RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 HYAL3O43820 417 aaPredicted RBP15.46■□□□□ 0.07
SNX1-214ENST00000625244 CCDC192P0DO97 292 aa15.46■□□□□ 0.07
SNX1-214ENST00000625244 AXLP30530 894 aa15.46■□□□□ 0.07
SNX1-214ENST00000625244 NUCB1Q02818 461 aa15.46■□□□□ 0.07
SNX1-214ENST00000625244 DGKKQ5KSL6 1271 aa15.46■□□□□ 0.07
SNX1-214ENST00000625244 DAB2IPQ5VWQ8 1189 aa15.46■□□□□ 0.07
SNX1-214ENST00000625244 PDXDC1Q6P996 788 aa15.46■□□□□ 0.07
SNX1-214ENST00000625244 B3GNT9Q6UX72 402 aa15.46■□□□□ 0.07
SNX1-214ENST00000625244 DEPDC1BQ8WUY9 529 aa15.46■□□□□ 0.07
SNX1-214ENST00000625244 SLC7A3Q8WY07 619 aa15.46■□□□□ 0.07
SNX1-214ENST00000625244 CCDC136Q96JN2 1154 aa15.46■□□□□ 0.07
SNX1-214ENST00000625244 ZC3H10Q96K80 434 aaKnown RBP15.46■□□□□ 0.07
SNX1-214ENST00000625244 TRIM6Q9C030 488 aaPredicted RBP15.46■□□□□ 0.07
SNX1-214ENST00000625244 ZMYND12Q9H0C1 365 aa15.46■□□□□ 0.07
SNX1-214ENST00000625244 BMP2KQ9NSY1 1161 aaPredicted RBP15.46■□□□□ 0.07
SNX1-214ENST00000625244 GPSM3Q9Y4H4 160 aa15.46■□□□□ 0.07
SNX1-214ENST00000625244 NEUROG3Q9Y4Z2 214 aa15.46■□□□□ 0.07
SNX1-214ENST00000625244 RBM8AQ9Y5S9 174 aaKnown RBP15.46■□□□□ 0.07
SNX1-214ENST00000625244 CACNA1EQ15878 2313 aa15.46■□□□□ 0.07
SNX1-214ENST00000625244 VWA8A3KMH1 1905 aa15.45■□□□□ 0.06
SNX1-214ENST00000625244 ADAMTS20P59510 1910 aa15.45■□□□□ 0.06
SNX1-214ENST00000625244 MICAL2O94851 1124 aa15.45■□□□□ 0.06
SNX1-214ENST00000625244 IGFBP6P24592 240 aaPredicted RBP15.45■□□□□ 0.06
SNX1-214ENST00000625244 KPNA1P52294 538 aaPredicted RBP15.45■□□□□ 0.06
SNX1-214ENST00000625244 TUSC3Q13454 348 aa15.45■□□□□ 0.06
SNX1-214ENST00000625244 CCINQ13939 588 aa15.45■□□□□ 0.06
SNX1-214ENST00000625244 AMHR2Q16671 573 aa15.45■□□□□ 0.06
SNX1-214ENST00000625244 RTN1Q16799 776 aa15.45■□□□□ 0.06
SNX1-214ENST00000625244 PLK5Q496M5 336 aa15.45■□□□□ 0.06
SNX1-214ENST00000625244 PKN3Q6P5Z2 889 aa15.45■□□□□ 0.06
SNX1-214ENST00000625244 APOA5Q6Q788 366 aa15.45■□□□□ 0.06
SNX1-214ENST00000625244 PDZD3Q86UT5 571 aa15.45■□□□□ 0.06
SNX1-214ENST00000625244 CDR2LQ86X02 465 aaPredicted RBP15.45■□□□□ 0.06
SNX1-214ENST00000625244 MFSD6LQ8IWD5 586 aa15.45■□□□□ 0.06
SNX1-214ENST00000625244 HACE1Q8IYU2 909 aa15.45■□□□□ 0.06
SNX1-214ENST00000625244 CSGALNACT1Q8TDX6 532 aa15.45■□□□□ 0.06
SNX1-214ENST00000625244 MSANTD3Q96H12 275 aa15.45■□□□□ 0.06
SNX1-214ENST00000625244 DHX33Q9H6R0 707 aaKnown RBP15.45■□□□□ 0.06
SNX1-214ENST00000625244 MTRRQ9UBK8 725 aa15.45■□□□□ 0.06
SNX1-214ENST00000625244 PARP2Q9UGN5 583 aa15.45■□□□□ 0.06
SNX1-214ENST00000625244 KLK13Q9UKR3 277 aa15.45■□□□□ 0.06
SNX1-214ENST00000625244 MSRB2Q9Y3D2 182 aa15.45■□□□□ 0.06
SNX1-214ENST00000625244 TENM4Q6N022 2769 aa15.45■□□□□ 0.06
SNX1-214ENST00000625244 ESYT2A0FGR8 921 aa15.44■□□□□ 0.06
SNX1-214ENST00000625244 LNP1A1A4G5 178 aa15.44■□□□□ 0.06
SNX1-214ENST00000625244 ARHGEF37A1IGU5 675 aa15.44■□□□□ 0.06
SNX1-214ENST00000625244 HEPACAM2A8MVW5 462 aa15.44■□□□□ 0.06
SNX1-214ENST00000625244 ZNF197O14709 1029 aa15.44■□□□□ 0.06
SNX1-214ENST00000625244 MOSPD3O75425 235 aa15.44■□□□□ 0.06
SNX1-214ENST00000625244 NPTXRO95502 500 aa15.44■□□□□ 0.06
SNX1-214ENST00000625244 LRG1P02750 347 aa15.44■□□□□ 0.06
SNX1-214ENST00000625244 ARF4P18085 180 aaPredicted RBP15.44■□□□□ 0.06
SNX1-214ENST00000625244 CSRP1P21291 193 aaKnown RBP15.44■□□□□ 0.06
SNX1-214ENST00000625244 FGFR3P22607 806 aa15.44■□□□□ 0.06
SNX1-214ENST00000625244 CHMLP26374 656 aa15.44■□□□□ 0.06
SNX1-214ENST00000625244 SPIRE1Q08AE8 756 aa15.44■□□□□ 0.06
SNX1-214ENST00000625244 ELAVL2Q12926 359 aaKnown RBP15.44■□□□□ 0.06
SNX1-214ENST00000625244 PFKFB3Q16875 520 aaPredicted RBP15.44■□□□□ 0.06
SNX1-214ENST00000625244 C1orf228Q6PIY5 440 aa15.44■□□□□ 0.06
SNX1-214ENST00000625244 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.44■□□□□ 0.06
SNX1-214ENST00000625244 SYNE3Q6ZMZ3 975 aa15.44■□□□□ 0.06
SNX1-214ENST00000625244 FERMT3Q86UX7 667 aa15.44■□□□□ 0.06
SNX1-214ENST00000625244 TTC8Q8TAM2 541 aa15.44■□□□□ 0.06
SNX1-214ENST00000625244 RUFY2Q8WXA3 655 aa15.44■□□□□ 0.06
SNX1-214ENST00000625244 RSPRY1Q96DX4 576 aa15.44■□□□□ 0.06
SNX1-214ENST00000625244 BBC3Q96PG8 261 aaPredicted RBP15.44■□□□□ 0.06
SNX1-214ENST00000625244 CXCL16Q9H2A7 254 aa15.44■□□□□ 0.06
SNX1-214ENST00000625244 C8orf33Q9H7E9 229 aaPredicted RBP15.44■□□□□ 0.06
SNX1-214ENST00000625244 TRPV4Q9HBA0 871 aa15.44■□□□□ 0.06
SNX1-214ENST00000625244 C6orf50Q9HD87 102 aa15.44■□□□□ 0.06
SNX1-214ENST00000625244 CCDC163A0A0D9SF12 145 aa15.43■□□□□ 0.06
SNX1-214ENST00000625244 MYBPHLA2RUH7 354 aa15.43■□□□□ 0.06
SNX1-214ENST00000625244 SPECC1L-ADORA2AF8WAN1 911 aa15.43■□□□□ 0.06
SNX1-214ENST00000625244 AKAP3O75969 853 aa15.43■□□□□ 0.06
SNX1-214ENST00000625244 CAVIN2O95810 425 aa15.43■□□□□ 0.06
SNX1-214ENST00000625244 GSPT1P15170 499 aaKnown RBP15.43■□□□□ 0.06
SNX1-214ENST00000625244 GJA1P17302 382 aa15.43■□□□□ 0.06
SNX1-214ENST00000625244 CTHP32929 405 aa15.43■□□□□ 0.06
SNX1-214ENST00000625244 PTENP60484 403 aa15.43■□□□□ 0.06
SNX1-214ENST00000625244 PSMC5P62195 406 aa15.43■□□□□ 0.06
SNX1-214ENST00000625244 NCBP1Q09161 790 aaKnown RBP15.43■□□□□ 0.06
SNX1-214ENST00000625244 AAMPQ13685 434 aa15.43■□□□□ 0.06
SNX1-214ENST00000625244 PON2Q15165 354 aa15.43■□□□□ 0.06
SNX1-214ENST00000625244 PCBP1Q15365 356 aaKnown RBP eCLIP15.43■□□□□ 0.06
SNX1-214ENST00000625244 PDZD4Q76G19 769 aaPredicted RBP15.43■□□□□ 0.06
SNX1-214ENST00000625244 PROSER1Q86XN7 944 aa15.43■□□□□ 0.06
SNX1-214ENST00000625244 HS6ST3Q8IZP7 471 aa15.43■□□□□ 0.06
SNX1-214ENST00000625244 ZSCAN18Q8TBC5 510 aaPredicted RBP15.43■□□□□ 0.06
SNX1-214ENST00000625244 CEP170P1Q96L14 293 aa15.43■□□□□ 0.06
SNX1-214ENST00000625244 DUSP15Q9H1R2 295 aaPredicted RBP15.43■□□□□ 0.06
SNX1-214ENST00000625244 BRPF3Q9ULD4 1205 aa15.43■□□□□ 0.06
SNX1-214ENST00000625244 ZMYM2Q9UBW7 1377 aa15.42■□□□□ 0.06
SNX1-214ENST00000625244 INO80B-WBP1J3KQ70 363 aa15.42■□□□□ 0.06
SNX1-214ENST00000625244 CDX4O14627 284 aaPredicted RBP15.42■□□□□ 0.06
SNX1-214ENST00000625244 PTGESO14684 152 aa15.42■□□□□ 0.06
SNX1-214ENST00000625244 SGSM2O43147 1006 aa15.42■□□□□ 0.06
SNX1-214ENST00000625244 ASAP2O43150 1006 aa15.42■□□□□ 0.06
SNX1-214ENST00000625244 B4GALT5O43286 388 aa15.42■□□□□ 0.06
SNX1-214ENST00000625244 CAPNS1P04632 268 aa15.42■□□□□ 0.06
SNX1-214ENST00000625244 CDC27P30260 824 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms