGTO15294 1046 aa12.13□□□□□ -0.47
DDX41-219ENST00000629036 CLDN3O15551 220 aa12.13□□□□□ -0.47
DDX41-219ENST00000629036 DCXO43602 365 aa12.13□□□□□ -0.47
DDX41-219ENST00000629036 THP07101 528 aa12.13□□□□□ -0.47
DDX41-219ENST00000629036 PRR29P0C7W0 189 aa12.13□□□□□ -0.47
DDX41-219ENST00000629036 HARSP12081 509 aaKnown RBP12.13□□□□□ -0.47
DDX41-219ENST00000629036 IDEP14735 1019 aa12.13□□□□□ -0.47
DDX41-219ENST00000629036 NRIP1P48552 1158 aa12.13□□□□□ -0.47
DDX41-219ENST00000629036 LIG4P49917 911 aa12.13□□□□□ -0.47
DDX41-219ENST00000629036 UPP1Q16831 310 aa12.13□□□□□ -0.47
DDX41-219ENST00000629036 TMEM132AQ24JP5 1023 aa12.13□□□□□ -0.47
DDX41-219ENST00000629036 LEXMQ3ZCV2 418 aa12.13□□□□□ -0.47
DDX41-219ENST00000629036 HERC4Q5GLZ8 1057 aaPredicted RBP12.13□□□□□ -0.47
DDX41-219ENST00000629036 UNC13DQ70J99 1090 aa12.13□□□□□ -0.47
DDX41-219ENST00000629036 VPS52Q8N1B4 723 aa12.13□□□□□ -0.47
DDX41-219ENST00000629036 ENGASEQ8NFI3 743 aa12.13□□□□□ -0.47
DDX41-219ENST00000629036 FEZF2Q8TBJ5 459 aa12.13□□□□□ -0.47
DDX41-219ENST00000629036 C18orf25Q96B23 403 aaPredicted RBP12.13□□□□□ -0.47
DDX41-219ENST00000629036 PAGE5Q96GU1 130 aa12.13□□□□□ -0.47
DDX41-219ENST00000629036 RPS6KC1Q96S38 1066 aa12.13□□□□□ -0.47
DDX41-219ENST00000629036 CCDC94Q9BW85 323 aaPredicted RBP12.13□□□□□ -0.47
DDX41-219ENST00000629036 BLZF1Q9H2G9 400 aa12.13□□□□□ -0.47
DDX41-219ENST00000629036 MRPL44Q9H9J2 332 aaKnown RBP12.13□□□□□ -0.47
DDX41-219ENST00000629036 NGRNQ9NPE2 291 aaKnown RBP12.13□□□□□ -0.47
DDX41-219ENST00000629036 FAM13BQ9NYF5 915 aa12.13□□□□□ -0.47
DDX41-219ENST00000629036 CPSF3Q9UKF6 684 aaKnown RBP12.13□□□□□ -0.47
DDX41-219ENST00000629036 CIZ1Q9ULV3 898 aaPredicted RBP12.13□□□□□ -0.47
DDX41-219ENST00000629036 FAN1Q9Y2M0 1017 aa12.13□□□□□ -0.47
DDX41-219ENST00000629036 PER2O15055 1255 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 CLASP2O75122 1294 aaKnown RBP12.12□□□□□ -0.47
DDX41-219ENST00000629036 PRPF6O94906 941 aaKnown RBP12.12□□□□□ -0.47
DDX41-219ENST00000629036 GCNT3O95395 438 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 SOD2P04179 222 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 ALDH2P05091 517 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 CLTAP09496 248 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 ABCD1P33897 745 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 OR1G1P47890 313 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 ASIC1P78348 528 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 KRT17Q04695 432 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 SNW1Q13573 536 aaKnown RBP12.12□□□□□ -0.47
DDX41-219ENST00000629036 HSP90AA2PQ14568 343 aaPredicted RBP12.12□□□□□ -0.47
DDX41-219ENST00000629036 BMT2Q1RMZ1 405 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 KIAA0319Q5VV43 1072 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 FUT10Q6P4F1 479 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 TMEM184AQ6ZMB5 413 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 HFE2Q6ZVN8 426 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 CCDC65Q8IXS2 484 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 FMR1NBQ8N0W7 255 aaPredicted RBP12.12□□□□□ -0.47
DDX41-219ENST00000629036 FSIP1Q8NA03 581 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 KIAA0895Q8NCT3 520 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 SLC22A17Q8WUG5 538 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 SCFD1Q8WVM8 642 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 B3GALT6Q96L58 329 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 ACAP3Q96P50 834 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 KCNH6Q9H252 994 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 ENTPD7Q9NQZ7 604 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 TUBGCP4Q9UGJ1 667 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 ADAM28Q9UKQ2 775 aa12.12□□□□□ -0.47
DDX41-219ENST00000629036 PTPRDP23468 1912 aa12.11□□□□□ -0.47
DDX41-219ENST00000629036 H3BQ06 376 aaPredicted RBP12.11□□□□□ -0.47
DDX41-219ENST00000629036 EIF3DO15371 548 aaKnown RBP eCLIP12.11□□□□□ -0.47
DDX41-219ENST00000629036 TGFB1I1O43294 461 aa12.11□□□□□ -0.47
DDX41-219ENST00000629036 SYKP43405 635 aa12.11□□□□□ -0.47
DDX41-219ENST00000629036 AFMP43652 599 aa12.11□□□□□ -0.47
DDX41-219ENST00000629036 CLCNKBP51801 687 aa12.11□□□□□ -0.47
DDX41-219ENST00000629036 DSG1Q02413 1049 aa12.11□□□□□ -0.47
DDX41-219ENST00000629036 ALCAMQ13740 583 aa12.11□□□□□ -0.47
DDX41-219ENST00000629036 SMC1AQ14683 1233 aaKnown RBP12.11□□□□□ -0.47
DDX41-219ENST00000629036 RTP2Q5QGT7 225 aa12.11□□□□□ -0.47
DDX41-219ENST00000629036 FAM26FQ5R3K3 315 aa12.11□□□□□ -0.47
DDX41-219ENST00000629036 TMC7Q7Z402 723 aa12.11□□□□□ -0.47
DDX41-219ENST00000629036 APBB1IPQ7Z5R6 666 aaPredicted RBP12.11□□□□□ -0.47
DDX41-219ENST00000629036 RBM23Q86U06 439 aaKnown RBP12.11□□□□□ -0.47
DDX41-219ENST00000629036 ZNF507Q8TCN5 953 aa12.11□□□□□ -0.47
DDX41-219ENST00000629036 HASPINQ8TF76 798 aa12.11□□□□□ -0.47
DDX41-219ENST00000629036 BICD1Q96G01 975 aa12.11□□□□□ -0.47
DDX41-219ENST00000629036 FAM193BQ96PV7 902 aaPredicted RBP12.11□□□□□ -0.47
DDX41-219ENST00000629036 CDCA3Q99618 268 aaPredicted RBP12.11□□□□□ -0.47
DDX41-219ENST00000629036 CBWD1Q9BRT8 395 aa12.11□□□□□ -0.47
DDX41-219ENST00000629036 TCHPQ9BT92 498 aa12.11□□□□□ -0.47
DDX41-219ENST00000629036 TLE6Q9H808 572 aa12.11□□□□□ -0.47
DDX41-219ENST00000629036 RXFP1Q9HBX9 757 aa12.11□□□□□ -0.47
DDX41-219ENST00000629036 TOPORSQ9NS56 1045 aaPredicted RBP12.11□□□□□ -0.47
DDX41-219ENST00000629036 CLDND1Q9NY35 253 aa12.11□□□□□ -0.47
DDX41-219ENST00000629036 USP25Q9UHP3 1055 aa12.11□□□□□ -0.47
DDX41-219ENST00000629036 PUF60Q9UHX1 559 aaKnown RBP12.11□□□□□ -0.47
DDX41-219ENST00000629036 BARX2Q9UMQ3 279 aaPredicted RBP12.11□□□□□ -0.47
DDX41-219ENST00000629036 HCFC2Q9Y5Z7 792 aa12.11□□□□□ -0.47
DDX41-219ENST00000629036 UBE4BO95155 1302 aa12.11□□□□□ -0.47
DDX41-219ENST00000629036 PVALEFA0A1B0GWK0 134 aa12.1□□□□□ -0.47
DDX41-219ENST00000629036 GRXCR2A6NFK2 248 aa12.1□□□□□ -0.47
DDX41-219ENST00000629036 LACTBL1A8MY62 500 aa12.1□□□□□ -0.47
DDX41-219ENST00000629036 PPEF2O14830 753 aa12.1□□□□□ -0.47
DDX41-219ENST00000629036 NCK2O43639 380 aa12.1□□□□□ -0.47
DDX41-219ENST00000629036 PAPLNO95428 1278 aa12.1□□□□□ -0.47
DDX41-219ENST00000629036 CNPP09543 421 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 1036.9 ms