RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 EXOC3O60645 756 aa15.03■□□□□ -0
LDB3-209ENST00000623056 ADCY8P40145 1251 aa15.03■□□□□ -0
LDB3-209ENST00000623056 RASSF2P50749 326 aa15.03■□□□□ -0
LDB3-209ENST00000623056 DLG4P78352 724 aa15.03■□□□□ -0
LDB3-209ENST00000623056 NFIXQ14938 502 aa15.03■□□□□ -0
LDB3-209ENST00000623056 FAM196AQ6ZSG2 479 aa15.03■□□□□ -0
LDB3-209ENST00000623056 C1orf186Q6ZWK4 172 aa15.03■□□□□ -0
LDB3-209ENST00000623056 ZNF720Q7Z2F6 126 aa15.03■□□□□ -0
LDB3-209ENST00000623056 NOP9Q86U38 636 aaKnown RBP15.03■□□□□ -0
LDB3-209ENST00000623056 GALNT15Q8N3T1 639 aa15.03■□□□□ -0
LDB3-209ENST00000623056 FAM136AQ96C01 138 aa15.03■□□□□ -0
LDB3-209ENST00000623056 ZNF653Q96CK0 615 aa15.03■□□□□ -0
LDB3-209ENST00000623056 DLGAP2Q9P1A6 1054 aa15.03■□□□□ -0
LDB3-209ENST00000623056 NOCTQ9UK39 431 aaKnown RBP15.03■□□□□ -0
LDB3-209ENST00000623056 TRAFD1O14545 582 aaPredicted RBP15.03■□□□□ -0
LDB3-209ENST00000623056 GAS8O95995 478 aa15.03■□□□□ -0
LDB3-209ENST00000623056 GZMAP12544 262 aa15.03■□□□□ -0
LDB3-209ENST00000623056 RFC5P40937 340 aa15.03■□□□□ -0
LDB3-209ENST00000623056 RPS6KA3P51812 740 aa15.03■□□□□ -0
LDB3-209ENST00000623056 RGS9BPQ6ZS82 235 aa15.03■□□□□ -0
LDB3-209ENST00000623056 APBB1IPQ7Z5R6 666 aaPredicted RBP15.03■□□□□ -0
LDB3-209ENST00000623056 EPS8L1Q8TE68 723 aa15.03■□□□□ -0
LDB3-209ENST00000623056 DENND1AQ8TEH3 1009 aa15.03■□□□□ -0
LDB3-209ENST00000623056 C10orf82Q8WW14 230 aa15.03■□□□□ -0
LDB3-209ENST00000623056 KAT5Q92993 513 aa15.03■□□□□ -0
LDB3-209ENST00000623056 ZNF333Q96JL9 665 aa15.03■□□□□ -0
LDB3-209ENST00000623056 DCLRE1BQ9H816 532 aa15.03■□□□□ -0
LDB3-209ENST00000623056 NMRK1Q9NWW6 199 aa15.03■□□□□ -0
LDB3-209ENST00000623056 UBE4BO95155 1302 aa15.02■□□□□ -0
LDB3-209ENST00000623056 EMSYQ7Z589 1322 aa15.02■□□□□ -0
LDB3-209ENST00000623056 EDF1O60869 148 aaKnown RBP15.02■□□□□ -0
LDB3-209ENST00000623056 LMNAP02545 664 aaKnown RBP15.02■□□□□ -0
LDB3-209ENST00000623056 MAN1A1P33908 653 aa15.02■□□□□ -0
LDB3-209ENST00000623056 GCLCP48506 637 aaPredicted RBP15.02■□□□□ -0
LDB3-209ENST00000623056 SPARCL1Q14515 664 aa15.02■□□□□ -0
LDB3-209ENST00000623056 NBPF20Q3BBV1 942 aa15.02■□□□□ -0
LDB3-209ENST00000623056 TRABD2AQ86V40 505 aa15.02■□□□□ -0
LDB3-209ENST00000623056 UCMAQ8WVF2 138 aa15.02■□□□□ -0
LDB3-209ENST00000623056 HERPUD2Q9BSE4 406 aa15.02■□□□□ -0
LDB3-209ENST00000623056 PLVAPQ9BX97 442 aa15.02■□□□□ -0
LDB3-209ENST00000623056 DCLK3Q9C098 648 aa15.02■□□□□ -0
LDB3-209ENST00000623056 ACP6Q9NPH0 428 aa15.02■□□□□ -0
LDB3-209ENST00000623056 GRID1Q9ULK0 1009 aa15.02■□□□□ -0
LDB3-209ENST00000623056 RPL26L1Q9UNX3 145 aaKnown RBP15.02■□□□□ -0
LDB3-209ENST00000623056 TAF1LQ8IZX4 1826 aa15.02□□□□□ -0.01
LDB3-209ENST00000623056 GAKO14976 1311 aa15.02□□□□□ -0.01
LDB3-209ENST00000623056 ZBTB39O15060 712 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 NVLO15381 856 aaKnown RBP15.01□□□□□ -0.01
LDB3-209ENST00000623056 RTN3O95197 1032 aaPredicted RBP15.01□□□□□ -0.01
LDB3-209ENST00000623056 RRM1P23921 792 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 PTPN4P29074 926 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 TRAF1Q13077 416 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 TAF1BQ53T94 588 aaPredicted RBP15.01□□□□□ -0.01
LDB3-209ENST00000623056 IRGCQ6NXR0 463 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 FAM178BQ8IXR5 827 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 GRK7Q8WTQ7 553 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 ZFAND2BQ8WV99 257 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 VTI1AQ96AJ9 217 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 FAM163AQ96GL9 167 aaPredicted RBP15.01□□□□□ -0.01
LDB3-209ENST00000623056 TLE6Q9H808 572 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 CD209Q9NNX6 404 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 GTF3C4Q9UKN8 822 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 LY75O60449 1722 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 MROH7Q68CQ1 1323 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 SIGLEC16A6NMB1 481 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 RAD21O60216 631 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 MUTP22033 750 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 MARK3P27448 753 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 PPP3CAQ08209 521 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 PDK4Q16654 411 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 KHDC1Q4VXA5 237 aaKnown RBP15.01□□□□□ -0.01
LDB3-209ENST00000623056 PPP1R15BQ5SWA1 713 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 RNF220Q5VTB9 566 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 OR52E8Q6IFG1 317 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 RFWD3Q6PCD5 774 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 SLC47A2Q86VL8 602 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 TPH2Q8IWU9 490 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 RIBC1Q8N443 379 aaPredicted RBP15.01□□□□□ -0.01
LDB3-209ENST00000623056 CYP2W1Q8TAV3 490 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 LRRC8CQ8TDW0 803 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 VCXQ9H320 206 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 WDR35Q9P2L0 1181 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 UVRAGQ9P2Y5 699 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 STOML1Q9UBI4 398 aa15.01□□□□□ -0.01
LDB3-209ENST00000623056 GSTTP1A0A1W2PQM5 241 aa15□□□□□ -0.01
LDB3-209ENST00000623056 PRPF4O43172 522 aaKnown RBP eCLIP15□□□□□ -0.01
LDB3-209ENST00000623056 ECE2O60344 883 aa15□□□□□ -0.01
LDB3-209ENST00000623056 RXRBP28702 533 aa15□□□□□ -0.01
LDB3-209ENST00000623056 VHLP40337 213 aa15□□□□□ -0.01
LDB3-209ENST00000623056 SESN3P58005 492 aa15□□□□□ -0.01
LDB3-209ENST00000623056 FMO1Q01740 532 aa15□□□□□ -0.01
LDB3-209ENST00000623056 EPC2Q52LR7 807 aa15□□□□□ -0.01
LDB3-209ENST00000623056 MFSD14BQ5SR56 506 aa15□□□□□ -0.01
LDB3-209ENST00000623056 CYP4F22Q6NT55 531 aa15□□□□□ -0.01
LDB3-209ENST00000623056 MTHFD1LQ6UB35 978 aa15□□□□□ -0.01
LDB3-209ENST00000623056 TPTE2Q6XPS3 522 aa15□□□□□ -0.01
LDB3-209ENST00000623056 C4orf50Q6ZRC1 276 aa15□□□□□ -0.01
LDB3-209ENST00000623056 STXBP4Q6ZWJ1 553 aa15□□□□□ -0.01
LDB3-209ENST00000623056 CCDC125Q86Z20 511 aa15□□□□□ -0.01
LDB3-209ENST00000623056 HSD17B14Q9BPX1 270 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms