RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 CLTAP09496 248 aa17.18■□□□□ 0.34
CBWD3-216ENST00000621396 CYP27A1Q02318 531 aa17.18■□□□□ 0.34
CBWD3-216ENST00000621396 MEA1Q16626 185 aa17.18■□□□□ 0.34
CBWD3-216ENST00000621396 TDRD12Q587J7 1177 aaKnown RBP17.18■□□□□ 0.34
CBWD3-216ENST00000621396 SFMBT2Q5VUG0 894 aa17.18■□□□□ 0.34
CBWD3-216ENST00000621396 CTU1Q7Z7A3 348 aaKnown RBP17.18■□□□□ 0.34
CBWD3-216ENST00000621396 DNAAF5Q86Y56 855 aa17.18■□□□□ 0.34
CBWD3-216ENST00000621396 ZNHIT6Q9NWK9 470 aaKnown RBP17.18■□□□□ 0.34
CBWD3-216ENST00000621396 UMODL1Q5DID0 1318 aa17.18■□□□□ 0.34
CBWD3-216ENST00000621396 A0A0U1RQG5 324 aaPredicted RBP17.18■□□□□ 0.34
CBWD3-216ENST00000621396 FOXN3O00409 490 aaPredicted RBP17.18■□□□□ 0.34
CBWD3-216ENST00000621396 N4BP1O75113 896 aaKnown RBP17.18■□□□□ 0.34
CBWD3-216ENST00000621396 ABL1P00519 1130 aa17.18■□□□□ 0.34
CBWD3-216ENST00000621396 KRT19P08727 400 aa17.18■□□□□ 0.34
CBWD3-216ENST00000621396 CKBP12277 381 aa17.18■□□□□ 0.34
CBWD3-216ENST00000621396 USP8P40818 1118 aa17.18■□□□□ 0.34
CBWD3-216ENST00000621396 TRIM71Q2Q1W2 868 aaKnown RBP17.18■□□□□ 0.34
CBWD3-216ENST00000621396 UBXN11Q5T124 520 aa17.18■□□□□ 0.34
CBWD3-216ENST00000621396 HGSNATQ68CP4 663 aa17.18■□□□□ 0.34
CBWD3-216ENST00000621396 TRAPPC11Q7Z392 1133 aa17.18■□□□□ 0.34
CBWD3-216ENST00000621396 U2AF1L4Q8WU68 220 aaKnown RBP17.18■□□□□ 0.34
CBWD3-216ENST00000621396 KREMEN1Q96MU8 473 aa17.18■□□□□ 0.34
CBWD3-216ENST00000621396 PADI3Q9ULW8 664 aa17.18■□□□□ 0.34
CBWD3-216ENST00000621396 COQ4Q9Y3A0 265 aa17.18■□□□□ 0.34
CBWD3-216ENST00000621396 FRMPD3Q5JV73 1810 aa17.17■□□□□ 0.34
CBWD3-216ENST00000621396 MCCD1P59942 119 aaPredicted RBP17.17■□□□□ 0.34
CBWD3-216ENST00000621396 PTK7Q13308 1070 aa17.17■□□□□ 0.34
CBWD3-216ENST00000621396 TMTC1Q8IUR5 882 aa17.17■□□□□ 0.34
CBWD3-216ENST00000621396 ZMAT2Q96NC0 199 aaKnown RBP17.17■□□□□ 0.34
CBWD3-216ENST00000621396 APOBEC3GQ9HC16 384 aaKnown RBP17.17■□□□□ 0.34
CBWD3-216ENST00000621396 OGDHLQ9ULD0 1010 aa17.17■□□□□ 0.34
CBWD3-216ENST00000621396 F8VZ95 297 aa17.17■□□□□ 0.34
CBWD3-216ENST00000621396 P4HA2O15460 535 aa17.17■□□□□ 0.34
CBWD3-216ENST00000621396 TMEM191BP0C7N4 346 aa17.17■□□□□ 0.34
CBWD3-216ENST00000621396 EIF4A3P38919 411 aaKnown RBP17.17■□□□□ 0.34
CBWD3-216ENST00000621396 JAM2P57087 298 aa17.17■□□□□ 0.34
CBWD3-216ENST00000621396 MYL6P60660 151 aa17.17■□□□□ 0.34
CBWD3-216ENST00000621396 NCOA4Q13772 614 aa17.17■□□□□ 0.34
CBWD3-216ENST00000621396 DUOXA2Q1HG44 320 aa17.17■□□□□ 0.34
CBWD3-216ENST00000621396 WDR49Q8IV35 697 aa17.17■□□□□ 0.34
CBWD3-216ENST00000621396 CCAR2Q8N163 923 aaKnown RBP17.17■□□□□ 0.34
CBWD3-216ENST00000621396 ZNF333Q96JL9 665 aa17.17■□□□□ 0.34
CBWD3-216ENST00000621396 PARP2Q9UGN5 583 aa17.17■□□□□ 0.34
CBWD3-216ENST00000621396 MGEA5O60502 916 aa17.16■□□□□ 0.34
CBWD3-216ENST00000621396 RECQL4O94761 1208 aa17.16■□□□□ 0.34
CBWD3-216ENST00000621396 FECHP22830 423 aa17.16■□□□□ 0.34
CBWD3-216ENST00000621396 GTF2H1P32780 548 aa17.16■□□□□ 0.34
CBWD3-216ENST00000621396 MNX1P50219 401 aaPredicted RBP17.16■□□□□ 0.34
CBWD3-216ENST00000621396 AFF1P51825 1210 aaKnown RBP17.16■□□□□ 0.34
CBWD3-216ENST00000621396 LPIN1Q14693 890 aa17.16■□□□□ 0.34
CBWD3-216ENST00000621396 MBTPS1Q14703 1052 aa17.16■□□□□ 0.34
CBWD3-216ENST00000621396 FBXO47Q5MNV8 452 aa17.16■□□□□ 0.34
CBWD3-216ENST00000621396 MROH7Q68CQ1 1323 aa17.16■□□□□ 0.34
CBWD3-216ENST00000621396 IRF2BP2Q7Z5L9 587 aa17.16■□□□□ 0.34
CBWD3-216ENST00000621396 SLC43A3Q8NBI5 491 aa17.16■□□□□ 0.34
CBWD3-216ENST00000621396 HELQQ8TDG4 1101 aa17.16■□□□□ 0.34
CBWD3-216ENST00000621396 LPPQ93052 612 aa17.16■□□□□ 0.34
CBWD3-216ENST00000621396 C16orf45Q96MC5 204 aaPredicted RBP17.16■□□□□ 0.34
CBWD3-216ENST00000621396 HAUS4Q9H6D7 363 aa17.16■□□□□ 0.34
CBWD3-216ENST00000621396 IPPQ9Y573 584 aa17.16■□□□□ 0.34
CBWD3-216ENST00000621396 SMG8Q8ND04 991 aaKnown RBP17.16■□□□□ 0.34
CBWD3-216ENST00000621396 ZFP42Q96MM3 310 aa17.16■□□□□ 0.34
CBWD3-216ENST00000621396 STK33Q9BYT3 514 aa17.16■□□□□ 0.34
CBWD3-216ENST00000621396 PPP2R2CQ9Y2T4 447 aa17.16■□□□□ 0.34
CBWD3-216ENST00000621396 NUB1Q9Y5A7 615 aa17.16■□□□□ 0.34
CBWD3-216ENST00000621396 EPN1Q9Y6I3 576 aaPredicted RBP17.16■□□□□ 0.34
CBWD3-216ENST00000621396 ZNF263O14978 683 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 EVI5O60447 810 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 NDUFA10O95299 355 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 ITGB3P05106 788 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 HNRNPH3P31942 346 aaKnown RBP17.15■□□□□ 0.34
CBWD3-216ENST00000621396 GRM5P41594 1212 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 PTK2Q05397 1052 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 GFPT1Q06210 699 aaPredicted RBP17.15■□□□□ 0.34
CBWD3-216ENST00000621396 KLHL30Q0D2K2 578 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 FBXO46Q6PJ61 603 aaPredicted RBP17.15■□□□□ 0.34
CBWD3-216ENST00000621396 C1orf127Q8N9H9 656 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 RNF169Q8NCN4 708 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 C18orf25Q96B23 403 aaPredicted RBP17.15■□□□□ 0.34
CBWD3-216ENST00000621396 KIF12Q96FN5 646 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 CCDC42Q96M95 316 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 CCDC94Q9BW85 323 aaPredicted RBP17.15■□□□□ 0.34
CBWD3-216ENST00000621396 DEF6Q9H4E7 631 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 RANBP2P49792 3224 aaKnown RBP17.15■□□□□ 0.34
CBWD3-216ENST00000621396 CDK7P50613 346 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 ASIC2Q16515 512 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 DCAF4L1Q3SXM0 396 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 FAM126BQ8IXS8 530 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 IQCDQ96DY2 449 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 PPP1R13BQ96KQ4 1090 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 NT5C1BQ96P26 610 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.15■□□□□ 0.34
CBWD3-216ENST00000621396 EDEM3Q9BZQ6 932 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 LZTFL1Q9NQ48 299 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 CACNG4Q9UBN1 327 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 ADAMTS1Q9UHI8 967 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 REXO2Q9Y3B8 237 aaKnown RBP17.15■□□□□ 0.34
CBWD3-216ENST00000621396 ADGRG1Q9Y653 693 aa17.15■□□□□ 0.34
CBWD3-216ENST00000621396 PMM2O15305 246 aa17.14■□□□□ 0.33
CBWD3-216ENST00000621396 SGPL1O95470 568 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms