RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 ASAP3Q8TDY4 903 aa8.91□□□□□ -0.98
SND1-IT1-201ENST00000623342 TRIM11Q96F44 468 aa8.91□□□□□ -0.98
SND1-IT1-201ENST00000623342 PLVAPQ9BX97 442 aa8.91□□□□□ -0.98
SND1-IT1-201ENST00000623342 TSPYL1Q9H0U9 437 aa8.91□□□□□ -0.98
SND1-IT1-201ENST00000623342 AVENQ9NQS1 362 aaPredicted RBP8.91□□□□□ -0.98
SND1-IT1-201ENST00000623342 PARP2Q9UGN5 583 aa8.91□□□□□ -0.98
SND1-IT1-201ENST00000623342 SNX24Q9Y343 169 aa8.91□□□□□ -0.98
SND1-IT1-201ENST00000623342 LCTP09848 1927 aa8.91□□□□□ -0.98
SND1-IT1-201ENST00000623342 SSC5DA1L4H1 1573 aa8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 MYH9P35579 1960 aaKnown RBP8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 ZNFX1Q9P2E3 1918 aaKnown RBP8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 DCAF8L1A6NGE4 600 aa8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 LRRIQ4A6NIV6 560 aa8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 K7ERI5 159 aa8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 LDHAP00338 332 aaKnown RBP8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 MYBL1P10243 752 aa8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 MAPK4P31152 587 aa8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 HPDP32754 393 aaPredicted RBP8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 ARL2P36404 184 aa8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 PIK3CAP42336 1068 aa8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 ACOT2P49753 483 aa8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 PLTPP55058 493 aa8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 CNTN2Q02246 1040 aa8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 TDRD10Q5VZ19 366 aaKnown RBP8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 ZDHHC24Q6UX98 284 aa8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 SEPT14Q6ZU15 432 aa8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 MCOLN2Q8IZK6 566 aa8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 ZNF526Q8TF50 670 aaPredicted RBP8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 SLC7A3Q8WY07 619 aa8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 UPF1Q92900 1129 aaKnown RBP eCLIP8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 FAM84AQ96KN4 292 aa8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 NIFKQ9BYG3 293 aaKnown RBP8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 EPN3Q9H201 632 aa8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 RABEP2Q9H5N1 569 aa8.9□□□□□ -0.98
SND1-IT1-201ENST00000623342 IGKV6D-21A0A0A0MT36 114 aa8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 TCRBV7S2A1N4TA0A589 114 aa8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 NDUFAB1O14561 156 aa8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 CALCAP01258 141 aa8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 RARAP10276 462 aa8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 COILP38432 576 aaPredicted RBP8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 RFC5P40937 340 aa8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 FNTAP49354 379 aa8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 ALDH5A1P51649 535 aaPredicted RBP8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 PMS2P54278 862 aa8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 WNT7BP56706 349 aa8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 IFFO1Q0D2I5 559 aa8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 FSTL1Q12841 308 aa8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 KRT71Q3SY84 523 aa8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 CRELD2Q6UXH1 353 aaPredicted RBP8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 CCDC105Q8IYK2 499 aa8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 C12orf50Q8NA57 414 aaPredicted RBP8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 FBXO25Q8TCJ0 367 aa8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 HAPLN2Q9GZV7 340 aa8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 FAM107BQ9H098 131 aa8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 RBAKQ9NYW8 714 aaPredicted RBP8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 GPRC5DQ9NZD1 345 aa8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 GRHL1Q9NZI5 618 aa8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 BCCIPQ9P287 314 aaKnown RBP eCLIP8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 ANAPC7Q9UJX3 599 aa8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 CD2APQ9Y5K6 639 aa8.9□□□□□ -0.99
SND1-IT1-201ENST00000623342 SRRM3A6NNA2 597 aaPredicted RBP8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 VNN1O95497 513 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 RPL21P46778 160 aaKnown RBP8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 CORO7P57737 925 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 IRX5P78411 483 aaPredicted RBP8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 CENPCQ03188 943 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 CUL2Q13617 745 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 PRKG1Q13976 671 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 SIX1Q15475 284 aaPredicted RBP8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 PTGISQ16647 500 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 CPA5Q8WXQ8 436 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 ZBTB45Q96K62 511 aaPredicted RBP8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 CEP89Q96ST8 783 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 MSTO1Q9BUK6 570 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 PABPC3Q9H361 631 aaKnown RBP8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 TMEM134Q9H6X4 195 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 LRRC19Q9H756 370 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 MTRF1LQ9UGC7 380 aaKnown RBP8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 FBXO40Q9UH90 709 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 WDR90Q96KV7 1748 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 SIP14410 1827 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 PTPRJQ12913 1337 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 MROH7Q68CQ1 1323 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 PASKQ96RG2 1323 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 A0A0B4J269 797 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 FSCN2O14926 492 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 PEX10O60683 326 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 USP2O75604 605 aaPredicted RBP8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 CYP1A1P04798 512 aaPredicted RBP8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 NUDT17P0C025 328 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 ACO1P21399 889 aaKnown RBP8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 UBA1P22314 1058 aaKnown RBP8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 RRM1P23921 792 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 SLC1A1P43005 524 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 NSFP46459 744 aaKnown RBP8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 ODF2Q5BJF6 829 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 SPOPLQ6IQ16 392 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 LBX2Q6XYB7 198 aa8.89□□□□□ -0.99
SND1-IT1-201ENST00000623342 TRIM72Q6ZMU5 477 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms