RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 PTPN14Q15678 1187 aa15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 NAB2Q15742 525 aa15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 SLC10A6Q3KNW5 377 aa15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 USP41Q3LFD5 358 aa15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 PUS10Q3MIT2 529 aaKnown RBP15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 XKR4Q5GH76 650 aa15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 FAM26FQ5R3K3 315 aa15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 ZBTB41Q5SVQ8 909 aa15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 PTCRAQ6ISU1 281 aaPredicted RBP15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 TAS1R1Q7RTX1 841 aa15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 CEP57Q86XR8 500 aa15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 ADAMTS19Q8TE59 1207 aa15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 NOC3LQ8WTT2 800 aaKnown RBP15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 KIF12Q96FN5 646 aa15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 DDX27Q96GQ7 796 aaKnown RBP15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 PAGE5Q96GU1 130 aa15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 ZMAT2Q96NC0 199 aaKnown RBP15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 FGFBP2Q9BYJ0 223 aa15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 GPR62Q9BZJ7 368 aa15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 IKZF4Q9H2S9 585 aa15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 PLEKHA5Q9HAU0 1116 aa15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 CD207Q9UJ71 328 aa15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 FAM50BQ9Y247 325 aa15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 HPSEQ9Y251 543 aa15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 IRAK3Q9Y616 596 aa15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 TRIP11Q15643 1979 aa15.22■□□□□ 0.03
PCDHGC3-208ENST00000622836 PODXLO00592 558 aa15.21■□□□□ 0.03
PCDHGC3-208ENST00000622836 XPOTO43592 962 aaKnown RBP15.21■□□□□ 0.03
PCDHGC3-208ENST00000622836 CLASP2O75122 1294 aaKnown RBP15.21■□□□□ 0.03
PCDHGC3-208ENST00000622836 LTBRP36941 435 aa15.21■□□□□ 0.03
PCDHGC3-208ENST00000622836 ACOT2P49753 483 aa15.21■□□□□ 0.03
PCDHGC3-208ENST00000622836 RBM10P98175 930 aaKnown RBP15.21■□□□□ 0.03
PCDHGC3-208ENST00000622836 SPAG1Q07617 926 aa15.21■□□□□ 0.03
PCDHGC3-208ENST00000622836 ELAVL2Q12926 359 aaKnown RBP15.21■□□□□ 0.03
PCDHGC3-208ENST00000622836 CNNM4Q6P4Q7 775 aa15.21■□□□□ 0.03
PCDHGC3-208ENST00000622836 DCLRE1AQ6PJP8 1040 aa15.21■□□□□ 0.03
PCDHGC3-208ENST00000622836 PPFIBP1Q86W92 1011 aa15.21■□□□□ 0.03
PCDHGC3-208ENST00000622836 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.21■□□□□ 0.03
PCDHGC3-208ENST00000622836 CASP10Q92851 521 aa15.21■□□□□ 0.03
PCDHGC3-208ENST00000622836 C18orf25Q96B23 403 aaPredicted RBP15.21■□□□□ 0.03
PCDHGC3-208ENST00000622836 CCDC34Q96HJ3 373 aa15.21■□□□□ 0.03
PCDHGC3-208ENST00000622836 B3GALT6Q96L58 329 aa15.21■□□□□ 0.03
PCDHGC3-208ENST00000622836 STRA6Q9BX79 667 aa15.21■□□□□ 0.03
PCDHGC3-208ENST00000622836 EXOC1Q9NV70 894 aa15.21■□□□□ 0.03
PCDHGC3-208ENST00000622836 CIZ1Q9ULV3 898 aaPredicted RBP15.21■□□□□ 0.03
PCDHGC3-208ENST00000622836 NUB1Q9Y5A7 615 aa15.21■□□□□ 0.03
PCDHGC3-208ENST00000622836 XIRP2A4UGR9 3374 aa15.21■□□□□ 0.03
PCDHGC3-208ENST00000622836 PVALEFA0A1B0GWK0 134 aa15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 LACTBL1A8MY62 500 aa15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 DLL1O00548 723 aa15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 TRAPPC3O43617 180 aa15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 GLP2RO95838 553 aa15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 ADH1AP07327 375 aa15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 BMP1P13497 986 aa15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 DSG1Q02413 1049 aa15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 SOX4Q06945 474 aaPredicted RBP15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 ENOX2Q16206 610 aaKnown RBP15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 UPP1Q16831 310 aa15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 FAM171A1Q5VUB5 890 aa15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 ARMCX5Q6P1M9 558 aa15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 CD302Q8IX05 232 aa15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 RNF168Q8IYW5 571 aaPredicted RBP15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 GLIS3Q8NEA6 775 aa15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 VN1R2Q8NFZ6 395 aa15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 RIN2Q8WYP3 895 aaPredicted RBP15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 CCDC47Q96A33 483 aaKnown RBP15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 FAM213AQ9BRX8 229 aa15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 SLC39A2Q9NP94 309 aa15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 CLEC1BQ9P126 229 aa15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 CPSF3Q9UKF6 684 aaKnown RBP15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 HCFC2Q9Y5Z7 792 aa15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 STYXL1Q9Y6J8 313 aa15.2■□□□□ 0.02
PCDHGC3-208ENST00000622836 TTC26A0AVF1 554 aa15.19■□□□□ 0.02
PCDHGC3-208ENST00000622836 EIF3DO15371 548 aaKnown RBP eCLIP15.19■□□□□ 0.02
PCDHGC3-208ENST00000622836 MEFVO15553 781 aaPredicted RBP15.19■□□□□ 0.02
PCDHGC3-208ENST00000622836 FAM189A1O60320 539 aa15.19■□□□□ 0.02
PCDHGC3-208ENST00000622836 MYL1P05976 194 aa15.19■□□□□ 0.02
PCDHGC3-208ENST00000622836 CNPP09543 421 aaKnown RBP15.19■□□□□ 0.02
PCDHGC3-208ENST00000622836 IL9P15248 144 aa15.19■□□□□ 0.02
PCDHGC3-208ENST00000622836 ADSSP30520 456 aa15.19■□□□□ 0.02
PCDHGC3-208ENST00000622836 RPL9P32969 192 aaKnown RBP15.19■□□□□ 0.02
PCDHGC3-208ENST00000622836 CREMQ03060 361 aa15.19■□□□□ 0.02
PCDHGC3-208ENST00000622836 SAAL1Q96ER3 474 aa15.19■□□□□ 0.02
PCDHGC3-208ENST00000622836 KLHL5Q96PQ7 755 aa15.19■□□□□ 0.02
PCDHGC3-208ENST00000622836 UHRF1Q96T88 793 aaPredicted RBP15.19■□□□□ 0.02
PCDHGC3-208ENST00000622836 TTPALQ9BTX7 342 aa15.19■□□□□ 0.02
PCDHGC3-208ENST00000622836 APOL5Q9BWW9 433 aa15.19■□□□□ 0.02
PCDHGC3-208ENST00000622836 COL25A1Q9BXS0 654 aaPredicted RBP15.19■□□□□ 0.02
PCDHGC3-208ENST00000622836 GOLPH3LQ9H4A5 285 aa15.19■□□□□ 0.02
PCDHGC3-208ENST00000622836 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.19■□□□□ 0.02
PCDHGC3-208ENST00000622836 TUBGCP4Q9UGJ1 667 aa15.19■□□□□ 0.02
PCDHGC3-208ENST00000622836 UBQLN1Q9UMX0 589 aaKnown RBP15.19■□□□□ 0.02
PCDHGC3-208ENST00000622836 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.19■□□□□ 0.02
PCDHGC3-208ENST00000622836 TCF20Q9UGU0 1960 aaKnown RBP15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 FAM237AA0A1B0GTK4 181 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 GRXCR2A6NFK2 248 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 TMEM189-UBE2V1I3L0A0 370 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 ZNF202O95125 648 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 EFEMP2O95967 443 aa15.18■□□□□ 0.02
PCDHGC3-208ENST00000622836 LDHAP00338 332 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms