RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 CCNG2Q16589 344 aa11.72□□□□□ -0.53
VPS8-227ENST00000625842 TLK2Q86UE8 772 aa11.72□□□□□ -0.53
VPS8-227ENST00000625842 BMP10O95393 424 aa11.72□□□□□ -0.53
VPS8-227ENST00000625842 FGBP02675 491 aa11.72□□□□□ -0.53
VPS8-227ENST00000625842 KRT20P35900 424 aa11.72□□□□□ -0.53
VPS8-227ENST00000625842 PPP4CP60510 307 aa11.72□□□□□ -0.53
VPS8-227ENST00000625842 UGP2Q16851 508 aa11.72□□□□□ -0.53
VPS8-227ENST00000625842 KNOP1Q1ED39 458 aaKnown RBP11.72□□□□□ -0.53
VPS8-227ENST00000625842 MCOLN3Q8TDD5 553 aa11.72□□□□□ -0.53
VPS8-227ENST00000625842 RAD54LQ92698 747 aa11.72□□□□□ -0.53
VPS8-227ENST00000625842 PPP1R16AQ96I34 528 aa11.72□□□□□ -0.53
VPS8-227ENST00000625842 ZNF512BQ96KM6 892 aaPredicted RBP11.72□□□□□ -0.53
VPS8-227ENST00000625842 USP28Q96RU2 1077 aa11.72□□□□□ -0.53
VPS8-227ENST00000625842 CIPCQ9C0C6 399 aa11.72□□□□□ -0.53
VPS8-227ENST00000625842 EHD4Q9H223 541 aa11.72□□□□□ -0.53
VPS8-227ENST00000625842 KLHL11Q9NVR0 708 aa11.72□□□□□ -0.53
VPS8-227ENST00000625842 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.72□□□□□ -0.53
VPS8-227ENST00000625842 RWDD2AQ9UIY3 292 aa11.72□□□□□ -0.53
VPS8-227ENST00000625842 KIF1BO60333 1816 aa11.72□□□□□ -0.53
VPS8-227ENST00000625842 GNL1P36915 607 aaPredicted RBP11.71□□□□□ -0.53
VPS8-227ENST00000625842 OCRLQ01968 901 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 APBA1Q02410 837 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 PTH1RQ03431 593 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 TWF1Q12792 350 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 ITPK1Q13572 414 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 PTGISQ16647 500 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 PKN3Q6P5Z2 889 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 MMS22LQ6ZRQ5 1243 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 FBXO33Q7Z6M2 555 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 CALML6Q8TD86 181 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 SUSD6Q92537 303 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 SYT17Q9BSW7 474 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 DHX35Q9H5Z1 703 aaKnown RBP11.71□□□□□ -0.53
VPS8-227ENST00000625842 AIPL1Q9NZN9 384 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 LNPEPQ9UIQ6 1025 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 TMX2Q9Y320 296 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 ENC1O14682 589 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 THOP1P52888 689 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 NPEPPSP55786 919 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 ATG16L1Q676U5 607 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 PPHLN1Q8NEY8 458 aaKnown RBP11.71□□□□□ -0.53
VPS8-227ENST00000625842 LRRC8CQ8TDW0 803 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 GPR63Q9BZJ6 419 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 TRIM15Q9C019 465 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 ABCG4Q9H172 646 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 FBXO44Q9H4M3 255 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 TRPV2Q9Y5S1 764 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 A0A087WZ62 844 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 UBA6A0AVT1 1052 aaPredicted RBP11.71□□□□□ -0.53
VPS8-227ENST00000625842 H3BRB1 525 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 ADCY6O43306 1168 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 SERPIND1P05546 499 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 SULT1E1P49888 294 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 KIF23Q02241 960 aaPredicted RBP11.71□□□□□ -0.53
VPS8-227ENST00000625842 PHLDB3Q6NSJ2 640 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 SYT10Q6XYQ8 523 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 ELOA2Q8IYF1 753 aaPredicted RBP11.71□□□□□ -0.53
VPS8-227ENST00000625842 TSPAN17Q96FV3 270 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 SPACA7Q96KW9 195 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 KIAA1683Q9H0B3 1180 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 UNC45AQ9H3U1 944 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 TUT1Q9H6E5 874 aaKnown RBP11.71□□□□□ -0.53
VPS8-227ENST00000625842 PCDHB5Q9Y5E4 795 aa11.71□□□□□ -0.53
VPS8-227ENST00000625842 SMIM24O75264 130 aa11.71□□□□□ -0.54
VPS8-227ENST00000625842 HMBSP08397 361 aa11.71□□□□□ -0.54
VPS8-227ENST00000625842 FSTL1Q12841 308 aa11.71□□□□□ -0.54
VPS8-227ENST00000625842 SLMAPQ14BN4 828 aa11.71□□□□□ -0.54
VPS8-227ENST00000625842 METTL7BQ6UX53 244 aa11.71□□□□□ -0.54
VPS8-227ENST00000625842 USP38Q8NB14 1042 aa11.71□□□□□ -0.54
VPS8-227ENST00000625842 DDI1Q8WTU0 396 aa11.71□□□□□ -0.54
VPS8-227ENST00000625842 CCDC3Q9BQI4 270 aa11.71□□□□□ -0.54
VPS8-227ENST00000625842 KLHL3Q9UH77 587 aa11.71□□□□□ -0.54
VPS8-227ENST00000625842 CDV3Q9UKY7 258 aaKnown RBP11.71□□□□□ -0.54
VPS8-227ENST00000625842 RGS12O14924 1447 aa11.71□□□□□ -0.54
VPS8-227ENST00000625842 EFCAB8A8MWE9 144 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 DFFAO00273 331 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 CDC27P30260 824 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 HPCAP84074 193 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 AARS2Q5JTZ9 985 aaKnown RBP11.7□□□□□ -0.54
VPS8-227ENST00000625842 MAP3K14Q99558 947 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 CNOT8Q9UFF9 292 aaKnown RBP11.7□□□□□ -0.54
VPS8-227ENST00000625842 ADGBQ8N7X0 1667 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 CFAP69A5D8W1 941 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 LCP1P13796 627 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 CTSEP14091 401 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 GUCY2CP25092 1073 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 ARL4CP56559 192 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 C21orf59P57076 290 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 TMEM62Q0P6H9 643 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 MFSD4BQ5TF39 518 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 FBXW10Q5XX13 1052 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 PSRC1Q6PGN9 363 aaPredicted RBP11.7□□□□□ -0.54
VPS8-227ENST00000625842 C18orf8Q96DM3 657 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 SHDQ96IW2 340 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 AFF4Q9UHB7 1163 aaKnown RBP11.7□□□□□ -0.54
VPS8-227ENST00000625842 DNAJC12Q9UKB3 198 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 NDUFS3O75489 264 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 ZBTB48P10074 688 aaPredicted RBP11.7□□□□□ -0.54
VPS8-227ENST00000625842 ZNF75DP51815 510 aa11.7□□□□□ -0.54
VPS8-227ENST00000625842 IL9RQ01113 521 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms