RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 ALOX12P18054 663 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 ERVK-21P61565 698 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 EXOSC9Q06265 439 aaKnown RBP9.23□□□□□ -0.93
CDKL5-206ENST00000623610 EFR3AQ14156 821 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 FAM209AQ5JX71 171 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 JMJD6Q6NYC1 403 aaPredicted RBP9.23□□□□□ -0.93
CDKL5-206ENST00000623610 FAM173BQ6P4H8 233 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 ZYG11AQ6WRX3 759 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 LRRTM4Q86VH4 590 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 RDH13Q8NBN7 331 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 ZFAND2BQ8WV99 257 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 USP7Q93009 1102 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 TRIM47Q96LD4 638 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 HS6ST2Q96MM7 605 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 PSKH2Q96QS6 385 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 RHOXF2Q9BQY4 288 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 IRX2Q9BZI1 471 aaPredicted RBP9.23□□□□□ -0.93
CDKL5-206ENST00000623610 TM9SF3Q9HD45 589 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.23□□□□□ -0.93
CDKL5-206ENST00000623610 INTS7Q9NVH2 962 aaKnown RBP9.23□□□□□ -0.93
CDKL5-206ENST00000623610 HSPBP1Q9NZL4 362 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 FKBPLQ9UIM3 349 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 E2F3O00716 465 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 ZEB2O60315 1214 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 FSBPO95073 299 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 SGPL1O95470 568 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 POLR2MP0CAP2 368 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 RARGP13631 454 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 TARSP26639 723 aaKnown RBP9.23□□□□□ -0.93
CDKL5-206ENST00000623610 PRKAR2BP31323 418 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 MC4RP32245 332 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 BLVRAP53004 296 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 ACTN3Q08043 901 aaPredicted RBP9.23□□□□□ -0.93
CDKL5-206ENST00000623610 SEMA5AQ13591 1074 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 CUL4AQ13619 759 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 ERV3-1Q14264 604 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 ATP2B3Q16720 1220 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 SEZ6Q53EL9 994 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 NAA16Q6N069 864 aaPredicted RBP9.23□□□□□ -0.93
CDKL5-206ENST00000623610 KLC3Q6P597 504 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 MAMDC2Q7Z304 686 aaPredicted RBP9.23□□□□□ -0.93
CDKL5-206ENST00000623610 AGBL5Q8NDL9 886 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 HSPH1Q92598 858 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 NKD1Q969G9 470 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 CCDC74BQ96LY2 380 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 MENTQ9BUN1 341 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 SORBS1Q9BX66 1292 aaKnown RBP9.23□□□□□ -0.93
CDKL5-206ENST00000623610 NT5C3AQ9H0P0 336 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 C8orf33Q9H7E9 229 aaPredicted RBP9.23□□□□□ -0.93
CDKL5-206ENST00000623610 POLKQ9UBT6 870 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 RPS6KA6Q9UK32 745 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 PCDHGB2Q9Y5G2 931 aa9.23□□□□□ -0.93
CDKL5-206ENST00000623610 RTL1A6NKG5 1358 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 FLT4P35916 1363 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 KPNA5O15131 536 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 ZW10O43264 779 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 IGFBP4P22692 258 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 PDIA3P30101 505 aaKnown RBP9.22□□□□□ -0.93
CDKL5-206ENST00000623610 PIK3CBP42338 1070 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 CUL4BQ13620 913 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 CWF19L2Q2TBE0 894 aaKnown RBP9.22□□□□□ -0.93
CDKL5-206ENST00000623610 YOD1Q5VVQ6 348 aaPredicted RBP9.22□□□□□ -0.93
CDKL5-206ENST00000623610 ISLR2Q6UXK2 745 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 ZNF771Q7L3S4 317 aaPredicted RBP9.22□□□□□ -0.93
CDKL5-206ENST00000623610 RNF10Q8N5U6 811 aaKnown RBP9.22□□□□□ -0.93
CDKL5-206ENST00000623610 OR56B2PQ8NGI1 322 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 EXOC6Q8TAG9 804 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 GDAP1Q8TB36 358 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 EDEM1Q92611 657 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 ATP2A3Q93084 1043 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 PTP4A1Q93096 173 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 BCL7BQ9BQE9 202 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 MTMR12Q9C0I1 747 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 IFT22Q9H7X7 185 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 PARVGQ9HBI0 331 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 KRT84Q9NSB2 600 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 FETUBQ9UGM5 382 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 CROTQ9UKG9 612 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 TRIM33Q9UPN9 1127 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 WNK3Q9BYP7 1800 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 INSRP06213 1382 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 SEC22BO75396 215 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 ALDH1A2O94788 518 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 IFNB1P01574 187 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 CSTBP04080 98 aaKnown RBP9.22□□□□□ -0.93
CDKL5-206ENST00000623610 CSF2RAP15509 400 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 TLX1P31314 330 aaPredicted RBP9.22□□□□□ -0.93
CDKL5-206ENST00000623610 NRG1Q02297 640 aaPredicted RBP9.22□□□□□ -0.93
CDKL5-206ENST00000623610 C19orf57Q0VDD7 668 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 LRP8Q14114 963 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 LASP1Q14847 261 aaKnown RBP9.22□□□□□ -0.93
CDKL5-206ENST00000623610 WDR43Q15061 677 aaKnown RBP eCLIP9.22□□□□□ -0.93
CDKL5-206ENST00000623610 TLR1Q15399 786 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 IYDQ6PHW0 289 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 SLC22A25Q6T423 547 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 NLRC3Q7RTR2 1065 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 LUZP1Q86V48 1076 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 HID1Q8IV36 788 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 FAM178BQ8IXR5 827 aa9.22□□□□□ -0.93
CDKL5-206ENST00000623610 CDKL2Q92772 493 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms